RNA–Protein interactions for RNA: ENST00000561707.1

COTL1-202, Transcript of coactosin like F-actin binding protein 1, humanhuman

TSL 1 (best)

Gene COTL1, Length 781 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COTL1-202ENST00000561707 PCDHGA2Q9Y5H1 932 aa12.5□□□□□ -0.41
COTL1-202ENST00000561707 PRR33A8MZF0 331 aa12.49□□□□□ -0.41
COTL1-202ENST00000561707 PRR5-ARHGAP8B1AHC4 643 aa12.49□□□□□ -0.41
COTL1-202ENST00000561707 PATE3B3GLJ2 98 aa12.49□□□□□ -0.41
COTL1-202ENST00000561707 IFRD1O00458 451 aaPredicted RBP12.49□□□□□ -0.41
COTL1-202ENST00000561707 VIMP08670 466 aaKnown RBP12.49□□□□□ -0.41
COTL1-202ENST00000561707 ANXA5P08758 320 aa12.49□□□□□ -0.41
COTL1-202ENST00000561707 ENO2P09104 434 aaPredicted RBP12.49□□□□□ -0.41
COTL1-202ENST00000561707 HIST1H2AGP0C0S8 130 aaPredicted RBP12.49□□□□□ -0.41
COTL1-202ENST00000561707 HIST1H2ADP20671 130 aa12.49□□□□□ -0.41
COTL1-202ENST00000561707 SLC19A1P41440 591 aa12.49□□□□□ -0.41
COTL1-202ENST00000561707 SLC1A6P48664 564 aa12.49□□□□□ -0.41
COTL1-202ENST00000561707 BLKP51451 505 aa12.49□□□□□ -0.41
COTL1-202ENST00000561707 ALDH18A1P54886 795 aaKnown RBP12.49□□□□□ -0.41
COTL1-202ENST00000561707 CDH13P55290 713 aa12.49□□□□□ -0.41
COTL1-202ENST00000561707 SF3A3Q12874 501 aaKnown RBP eCLIP12.49□□□□□ -0.41
COTL1-202ENST00000561707 BNIP3Q12983 259 aa12.49□□□□□ -0.41
COTL1-202ENST00000561707 SP140Q13342 867 aa12.49□□□□□ -0.41
COTL1-202ENST00000561707 GRB7Q14451 532 aa12.49□□□□□ -0.41
COTL1-202ENST00000561707 SETDB1Q15047 1291 aa12.49□□□□□ -0.41
COTL1-202ENST00000561707 SHBQ15464 509 aa12.49□□□□□ -0.41
COTL1-202ENST00000561707 ZNF678Q5SXM1 525 aa12.49□□□□□ -0.41
COTL1-202ENST00000561707 FAM219BQ5XKK7 198 aa12.49□□□□□ -0.41
COTL1-202ENST00000561707 SULT1C3Q6IMI6 304 aa12.49□□□□□ -0.41
COTL1-202ENST00000561707 UNC5DQ6UXZ4 953 aa12.49□□□□□ -0.41
COTL1-202ENST00000561707 WASH2PQ6VEQ5 465 aa12.49□□□□□ -0.41
COTL1-202ENST00000561707 FAM47EQ6ZV65 393 aa12.49□□□□□ -0.41
COTL1-202ENST00000561707 RAB44Q7Z6P3 723 aaPredicted RBP12.49□□□□□ -0.41
COTL1-202ENST00000561707 LSMEM2Q8N112 164 aa12.49□□□□□ -0.41
COTL1-202ENST00000561707 C2orf73Q8N5S3 287 aaPredicted RBP12.49□□□□□ -0.41
COTL1-202ENST00000561707 PDPRQ8NCN5 879 aa12.49□□□□□ -0.41
COTL1-202ENST00000561707 OR9A1PQ8NGU1 263 aa12.49□□□□□ -0.41
COTL1-202ENST00000561707 PATE1Q8WXA2 126 aa12.49□□□□□ -0.41
COTL1-202ENST00000561707 SKA1Q96BD8 255 aa12.49□□□□□ -0.41
COTL1-202ENST00000561707 CCDC126Q96EE4 140 aa12.49□□□□□ -0.41
COTL1-202ENST00000561707 HIST1H2AHQ96KK5 128 aa12.49□□□□□ -0.41
COTL1-202ENST00000561707 CAMK1GQ96NX5 476 aa12.49□□□□□ -0.41
COTL1-202ENST00000561707 NSUN5Q96P11 429 aaKnown RBP12.49□□□□□ -0.41
COTL1-202ENST00000561707 IL17FQ96PD4 163 aa12.49□□□□□ -0.41
COTL1-202ENST00000561707 ZNF317Q96PQ6 595 aaPredicted RBP12.49□□□□□ -0.41
COTL1-202ENST00000561707 HIST1H2AJQ99878 128 aa12.49□□□□□ -0.41
COTL1-202ENST00000561707 TMEM79Q9BSE2 394 aa12.49□□□□□ -0.41
COTL1-202ENST00000561707 H2AFJQ9BTM1 129 aa12.49□□□□□ -0.41
COTL1-202ENST00000561707 SHCBP1LQ9BZQ2 653 aa12.49□□□□□ -0.41
COTL1-202ENST00000561707 ATG10Q9H0Y0 220 aa12.49□□□□□ -0.41
COTL1-202ENST00000561707 WASH6PQ9NQA3 447 aa12.49□□□□□ -0.41
COTL1-202ENST00000561707 IMP3Q9NV31 184 aaKnown RBP12.49□□□□□ -0.41
COTL1-202ENST00000561707 UCKL1Q9NWZ5 548 aa12.49□□□□□ -0.41
COTL1-202ENST00000561707 TMCO1Q9UM00 188 aa12.49□□□□□ -0.41
COTL1-202ENST00000561707 TTC28Q96AY4 2481 aa12.49□□□□□ -0.41
COTL1-202ENST00000561707 GMNCA6NCL1 334 aa12.48□□□□□ -0.41
COTL1-202ENST00000561707 A6NCN8 305 aa12.48□□□□□ -0.41
COTL1-202ENST00000561707 STX16-NPEPL1H3BU86 382 aa12.48□□□□□ -0.41
COTL1-202ENST00000561707 PPP6CO00743 305 aa12.48□□□□□ -0.41
COTL1-202ENST00000561707 STX16O14662 325 aa12.48□□□□□ -0.41
COTL1-202ENST00000561707 YY2O15391 372 aa12.48□□□□□ -0.41
COTL1-202ENST00000561707 SDC3O75056 442 aa12.48□□□□□ -0.41
COTL1-202ENST00000561707 SUPT7LO94864 414 aa12.48□□□□□ -0.41
COTL1-202ENST00000561707 CHRNGP07510 517 aa12.48□□□□□ -0.41
COTL1-202ENST00000561707 MTHFD1P11586 935 aaKnown RBP12.48□□□□□ -0.41
COTL1-202ENST00000561707 ABCE1P61221 599 aaKnown RBP12.48□□□□□ -0.41
COTL1-202ENST00000561707 HERVK_113P63132 956 aa12.48□□□□□ -0.41
COTL1-202ENST00000561707 CDKL1Q00532 357 aa12.48□□□□□ -0.41
COTL1-202ENST00000561707 NFKB2Q00653 900 aa12.48□□□□□ -0.41
COTL1-202ENST00000561707 CCDC6Q16204 474 aa12.48□□□□□ -0.41
COTL1-202ENST00000561707 DUOXA1Q1HG43 343 aa12.48□□□□□ -0.41
COTL1-202ENST00000561707 CFAP157Q5JU67 520 aa12.48□□□□□ -0.41
COTL1-202ENST00000561707 ATG16L1Q676U5 607 aa12.48□□□□□ -0.41
COTL1-202ENST00000561707 ANKS6Q68DC2 871 aa12.48□□□□□ -0.41
COTL1-202ENST00000561707 IYDQ6PHW0 289 aa12.48□□□□□ -0.41
COTL1-202ENST00000561707 RGS9BPQ6ZS82 235 aa12.48□□□□□ -0.41
COTL1-202ENST00000561707 FBXO15Q8NCQ5 510 aaPredicted RBP12.48□□□□□ -0.41
COTL1-202ENST00000561707 PPFIBP2Q8ND30 876 aa12.48□□□□□ -0.41
COTL1-202ENST00000561707 FAM46DQ8NEK8 389 aa12.48□□□□□ -0.41
COTL1-202ENST00000561707 JPH3Q8WXH2 748 aaPredicted RBP12.48□□□□□ -0.41
COTL1-202ENST00000561707 FBXL8Q96CD0 374 aa12.48□□□□□ -0.41
COTL1-202ENST00000561707 L3HYPDHQ96EM0 354 aa12.48□□□□□ -0.41
COTL1-202ENST00000561707 CCDC138Q96M89 665 aa12.48□□□□□ -0.41
COTL1-202ENST00000561707 HGH1Q9BTY7 390 aa12.48□□□□□ -0.41
COTL1-202ENST00000561707 ERVK-6Q9BXR3 956 aa12.48□□□□□ -0.41
COTL1-202ENST00000561707 PITPNM3Q9BZ71 974 aa12.48□□□□□ -0.41
COTL1-202ENST00000561707 TRIT1Q9H3H1 467 aaKnown RBP12.48□□□□□ -0.41
COTL1-202ENST00000561707 GSTO2Q9H4Y5 243 aa12.48□□□□□ -0.41
COTL1-202ENST00000561707 WWOXQ9NZC7 414 aa12.48□□□□□ -0.41
COTL1-202ENST00000561707 STOX2Q9P2F5 926 aaPredicted RBP12.48□□□□□ -0.41
COTL1-202ENST00000561707 SPASTQ9UBP0 616 aa12.48□□□□□ -0.41
COTL1-202ENST00000561707 PCOLCE2Q9UKZ9 415 aa12.48□□□□□ -0.41
COTL1-202ENST00000561707 RALGAPA1Q6GYQ0 2036 aa12.48□□□□□ -0.41
COTL1-202ENST00000561707 MYO1CO00159 1063 aa12.47□□□□□ -0.41
COTL1-202ENST00000561707 KLF11O14901 512 aa12.47□□□□□ -0.41
COTL1-202ENST00000561707 NPHS1O60500 1241 aa12.47□□□□□ -0.41
COTL1-202ENST00000561707 CCNT2O60583 730 aaKnown RBP12.47□□□□□ -0.41
COTL1-202ENST00000561707 SHOX2O60902 331 aaPredicted RBP12.47□□□□□ -0.41
COTL1-202ENST00000561707 SNNO75324 88 aaPredicted RBP12.47□□□□□ -0.41
COTL1-202ENST00000561707 PIAS2O75928 621 aa12.47□□□□□ -0.41
COTL1-202ENST00000561707 CFIP05156 583 aa12.47□□□□□ -0.41
COTL1-202ENST00000561707 RPS17P08708 135 aaKnown RBP12.47□□□□□ -0.41
COTL1-202ENST00000561707 F3P13726 295 aa12.47□□□□□ -0.41
COTL1-202ENST00000561707 DRD4P21917 467 aa12.47□□□□□ -0.41
COTL1-202ENST00000561707 GRK2P25098 689 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms