RNA–Protein interactions for RNA: ENST00000559844.5

SNX1-208, Transcript of sorting nexin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX1, Length 1,971 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-208ENST00000559844 DNAJC9Q8WXX5 260 aa17.4■□□□□ 0.38
SNX1-208ENST00000559844 RHBDF1Q96CC6 855 aa17.4■□□□□ 0.38
SNX1-208ENST00000559844 PPP1R16AQ96I34 528 aa17.4■□□□□ 0.38
SNX1-208ENST00000559844 IPPKQ9H8X2 491 aa17.4■□□□□ 0.38
SNX1-208ENST00000559844 NMRK1Q9NWW6 199 aa17.4■□□□□ 0.38
SNX1-208ENST00000559844 OPTCQ9UBM4 332 aa17.4■□□□□ 0.38
SNX1-208ENST00000559844 PCDHGA7Q9Y5G6 932 aa17.4■□□□□ 0.38
SNX1-208ENST00000559844 KMT2EQ8IZD2 1858 aa17.39■□□□□ 0.37
SNX1-208ENST00000559844 OR7A17O14581 309 aa17.39■□□□□ 0.37
SNX1-208ENST00000559844 MAP3K7O43318 606 aa17.39■□□□□ 0.37
SNX1-208ENST00000559844 NUAK1O60285 661 aa17.39■□□□□ 0.37
SNX1-208ENST00000559844 BAG2O95816 211 aa17.39■□□□□ 0.37
SNX1-208ENST00000559844 ANXA5P08758 320 aa17.39■□□□□ 0.37
SNX1-208ENST00000559844 ITGB7P26010 798 aa17.39■□□□□ 0.37
SNX1-208ENST00000559844 HSPA7P48741 367 aa17.39■□□□□ 0.37
SNX1-208ENST00000559844 CDKL1Q00532 357 aa17.39■□□□□ 0.37
SNX1-208ENST00000559844 CEACAM7Q14002 265 aa17.39■□□□□ 0.37
SNX1-208ENST00000559844 NUMA1Q14980 2115 aa17.39■□□□□ 0.37
SNX1-208ENST00000559844 PHKG1Q16816 387 aa17.39■□□□□ 0.37
SNX1-208ENST00000559844 TLDC1Q6P9B6 456 aa17.39■□□□□ 0.37
SNX1-208ENST00000559844 FUNDC1Q8IVP5 155 aa17.39■□□□□ 0.37
SNX1-208ENST00000559844 TCAIMQ8N3R3 496 aa17.39■□□□□ 0.37
SNX1-208ENST00000559844 OR4F6Q8NGB9 312 aa17.39■□□□□ 0.37
SNX1-208ENST00000559844 METTL6Q8TCB7 284 aa17.39■□□□□ 0.37
SNX1-208ENST00000559844 NRG4Q8WWG1 115 aa17.39■□□□□ 0.37
SNX1-208ENST00000559844 ARRDC3Q96B67 414 aa17.39■□□□□ 0.37
SNX1-208ENST00000559844 TRIM54Q9BYV2 358 aa17.39■□□□□ 0.37
SNX1-208ENST00000559844 DYRK4Q9NR20 520 aa17.39■□□□□ 0.37
SNX1-208ENST00000559844 AIG1Q9NVV5 245 aa17.39■□□□□ 0.37
SNX1-208ENST00000559844 CROTQ9UKG9 612 aa17.39■□□□□ 0.37
SNX1-208ENST00000559844 TMPRSS11EQ9UL52 423 aa17.39■□□□□ 0.37
SNX1-208ENST00000559844 ST14Q9Y5Y6 855 aa17.39■□□□□ 0.37
SNX1-208ENST00000559844 PABPN1LA6NDY0 278 aaKnown RBP17.39■□□□□ 0.37
SNX1-208ENST00000559844 K7EPI3 171 aa17.39■□□□□ 0.37
SNX1-208ENST00000559844 PLK4O00444 970 aa17.39■□□□□ 0.37
SNX1-208ENST00000559844 SLC16A5O15375 505 aa17.39■□□□□ 0.37
SNX1-208ENST00000559844 APBB3O95704 486 aa17.39■□□□□ 0.37
SNX1-208ENST00000559844 MSH3P20585 1137 aa17.39■□□□□ 0.37
SNX1-208ENST00000559844 C5AR1P21730 350 aa17.39■□□□□ 0.37
SNX1-208ENST00000559844 HMOX2P30519 316 aa17.39■□□□□ 0.37
SNX1-208ENST00000559844 DPP6P42658 865 aa17.39■□□□□ 0.37
SNX1-208ENST00000559844 ERVK-8P63133 956 aa17.39■□□□□ 0.37
SNX1-208ENST00000559844 RALGDSQ12967 914 aa17.39■□□□□ 0.37
SNX1-208ENST00000559844 SP140Q13342 867 aa17.39■□□□□ 0.37
SNX1-208ENST00000559844 FLOT2Q14254 428 aa17.39■□□□□ 0.37
SNX1-208ENST00000559844 C18orf21Q32NC0 220 aaPredicted RBP17.39■□□□□ 0.37
SNX1-208ENST00000559844 COQ5Q5HYK3 327 aa17.39■□□□□ 0.37
SNX1-208ENST00000559844 HENMT1Q5T8I9 393 aaKnown RBP17.39■□□□□ 0.37
SNX1-208ENST00000559844 LETMD1Q6P1Q0 360 aa17.39■□□□□ 0.37
SNX1-208ENST00000559844 MAMSTRQ6ZN01 415 aa17.39■□□□□ 0.37
SNX1-208ENST00000559844 PARS2Q7L3T8 475 aaKnown RBP17.39■□□□□ 0.37
SNX1-208ENST00000559844 MILR1Q7Z6M3 343 aa17.39■□□□□ 0.37
SNX1-208ENST00000559844 KBTBD6Q86V97 674 aa17.39■□□□□ 0.37
SNX1-208ENST00000559844 NRSN1Q8IZ57 195 aa17.39■□□□□ 0.37
SNX1-208ENST00000559844 DDHD1Q8NEL9 900 aa17.39■□□□□ 0.37
SNX1-208ENST00000559844 OR9I1Q8NGQ6 314 aa17.39■□□□□ 0.37
SNX1-208ENST00000559844 TMEM79Q9BSE2 394 aa17.39■□□□□ 0.37
SNX1-208ENST00000559844 SPAG4Q9NPE6 437 aa17.39■□□□□ 0.37
SNX1-208ENST00000559844 C11orf16Q9NQ32 467 aa17.39■□□□□ 0.37
SNX1-208ENST00000559844 GIMAP2Q9UG22 337 aa17.39■□□□□ 0.37
SNX1-208ENST00000559844 GPR45Q9Y5Y3 372 aa17.39■□□□□ 0.37
SNX1-208ENST00000559844 EML5Q05BV3 1969 aa17.38■□□□□ 0.37
SNX1-208ENST00000559844 PSMD11O00231 422 aa17.38■□□□□ 0.37
SNX1-208ENST00000559844 FTH1P02794 183 aa17.38■□□□□ 0.37
SNX1-208ENST00000559844 CAPN1P07384 714 aa17.38■□□□□ 0.37
SNX1-208ENST00000559844 ACADMP11310 421 aa17.38■□□□□ 0.37
SNX1-208ENST00000559844 PXNP49023 591 aaPredicted RBP17.38■□□□□ 0.37
SNX1-208ENST00000559844 TRAF3Q13114 568 aa17.38■□□□□ 0.37
SNX1-208ENST00000559844 ATP6AP1LQ52LC2 224 aa17.38■□□□□ 0.37
SNX1-208ENST00000559844 PDCD4Q53EL6 469 aaKnown RBP17.38■□□□□ 0.37
SNX1-208ENST00000559844 RNF165Q6ZSG1 346 aa17.38■□□□□ 0.37
SNX1-208ENST00000559844 Q6ZVL8 140 aa17.38■□□□□ 0.37
SNX1-208ENST00000559844 NEK10Q6ZWH5 1172 aa17.38■□□□□ 0.37
SNX1-208ENST00000559844 AADATQ8N5Z0 425 aa17.38■□□□□ 0.37
SNX1-208ENST00000559844 GANCQ8TET4 914 aa17.38■□□□□ 0.37
SNX1-208ENST00000559844 PYDC1Q8WXC3 89 aa17.38■□□□□ 0.37
SNX1-208ENST00000559844 DLG3Q92796 817 aa17.38■□□□□ 0.37
SNX1-208ENST00000559844 NAF1Q96HR8 494 aaKnown RBP17.38■□□□□ 0.37
SNX1-208ENST00000559844 VPS35Q96QK1 796 aa17.38■□□□□ 0.37
SNX1-208ENST00000559844 ABCG8Q9H221 673 aa17.38■□□□□ 0.37
SNX1-208ENST00000559844 ADA2Q9NZK5 511 aa17.38■□□□□ 0.37
SNX1-208ENST00000559844 A0A1W2PP55 124 aa17.37■□□□□ 0.37
SNX1-208ENST00000559844 NR5A2O00482 541 aa17.37■□□□□ 0.37
SNX1-208ENST00000559844 ANGPT2O15123 496 aa17.37■□□□□ 0.37
SNX1-208ENST00000559844 RPSAP08865 295 aaKnown RBP17.37■□□□□ 0.37
SNX1-208ENST00000559844 ACADSP16219 412 aa17.37■□□□□ 0.37
SNX1-208ENST00000559844 MMP12P39900 470 aa17.37■□□□□ 0.37
SNX1-208ENST00000559844 ETV3P41162 512 aa17.37■□□□□ 0.37
SNX1-208ENST00000559844 ERFP50548 548 aa17.37■□□□□ 0.37
SNX1-208ENST00000559844 LDLRAP1Q5SW96 308 aa17.37■□□□□ 0.37
SNX1-208ENST00000559844 C8orf82Q6P1X6 216 aaPredicted RBP17.37■□□□□ 0.37
SNX1-208ENST00000559844 PRMT9Q6P2P2 845 aa17.37■□□□□ 0.37
SNX1-208ENST00000559844 UBE2R2Q712K3 238 aaPredicted RBP17.37■□□□□ 0.37
SNX1-208ENST00000559844 DET1Q7L5Y6 550 aa17.37■□□□□ 0.37
SNX1-208ENST00000559844 TECPR1Q7Z6L1 1165 aa17.37■□□□□ 0.37
SNX1-208ENST00000559844 DHDDSQ86SQ9 333 aa17.37■□□□□ 0.37
SNX1-208ENST00000559844 CAMKK1Q8N5S9 505 aa17.37■□□□□ 0.37
SNX1-208ENST00000559844 SCAMP4Q969E2 229 aa17.37■□□□□ 0.37
SNX1-208ENST00000559844 ZNF570Q96NI8 536 aa17.37■□□□□ 0.37
SNX1-208ENST00000559844 CDK15Q96Q40 435 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms