RNA–Protein interactions for RNA: ENST00000558988.5

SPG11-213, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 3

Gene SPG11, Length 620 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-213ENST00000558988 DDX56Q9NY93 547 aaKnown RBP7.21□□□□□ -1.26
SPG11-213ENST00000558988 SPO11Q9Y5K1 396 aa7.21□□□□□ -1.26
SPG11-213ENST00000558988 ASPMQ8IZT6 3477 aa7.2□□□□□ -1.26
SPG11-213ENST00000558988 H7C0C1 242 aa7.2□□□□□ -1.26
SPG11-213ENST00000558988 CDK14O94921 469 aa7.2□□□□□ -1.26
SPG11-213ENST00000558988 NDST3O95803 873 aa7.2□□□□□ -1.26
SPG11-213ENST00000558988 VIPP01282 170 aa7.2□□□□□ -1.26
SPG11-213ENST00000558988 SLC2A4P14672 509 aa7.2□□□□□ -1.26
SPG11-213ENST00000558988 LIFP15018 202 aa7.2□□□□□ -1.26
SPG11-213ENST00000558988 BPIP17213 487 aa7.2□□□□□ -1.26
SPG11-213ENST00000558988 AMD1P17707 334 aa7.2□□□□□ -1.26
SPG11-213ENST00000558988 UGT1A3P35503 534 aa7.2□□□□□ -1.26
SPG11-213ENST00000558988 MAGEA1P43355 309 aa7.2□□□□□ -1.26
SPG11-213ENST00000558988 FASLGP48023 281 aa7.2□□□□□ -1.26
SPG11-213ENST00000558988 ATP5OP48047 213 aa7.2□□□□□ -1.26
SPG11-213ENST00000558988 NAP1L1P55209 391 aaKnown RBP7.2□□□□□ -1.26
SPG11-213ENST00000558988 GFERP55789 205 aa7.2□□□□□ -1.26
SPG11-213ENST00000558988 WNT3AP56704 352 aa7.2□□□□□ -1.26
SPG11-213ENST00000558988 TRA2AQ13595 282 aaKnown RBP eCLIP7.2□□□□□ -1.26
SPG11-213ENST00000558988 GTF2H3Q13889 308 aa7.2□□□□□ -1.26
SPG11-213ENST00000558988 TFDP2Q14188 446 aa7.2□□□□□ -1.26
SPG11-213ENST00000558988 NR1D2Q14995 579 aa7.2□□□□□ -1.26
SPG11-213ENST00000558988 PPP2R5EQ16537 467 aa7.2□□□□□ -1.26
SPG11-213ENST00000558988 LINC00303Q3SY05 128 aa7.2□□□□□ -1.26
SPG11-213ENST00000558988 KHDC1Q4VXA5 237 aaKnown RBP7.2□□□□□ -1.26
SPG11-213ENST00000558988 PRR31Q5SQ13 230 aa7.2□□□□□ -1.26
SPG11-213ENST00000558988 DCAF12Q5T6F0 453 aa7.2□□□□□ -1.26
SPG11-213ENST00000558988 TMEM71Q6P5X7 295 aa7.2□□□□□ -1.26
SPG11-213ENST00000558988 CYP2R1Q6VVX0 501 aa7.2□□□□□ -1.26
SPG11-213ENST00000558988 PID1Q7Z2X4 250 aa7.2□□□□□ -1.26
SPG11-213ENST00000558988 GLT6D1Q7Z4J2 308 aa7.2□□□□□ -1.26
SPG11-213ENST00000558988 ADGRG6Q86SQ4 1221 aa7.2□□□□□ -1.26
SPG11-213ENST00000558988 STK32CQ86UX6 486 aa7.2□□□□□ -1.26
SPG11-213ENST00000558988 LRRTM4Q86VH4 590 aa7.2□□□□□ -1.26
SPG11-213ENST00000558988 CACNA2D3Q8IZS8 1091 aa7.2□□□□□ -1.26
SPG11-213ENST00000558988 EXD3Q8N9H8 876 aa7.2□□□□□ -1.26
SPG11-213ENST00000558988 GOLM1Q8NBJ4 401 aa7.2□□□□□ -1.26
SPG11-213ENST00000558988 NAT14Q8WUY8 206 aa7.2□□□□□ -1.26
SPG11-213ENST00000558988 HTR3CQ8WXA8 447 aa7.2□□□□□ -1.26
SPG11-213ENST00000558988 P3H4Q92791 437 aa7.2□□□□□ -1.26
SPG11-213ENST00000558988 FATE1Q969F0 183 aa7.2□□□□□ -1.26
SPG11-213ENST00000558988 GLYATL1Q969I3 302 aa7.2□□□□□ -1.26
SPG11-213ENST00000558988 SH3KBP1Q96B97 665 aa7.2□□□□□ -1.26
SPG11-213ENST00000558988 CXorf40BQ96DE9 158 aa7.2□□□□□ -1.26
SPG11-213ENST00000558988 TTC25Q96NG3 672 aa7.2□□□□□ -1.26
SPG11-213ENST00000558988 OLFM3Q96PB7 478 aa7.2□□□□□ -1.26
SPG11-213ENST00000558988 TGM7Q96PF1 710 aa7.2□□□□□ -1.26
SPG11-213ENST00000558988 PLEKHG4BQ96PX9 1271 aa7.2□□□□□ -1.26
SPG11-213ENST00000558988 TRIB3Q96RU7 358 aa7.2□□□□□ -1.26
SPG11-213ENST00000558988 LYSMD1Q96S90 227 aa7.2□□□□□ -1.26
SPG11-213ENST00000558988 FAM118BQ9BPY3 351 aa7.2□□□□□ -1.26
SPG11-213ENST00000558988 APOL2Q9BQE5 337 aa7.2□□□□□ -1.26
SPG11-213ENST00000558988 HERPUD2Q9BSE4 406 aa7.2□□□□□ -1.26
SPG11-213ENST00000558988 ZSCAN5AQ9BUG6 496 aa7.2□□□□□ -1.26
SPG11-213ENST00000558988 FSD1LQ9BXM9 530 aa7.2□□□□□ -1.26
SPG11-213ENST00000558988 SLC25A51Q9H1U9 297 aa7.2□□□□□ -1.26
SPG11-213ENST00000558988 CARD9Q9H257 536 aa7.2□□□□□ -1.26
SPG11-213ENST00000558988 RMI1Q9H9A7 625 aa7.2□□□□□ -1.26
SPG11-213ENST00000558988 APMAPQ9HDC9 416 aa7.2□□□□□ -1.26
SPG11-213ENST00000558988 SARS2Q9NP81 518 aaKnown RBP7.2□□□□□ -1.26
SPG11-213ENST00000558988 CPNE7Q9UBL6 633 aa7.2□□□□□ -1.26
SPG11-213ENST00000558988 SLC23A2Q9UGH3 650 aa7.2□□□□□ -1.26
SPG11-213ENST00000558988 RSPH14Q9UHP6 348 aa7.2□□□□□ -1.26
SPG11-213ENST00000558988 KIR2DS5A0A0G2JLQ3 304 aa7.19□□□□□ -1.26
SPG11-213ENST00000558988 A0A0G2JNG1 304 aa7.19□□□□□ -1.26
SPG11-213ENST00000558988 RGSL1A5PLK6 1076 aa7.19□□□□□ -1.26
SPG11-213ENST00000558988 OR2AG2A6NM03 316 aa7.19□□□□□ -1.26
SPG11-213ENST00000558988 OR52A4PA6NMU1 304 aa7.19□□□□□ -1.26
SPG11-213ENST00000558988 KIR2DS3K7RE56 304 aa7.19□□□□□ -1.26
SPG11-213ENST00000558988 KMOO15229 486 aa7.19□□□□□ -1.26
SPG11-213ENST00000558988 UGT1A9O60656 530 aa7.19□□□□□ -1.26
SPG11-213ENST00000558988 RAD1O60671 282 aa7.19□□□□□ -1.26
SPG11-213ENST00000558988 CLEC3AO75596 197 aa7.19□□□□□ -1.26
SPG11-213ENST00000558988 GSNP06396 782 aa7.19□□□□□ -1.26
SPG11-213ENST00000558988 ZNF7P17097 686 aaPredicted RBP7.19□□□□□ -1.26
SPG11-213ENST00000558988 UGT1A6P19224 532 aa7.19□□□□□ -1.26
SPG11-213ENST00000558988 UGT1A1P22309 533 aa7.19□□□□□ -1.26
SPG11-213ENST00000558988 UGT1A4P22310 534 aa7.19□□□□□ -1.26
SPG11-213ENST00000558988 CTNNA2P26232 953 aa7.19□□□□□ -1.26
SPG11-213ENST00000558988 CD82P27701 267 aa7.19□□□□□ -1.26
SPG11-213ENST00000558988 AKT1P31749 480 aa7.19□□□□□ -1.26
SPG11-213ENST00000558988 CDKN2BP42772 138 aa7.19□□□□□ -1.26
SPG11-213ENST00000558988 SLC1A1P43005 524 aa7.19□□□□□ -1.26
SPG11-213ENST00000558988 LEPRP48357 1165 aaKnown RBP7.19□□□□□ -1.26
SPG11-213ENST00000558988 ADCY2Q08462 1091 aa7.19□□□□□ -1.26
SPG11-213ENST00000558988 PTPRCAPQ14761 206 aa7.19□□□□□ -1.26
SPG11-213ENST00000558988 KIR2DS5Q14953 304 aa7.19□□□□□ -1.26
SPG11-213ENST00000558988 PRKD1Q15139 912 aaPredicted RBP7.19□□□□□ -1.26
SPG11-213ENST00000558988 SPA17Q15506 151 aa7.19□□□□□ -1.26
SPG11-213ENST00000558988 CHRNA6Q15825 494 aa7.19□□□□□ -1.26
SPG11-213ENST00000558988 TBR1Q16650 682 aa7.19□□□□□ -1.26
SPG11-213ENST00000558988 CLPPQ16740 277 aaPredicted RBP7.19□□□□□ -1.26
SPG11-213ENST00000558988 ATP13A5Q4VNC0 1218 aa7.19□□□□□ -1.26
SPG11-213ENST00000558988 TEX44Q53QW1 395 aa7.19□□□□□ -1.26
SPG11-213ENST00000558988 SIRPB2Q5JXA9 342 aa7.19□□□□□ -1.26
SPG11-213ENST00000558988 CHCHD2P9Q5T1J5 151 aaPredicted RBP7.19□□□□□ -1.26
SPG11-213ENST00000558988 LRRC38Q5VT99 294 aa7.19□□□□□ -1.26
SPG11-213ENST00000558988 IRGCQ6NXR0 463 aa7.19□□□□□ -1.26
SPG11-213ENST00000558988 FAM92BQ6ZTR7 304 aa7.19□□□□□ -1.26
SPG11-213ENST00000558988 DET1Q7L5Y6 550 aa7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms