RNA–Protein interactions for RNA: ENST00000558847.1

CASC4-206, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 622 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-206ENST00000558847 LIPFP07098 398 aa4.18□□□□□ -1.74
CASC4-206ENST00000558847 KRT19P08727 400 aa4.18□□□□□ -1.74
CASC4-206ENST00000558847 PLA2G4BP0C869 781 aa4.18□□□□□ -1.74
CASC4-206ENST00000558847 T-ENOLP0DO92 83 aa4.18□□□□□ -1.74
CASC4-206ENST00000558847 CDH1P12830 882 aa4.18□□□□□ -1.74
CASC4-206ENST00000558847 ITGA2P17301 1181 aa4.18□□□□□ -1.74
CASC4-206ENST00000558847 HOXA11P31270 313 aaPredicted RBP4.18□□□□□ -1.74
CASC4-206ENST00000558847 THBS3P49746 956 aa4.18□□□□□ -1.74
CASC4-206ENST00000558847 ART1P52961 327 aa4.18□□□□□ -1.74
CASC4-206ENST00000558847 TPD52P55327 224 aaPredicted RBP4.18□□□□□ -1.74
CASC4-206ENST00000558847 HNRNPKP61978 463 aaKnown RBP eCLIP4.18□□□□□ -1.74
CASC4-206ENST00000558847 PITX1P78337 314 aaPredicted RBP4.18□□□□□ -1.74
CASC4-206ENST00000558847 DLK1P80370 383 aa4.18□□□□□ -1.74
CASC4-206ENST00000558847 MORF4L2Q15014 288 aa4.18□□□□□ -1.74
CASC4-206ENST00000558847 TYSND1Q2T9J0 566 aa4.18□□□□□ -1.74
CASC4-206ENST00000558847 ELFN2Q5R3F8 820 aa4.18□□□□□ -1.74
CASC4-206ENST00000558847 KIAA1161Q6NSJ0 714 aa4.18□□□□□ -1.74
CASC4-206ENST00000558847 FAM171BQ6P995 826 aa4.18□□□□□ -1.74
CASC4-206ENST00000558847 NUP93Q8N1F7 819 aa4.18□□□□□ -1.74
CASC4-206ENST00000558847 MSANTD4Q8NCY6 345 aa4.18□□□□□ -1.74
CASC4-206ENST00000558847 OR5M8Q8NGP6 311 aa4.18□□□□□ -1.74
CASC4-206ENST00000558847 LILRB1Q8NHL6 650 aaPredicted RBP4.18□□□□□ -1.74
CASC4-206ENST00000558847 RNF128Q8TEB7 428 aa4.18□□□□□ -1.74
CASC4-206ENST00000558847 CORO2AQ92828 525 aa4.18□□□□□ -1.74
CASC4-206ENST00000558847 LINGO1Q96FE5 620 aa4.18□□□□□ -1.74
CASC4-206ENST00000558847 OTUB1Q96FW1 271 aaPredicted RBP4.18□□□□□ -1.74
CASC4-206ENST00000558847 MED30Q96HR3 178 aa4.18□□□□□ -1.74
CASC4-206ENST00000558847 LYZL4Q96KX0 146 aa4.18□□□□□ -1.74
CASC4-206ENST00000558847 MEIS3Q99687 375 aa4.18□□□□□ -1.74
CASC4-206ENST00000558847 GTPBP2Q9BX10 602 aaKnown RBP4.18□□□□□ -1.74
CASC4-206ENST00000558847 MIS12Q9H081 205 aa4.18□□□□□ -1.74
CASC4-206ENST00000558847 GAREM1Q9H706 876 aa4.18□□□□□ -1.74
CASC4-206ENST00000558847 ACKR4Q9NPB9 350 aa4.18□□□□□ -1.74
CASC4-206ENST00000558847 TCF7L2Q9NQB0 619 aa4.18□□□□□ -1.74
CASC4-206ENST00000558847 GKN1Q9NS71 199 aa4.18□□□□□ -1.74
CASC4-206ENST00000558847 MALT1Q9UDY8 824 aa4.18□□□□□ -1.74
CASC4-206ENST00000558847 SAA2-SAA4A0A096LPE2 208 aa4.17□□□□□ -1.74
CASC4-206ENST00000558847 A0A1W2PRB8 838 aa4.17□□□□□ -1.74
CASC4-206ENST00000558847 FEZF1A0PJY2 475 aa4.17□□□□□ -1.74
CASC4-206ENST00000558847 ASPDHA6ND91 283 aa4.17□□□□□ -1.74
CASC4-206ENST00000558847 SLC30A4O14863 429 aa4.17□□□□□ -1.74
CASC4-206ENST00000558847 SMAD6O43541 496 aaKnown RBP4.17□□□□□ -1.74
CASC4-206ENST00000558847 WISP2O76076 250 aa4.17□□□□□ -1.74
CASC4-206ENST00000558847 PGLSO95336 258 aa4.17□□□□□ -1.74
CASC4-206ENST00000558847 GCNT3O95395 438 aa4.17□□□□□ -1.74
CASC4-206ENST00000558847 C9P02748 559 aa4.17□□□□□ -1.74
CASC4-206ENST00000558847 ALPLP05186 524 aa4.17□□□□□ -1.74
CASC4-206ENST00000558847 ZFYP08048 801 aaPredicted RBP4.17□□□□□ -1.74
CASC4-206ENST00000558847 NGFRP08138 427 aa4.17□□□□□ -1.74
CASC4-206ENST00000558847 HLA-DOBP13765 273 aa4.17□□□□□ -1.74
CASC4-206ENST00000558847 ATP6V1B1P15313 513 aa4.17□□□□□ -1.74
CASC4-206ENST00000558847 EPCAMP16422 314 aa4.17□□□□□ -1.74
CASC4-206ENST00000558847 CKMT2P17540 419 aa4.17□□□□□ -1.74
CASC4-206ENST00000558847 OAS2P29728 719 aaKnown RBP4.17□□□□□ -1.74
CASC4-206ENST00000558847 NR2C2P49116 596 aa4.17□□□□□ -1.74
CASC4-206ENST00000558847 MAPK12P53778 367 aa4.17□□□□□ -1.74
CASC4-206ENST00000558847 DSCR9P59020 149 aa4.17□□□□□ -1.74
CASC4-206ENST00000558847 BRWD1-AS2P59051 145 aa4.17□□□□□ -1.74
CASC4-206ENST00000558847 TUBB4BP68371 445 aa4.17□□□□□ -1.74
CASC4-206ENST00000558847 CX3CL1P78423 397 aa4.17□□□□□ -1.74
CASC4-206ENST00000558847 ZBTB17Q13105 803 aa4.17□□□□□ -1.74
CASC4-206ENST00000558847 ITGA7Q13683 1181 aa4.17□□□□□ -1.74
CASC4-206ENST00000558847 E2F5Q15329 346 aa4.17□□□□□ -1.74
CASC4-206ENST00000558847 MEP1BQ16820 701 aa4.17□□□□□ -1.74
CASC4-206ENST00000558847 NHSL2Q5HYW2 709 aa4.17□□□□□ -1.74
CASC4-206ENST00000558847 TCTE1Q5JU00 501 aa4.17□□□□□ -1.74
CASC4-206ENST00000558847 PDSS1Q5T2R2 415 aa4.17□□□□□ -1.74
CASC4-206ENST00000558847 NOTUMQ6P988 496 aa4.17□□□□□ -1.74
CASC4-206ENST00000558847 PLXDC2Q6UX71 529 aa4.17□□□□□ -1.74
CASC4-206ENST00000558847 TUBA1AQ71U36 451 aa4.17□□□□□ -1.74
CASC4-206ENST00000558847 DGLUCYQ7Z3D6 616 aa4.17□□□□□ -1.74
CASC4-206ENST00000558847 SATL1Q86VE3 508 aa4.17□□□□□ -1.74
CASC4-206ENST00000558847 FAM114A1Q8IWE2 563 aa4.17□□□□□ -1.74
CASC4-206ENST00000558847 KLHL7Q8IXQ5 586 aa4.17□□□□□ -1.74
CASC4-206ENST00000558847 CFAP206Q8IYR0 622 aa4.17□□□□□ -1.74
CASC4-206ENST00000558847 SPATA3Q8NHX4 192 aa4.17□□□□□ -1.74
CASC4-206ENST00000558847 GRK7Q8WTQ7 553 aa4.17□□□□□ -1.74
CASC4-206ENST00000558847 ZFAND2BQ8WV99 257 aa4.17□□□□□ -1.74
CASC4-206ENST00000558847 NEUROG1Q92886 237 aa4.17□□□□□ -1.74
CASC4-206ENST00000558847 IGSF21Q96ID5 467 aa4.17□□□□□ -1.74
CASC4-206ENST00000558847 THOC3Q96J01 351 aaKnown RBP4.17□□□□□ -1.74
CASC4-206ENST00000558847 TUBA1CQ9BQE3 449 aa4.17□□□□□ -1.74
CASC4-206ENST00000558847 GPATCH1Q9BRR8 931 aaKnown RBP4.17□□□□□ -1.74
CASC4-206ENST00000558847 VN1R1Q9GZP7 353 aa4.17□□□□□ -1.74
CASC4-206ENST00000558847 C6orf106Q9H6K1 298 aaPredicted RBP4.17□□□□□ -1.74
CASC4-206ENST00000558847 APOBEC3GQ9HC16 384 aaKnown RBP4.17□□□□□ -1.74
CASC4-206ENST00000558847 TRPC7Q9HCX4 862 aa4.17□□□□□ -1.74
CASC4-206ENST00000558847 MYNNQ9NPC7 610 aa4.17□□□□□ -1.74
CASC4-206ENST00000558847 SERINC1Q9NRX5 453 aa4.17□□□□□ -1.74
CASC4-206ENST00000558847 OSER1Q9NX31 292 aa4.17□□□□□ -1.74
CASC4-206ENST00000558847 CHCHD3Q9NX63 227 aaKnown RBP4.17□□□□□ -1.74
CASC4-206ENST00000558847 VPS18Q9P253 973 aa4.17□□□□□ -1.74
CASC4-206ENST00000558847 TXNDC16Q9P2K2 825 aa4.17□□□□□ -1.74
CASC4-206ENST00000558847 ARMCX3Q9UH62 379 aaPredicted RBP4.17□□□□□ -1.74
CASC4-206ENST00000558847 A0A0U1RQK1 487 aa4.16□□□□□ -1.74
CASC4-206ENST00000558847 A0A1W2PPI3 338 aa4.16□□□□□ -1.74
CASC4-206ENST00000558847 ZNF320A2RRD8 509 aa4.16□□□□□ -1.74
CASC4-206ENST00000558847 DENND3A2RUS2 1198 aa4.16□□□□□ -1.74
CASC4-206ENST00000558847 SRRM3A6NNA2 597 aaPredicted RBP4.16□□□□□ -1.74
CASC4-206ENST00000558847 H0YAE9 185 aa4.16□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms