RNA–Protein interactions for RNA: ENST00000560402.1

SMAD3-214, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 590 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-214ENST00000560402 PRKAA1Q13131 559 aa13.21□□□□□ -0.29
SMAD3-214ENST00000560402 UBAP2LQ14157 1087 aaKnown RBP13.21□□□□□ -0.29
SMAD3-214ENST00000560402 PRPSAP1Q14558 356 aa13.21□□□□□ -0.29
SMAD3-214ENST00000560402 UGT8Q16880 541 aa13.21□□□□□ -0.29
SMAD3-214ENST00000560402 KRT71Q3SY84 523 aa13.21□□□□□ -0.29
SMAD3-214ENST00000560402 AGBL2Q5U5Z8 902 aa13.21□□□□□ -0.29
SMAD3-214ENST00000560402 ATCAYQ86WG3 371 aa13.21□□□□□ -0.29
SMAD3-214ENST00000560402 PPIL6Q8IXY8 311 aa13.21□□□□□ -0.29
SMAD3-214ENST00000560402 TEX19Q8NA77 164 aa13.21□□□□□ -0.29
SMAD3-214ENST00000560402 DCUN1D1Q96GG9 259 aa13.21□□□□□ -0.29
SMAD3-214ENST00000560402 LRFN5Q96NI6 719 aa13.21□□□□□ -0.29
SMAD3-214ENST00000560402 FAM118BQ9BPY3 351 aa13.21□□□□□ -0.29
SMAD3-214ENST00000560402 CCM2Q9BSQ5 444 aa13.21□□□□□ -0.29
SMAD3-214ENST00000560402 TXLNGYQ9BZA5 131 aa13.21□□□□□ -0.29
SMAD3-214ENST00000560402 WWP1Q9H0M0 922 aa13.21□□□□□ -0.29
SMAD3-214ENST00000560402 ASB8Q9H765 288 aa13.21□□□□□ -0.29
SMAD3-214ENST00000560402 SYTL2Q9HCH5 934 aa13.21□□□□□ -0.29
SMAD3-214ENST00000560402 HRASLS2Q9NWW9 162 aa13.21□□□□□ -0.29
SMAD3-214ENST00000560402 PAK5Q9P286 719 aa13.21□□□□□ -0.29
SMAD3-214ENST00000560402 SLC24A2Q9UI40 661 aa13.21□□□□□ -0.29
SMAD3-214ENST00000560402 NEU2Q9Y3R4 380 aa13.21□□□□□ -0.29
SMAD3-214ENST00000560402 ARL5AQ9Y689 179 aa13.21□□□□□ -0.29
SMAD3-214ENST00000560402 PIKFYVEQ9Y2I7 2098 aa13.2□□□□□ -0.3
SMAD3-214ENST00000560402 CLEC18AA5D8T8 446 aa13.2□□□□□ -0.3
SMAD3-214ENST00000560402 AGAP14A8MT82 685 aa13.2□□□□□ -0.3
SMAD3-214ENST00000560402 SCRG1O75711 98 aa13.2□□□□□ -0.3
SMAD3-214ENST00000560402 MSL3P1P0C860 447 aa13.2□□□□□ -0.3
SMAD3-214ENST00000560402 ITGALP20701 1170 aa13.2□□□□□ -0.3
SMAD3-214ENST00000560402 RBL1P28749 1068 aa13.2□□□□□ -0.3
SMAD3-214ENST00000560402 ADRA1AP35348 466 aa13.2□□□□□ -0.3
SMAD3-214ENST00000560402 HADHAP40939 763 aa13.2□□□□□ -0.3
SMAD3-214ENST00000560402 SRSF1Q07955 248 aaKnown RBP eCLIP13.2□□□□□ -0.3
SMAD3-214ENST00000560402 SEMA5AQ13591 1074 aa13.2□□□□□ -0.3
SMAD3-214ENST00000560402 KCNAB1Q14722 419 aa13.2□□□□□ -0.3
SMAD3-214ENST00000560402 HIBCHQ6NVY1 386 aaPredicted RBP13.2□□□□□ -0.3
SMAD3-214ENST00000560402 CLEC18BQ6UXF7 455 aa13.2□□□□□ -0.3
SMAD3-214ENST00000560402 RANBP10Q6VN20 620 aa13.2□□□□□ -0.3
SMAD3-214ENST00000560402 ASB18Q6ZVZ8 466 aa13.2□□□□□ -0.3
SMAD3-214ENST00000560402 CENPUQ71F23 418 aa13.2□□□□□ -0.3
SMAD3-214ENST00000560402 DET1Q7L5Y6 550 aa13.2□□□□□ -0.3
SMAD3-214ENST00000560402 TMEM126BQ8IUX1 230 aa13.2□□□□□ -0.3
SMAD3-214ENST00000560402 CLEC18CQ8NCF0 446 aa13.2□□□□□ -0.3
SMAD3-214ENST00000560402 OR4K2Q8NGD2 314 aa13.2□□□□□ -0.3
SMAD3-214ENST00000560402 MIB2Q96AX9 1013 aa13.2□□□□□ -0.3
SMAD3-214ENST00000560402 ATP6V1G3Q96LB4 118 aa13.2□□□□□ -0.3
SMAD3-214ENST00000560402 RMDN2Q96LZ7 410 aa13.2□□□□□ -0.3
SMAD3-214ENST00000560402 INSM2Q96T92 566 aaPredicted RBP13.2□□□□□ -0.3
SMAD3-214ENST00000560402 GORASP1Q9BQQ3 440 aa13.2□□□□□ -0.3
SMAD3-214ENST00000560402 TMEM121Q9BTD3 319 aa13.2□□□□□ -0.3
SMAD3-214ENST00000560402 ROPN1BQ9BZX4 212 aaPredicted RBP13.2□□□□□ -0.3
SMAD3-214ENST00000560402 CENPHQ9H3R5 247 aa13.2□□□□□ -0.3
SMAD3-214ENST00000560402 VPS37BQ9H9H4 285 aa13.2□□□□□ -0.3
SMAD3-214ENST00000560402 ROPN1Q9HAT0 212 aaPredicted RBP13.2□□□□□ -0.3
SMAD3-214ENST00000560402 C1GALT1Q9NS00 363 aa13.2□□□□□ -0.3
SMAD3-214ENST00000560402 SOHLH2Q9NX45 425 aa13.2□□□□□ -0.3
SMAD3-214ENST00000560402 FKBPLQ9UIM3 349 aa13.2□□□□□ -0.3
SMAD3-214ENST00000560402 CRLS1Q9UJA2 301 aa13.2□□□□□ -0.3
SMAD3-214ENST00000560402 POMT2Q9UKY4 750 aa13.2□□□□□ -0.3
SMAD3-214ENST00000560402 PCDHGA9Q9Y5G4 932 aaKnown RBP13.2□□□□□ -0.3
SMAD3-214ENST00000560402 CFAP20Q9Y6A4 193 aaKnown RBP13.2□□□□□ -0.3
SMAD3-214ENST00000560402 RELNP78509 3460 aa13.19□□□□□ -0.3
SMAD3-214ENST00000560402 C17orf113A0A1B0GUU1 675 aa13.19□□□□□ -0.3
SMAD3-214ENST00000560402 OR6C74A6NCV1 312 aa13.19□□□□□ -0.3
SMAD3-214ENST00000560402 EIF3HO15372 352 aaKnown RBP eCLIP13.19□□□□□ -0.3
SMAD3-214ENST00000560402 AGTP01019 485 aa13.19□□□□□ -0.3
SMAD3-214ENST00000560402 GSTM1P09488 218 aa13.19□□□□□ -0.3
SMAD3-214ENST00000560402 IVDP26440 423 aa13.19□□□□□ -0.3
SMAD3-214ENST00000560402 CA5AP35218 305 aa13.19□□□□□ -0.3
SMAD3-214ENST00000560402 ARL4CP56559 192 aa13.19□□□□□ -0.3
SMAD3-214ENST00000560402 XIAPP98170 497 aa13.19□□□□□ -0.3
SMAD3-214ENST00000560402 GSTM4Q03013 218 aa13.19□□□□□ -0.3
SMAD3-214ENST00000560402 UAP1Q16222 522 aaPredicted RBP13.19□□□□□ -0.3
SMAD3-214ENST00000560402 CAPRIN2Q6IMN6 1127 aaKnown RBP13.19□□□□□ -0.3
SMAD3-214ENST00000560402 DUS1LQ6P1R4 473 aaKnown RBP13.19□□□□□ -0.3
SMAD3-214ENST00000560402 ZNF517Q6ZMY9 492 aaPredicted RBP13.19□□□□□ -0.3
SMAD3-214ENST00000560402 RELL1Q8IUW5 271 aa13.19□□□□□ -0.3
SMAD3-214ENST00000560402 NXPE1Q8N323 547 aa13.19□□□□□ -0.3
SMAD3-214ENST00000560402 ACVR1CQ8NER5 493 aa13.19□□□□□ -0.3
SMAD3-214ENST00000560402 CPT1BQ92523 772 aa13.19□□□□□ -0.3
SMAD3-214ENST00000560402 ZNF501Q96CX3 271 aaPredicted RBP13.19□□□□□ -0.3
SMAD3-214ENST00000560402 RNF31Q96EP0 1072 aa13.19□□□□□ -0.3
SMAD3-214ENST00000560402 SPATA13Q96N96 652 aa13.19□□□□□ -0.3
SMAD3-214ENST00000560402 COPS8Q99627 209 aa13.19□□□□□ -0.3
SMAD3-214ENST00000560402 PPCSQ9HAB8 311 aa13.19□□□□□ -0.3
SMAD3-214ENST00000560402 TMBIM4Q9HC24 238 aa13.19□□□□□ -0.3
SMAD3-214ENST00000560402 PSD3Q9NYI0 1048 aa13.19□□□□□ -0.3
SMAD3-214ENST00000560402 TLK1Q9UKI8 766 aa13.19□□□□□ -0.3
SMAD3-214ENST00000560402 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP13.18□□□□□ -0.3
SMAD3-214ENST00000560402 CYSRT1A8MQ03 144 aa13.18□□□□□ -0.3
SMAD3-214ENST00000560402 IFRD1O00458 451 aaPredicted RBP13.18□□□□□ -0.3
SMAD3-214ENST00000560402 RIPK2O43353 540 aa13.18□□□□□ -0.3
SMAD3-214ENST00000560402 NTRK1P04629 796 aa13.18□□□□□ -0.3
SMAD3-214ENST00000560402 KLK3P07288 261 aaPredicted RBP13.18□□□□□ -0.3
SMAD3-214ENST00000560402 RAB40ALP0C0E4 278 aa13.18□□□□□ -0.3
SMAD3-214ENST00000560402 NR1D1P20393 614 aa13.18□□□□□ -0.3
SMAD3-214ENST00000560402 CDH3P22223 829 aa13.18□□□□□ -0.3
SMAD3-214ENST00000560402 PSMB4P28070 264 aa13.18□□□□□ -0.3
SMAD3-214ENST00000560402 PHBP35232 272 aa13.18□□□□□ -0.3
SMAD3-214ENST00000560402 KPNA2P52292 529 aaKnown RBP13.18□□□□□ -0.3
SMAD3-214ENST00000560402 ZNF140P52738 457 aaPredicted RBP13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms