RNA–Protein interactions for RNA: ENST00000558763.1

SMAD3-207, Transcript of SMAD family member 3, humanhuman

TSL 2

Gene SMAD3, Length 1,957 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-207ENST00000558763 FAM131CQ96AQ9 280 aa12.64□□□□□ -0.39
SMAD3-207ENST00000558763 CLDN23Q96B33 292 aa12.64□□□□□ -0.39
SMAD3-207ENST00000558763 TUBGCP3Q96CW5 907 aa12.64□□□□□ -0.39
SMAD3-207ENST00000558763 SIPA1Q96FS4 1042 aa12.64□□□□□ -0.39
SMAD3-207ENST00000558763 COX14Q96I36 57 aa12.64□□□□□ -0.39
SMAD3-207ENST00000558763 SLC45A3Q96JT2 553 aa12.64□□□□□ -0.39
SMAD3-207ENST00000558763 NTMT1Q9BV86 223 aa12.64□□□□□ -0.39
SMAD3-207ENST00000558763 OSBPL6Q9BZF3 934 aa12.64□□□□□ -0.39
SMAD3-207ENST00000558763 CHRDQ9H2X0 955 aa12.64□□□□□ -0.39
SMAD3-207ENST00000558763 POLMQ9NP87 494 aaPredicted RBP12.64□□□□□ -0.39
SMAD3-207ENST00000558763 CD93Q9NPY3 652 aa12.64□□□□□ -0.39
SMAD3-207ENST00000558763 SLC52A3Q9NQ40 469 aa12.64□□□□□ -0.39
SMAD3-207ENST00000558763 SDR39U1Q9NRG7 319 aaPredicted RBP12.64□□□□□ -0.39
SMAD3-207ENST00000558763 MRGBPQ9NV56 204 aa12.64□□□□□ -0.39
SMAD3-207ENST00000558763 ARL15Q9NXU5 204 aa12.64□□□□□ -0.39
SMAD3-207ENST00000558763 OPTCQ9UBM4 332 aa12.64□□□□□ -0.39
SMAD3-207ENST00000558763 L3MBTL1Q9Y468 752 aa12.64□□□□□ -0.39
SMAD3-207ENST00000558763 GPR45Q9Y5Y3 372 aa12.64□□□□□ -0.39
SMAD3-207ENST00000558763 ARHGEF33A8MVX0 844 aa12.63□□□□□ -0.39
SMAD3-207ENST00000558763 PI15O43692 258 aa12.63□□□□□ -0.39
SMAD3-207ENST00000558763 AP1G1O43747 822 aa12.63□□□□□ -0.39
SMAD3-207ENST00000558763 PRAMEF4O60810 478 aa12.63□□□□□ -0.39
SMAD3-207ENST00000558763 STK16O75716 305 aa12.63□□□□□ -0.39
SMAD3-207ENST00000558763 ANXA5P08758 320 aa12.63□□□□□ -0.39
SMAD3-207ENST00000558763 HGFP14210 728 aa12.63□□□□□ -0.39
SMAD3-207ENST00000558763 GABRG2P18507 467 aa12.63□□□□□ -0.39
SMAD3-207ENST00000558763 C5AR1P21730 350 aa12.63□□□□□ -0.39
SMAD3-207ENST00000558763 DGKEP52429 567 aa12.63□□□□□ -0.39
SMAD3-207ENST00000558763 DIO3P55073 304 aa12.63□□□□□ -0.39
SMAD3-207ENST00000558763 MTTPP55157 894 aa12.63□□□□□ -0.39
SMAD3-207ENST00000558763 ACTR3P61158 418 aa12.63□□□□□ -0.39
SMAD3-207ENST00000558763 TBL3Q12788 808 aaKnown RBP12.63□□□□□ -0.39
SMAD3-207ENST00000558763 MTAPQ13126 283 aa12.63□□□□□ -0.39
SMAD3-207ENST00000558763 AGKQ53H12 422 aa12.63□□□□□ -0.39
SMAD3-207ENST00000558763 PRAMEF9Q5VWM5 478 aa12.63□□□□□ -0.39
SMAD3-207ENST00000558763 RAET1GQ6H3X3 334 aa12.63□□□□□ -0.39
SMAD3-207ENST00000558763 TMEM220Q6QAJ8 160 aa12.63□□□□□ -0.39
SMAD3-207ENST00000558763 RIPOR1Q6ZS17 1223 aa12.63□□□□□ -0.39
SMAD3-207ENST00000558763 RNF165Q6ZSG1 346 aa12.63□□□□□ -0.39
SMAD3-207ENST00000558763 NET1Q7Z628 596 aaPredicted RBP12.63□□□□□ -0.39
SMAD3-207ENST00000558763 SLC22A15Q8IZD6 547 aa12.63□□□□□ -0.39
SMAD3-207ENST00000558763 PGBD3Q8N328 593 aa12.63□□□□□ -0.39
SMAD3-207ENST00000558763 SFRP1Q8N474 314 aa12.63□□□□□ -0.39
SMAD3-207ENST00000558763 HDDC3Q8N4P3 179 aa12.63□□□□□ -0.39
SMAD3-207ENST00000558763 EFCAB3Q8N7B9 438 aa12.63□□□□□ -0.39
SMAD3-207ENST00000558763 KYQ8NBH2 561 aa12.63□□□□□ -0.39
SMAD3-207ENST00000558763 NPAS2Q99743 824 aa12.63□□□□□ -0.39
SMAD3-207ENST00000558763 CCM2Q9BSQ5 444 aa12.63□□□□□ -0.39
SMAD3-207ENST00000558763 OR2AG1Q9H205 316 aa12.63□□□□□ -0.39
SMAD3-207ENST00000558763 CCDC167Q9P0B6 97 aa12.63□□□□□ -0.39
SMAD3-207ENST00000558763 LZTS3O60299 673 aaPredicted RBP12.63□□□□□ -0.39
SMAD3-207ENST00000558763 VPS4BO75351 444 aa12.63□□□□□ -0.39
SMAD3-207ENST00000558763 CRCPO75575 148 aa12.63□□□□□ -0.39
SMAD3-207ENST00000558763 PDE5AO76074 875 aa12.63□□□□□ -0.39
SMAD3-207ENST00000558763 ACADMP11310 421 aa12.63□□□□□ -0.39
SMAD3-207ENST00000558763 CCND1P24385 295 aa12.63□□□□□ -0.39
SMAD3-207ENST00000558763 PDHA2P29803 388 aa12.63□□□□□ -0.39
SMAD3-207ENST00000558763 GPR1P46091 355 aa12.63□□□□□ -0.39
SMAD3-207ENST00000558763 CCNG1P51959 295 aa12.63□□□□□ -0.39
SMAD3-207ENST00000558763 LRP8Q14114 963 aa12.63□□□□□ -0.39
SMAD3-207ENST00000558763 NEK5Q6P3R8 708 aa12.63□□□□□ -0.39
SMAD3-207ENST00000558763 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP12.63□□□□□ -0.39
SMAD3-207ENST00000558763 LRRC70Q7Z2Q7 622 aa12.63□□□□□ -0.39
SMAD3-207ENST00000558763 C11orf96Q7Z7L8 435 aa12.63□□□□□ -0.39
SMAD3-207ENST00000558763 CHCHD4Q8N4Q1 142 aa12.63□□□□□ -0.39
SMAD3-207ENST00000558763 TSTD1Q8NFU3 115 aa12.63□□□□□ -0.39
SMAD3-207ENST00000558763 METTL6Q8TCB7 284 aa12.63□□□□□ -0.39
SMAD3-207ENST00000558763 HBEGFQ99075 208 aa12.63□□□□□ -0.39
SMAD3-207ENST00000558763 BRINP2Q9C0B6 783 aa12.63□□□□□ -0.39
SMAD3-207ENST00000558763 AIG1Q9NVV5 245 aa12.63□□□□□ -0.39
SMAD3-207ENST00000558763 FBXL12Q9NXK8 326 aa12.63□□□□□ -0.39
SMAD3-207ENST00000558763 ATXN10Q9UBB4 475 aa12.63□□□□□ -0.39
SMAD3-207ENST00000558763 FAM8A1Q9UBU6 413 aa12.63□□□□□ -0.39
SMAD3-207ENST00000558763 KCNE1BA0A087WTH5 132 aa12.62□□□□□ -0.39
SMAD3-207ENST00000558763 LSM1O15116 133 aaKnown RBP12.62□□□□□ -0.39
SMAD3-207ENST00000558763 KATNA1O75449 491 aa12.62□□□□□ -0.39
SMAD3-207ENST00000558763 RPS9P46781 194 aaKnown RBP12.62□□□□□ -0.39
SMAD3-207ENST00000558763 AP1S2P56377 157 aa12.62□□□□□ -0.39
SMAD3-207ENST00000558763 ABRAXAS2Q15018 415 aa12.62□□□□□ -0.39
SMAD3-207ENST00000558763 AGERQ15109 404 aa12.62□□□□□ -0.39
SMAD3-207ENST00000558763 TRMT5Q32P41 509 aaKnown RBP12.62□□□□□ -0.39
SMAD3-207ENST00000558763 CCSMST1Q4G0I0 132 aa12.62□□□□□ -0.39
SMAD3-207ENST00000558763 TMEM31Q5JXX7 168 aa12.62□□□□□ -0.39
SMAD3-207ENST00000558763 C6orf136Q5SQH8 315 aa12.62□□□□□ -0.39
SMAD3-207ENST00000558763 REP15Q6BDI9 236 aa12.62□□□□□ -0.39
SMAD3-207ENST00000558763 C8orf82Q6P1X6 216 aaPredicted RBP12.62□□□□□ -0.39
SMAD3-207ENST00000558763 TTC23LQ6PF05 361 aa12.62□□□□□ -0.39
SMAD3-207ENST00000558763 ADAMTSL4Q6UY14 1074 aa12.62□□□□□ -0.39
SMAD3-207ENST00000558763 FAM124AQ86V42 546 aa12.62□□□□□ -0.39
SMAD3-207ENST00000558763 RETREG3Q86VR2 466 aa12.62□□□□□ -0.39
SMAD3-207ENST00000558763 HPS6Q86YV9 775 aa12.62□□□□□ -0.39
SMAD3-207ENST00000558763 PGAM4Q8N0Y7 254 aa12.62□□□□□ -0.39
SMAD3-207ENST00000558763 SPEM1Q8N4L4 309 aa12.62□□□□□ -0.39
SMAD3-207ENST00000558763 CXorf40AQ8TE69 158 aa12.62□□□□□ -0.39
SMAD3-207ENST00000558763 LINC00615Q96LM1 132 aaPredicted RBP12.62□□□□□ -0.39
SMAD3-207ENST00000558763 TEX37Q96LM6 180 aa12.62□□□□□ -0.39
SMAD3-207ENST00000558763 CCT7Q99832 543 aa12.62□□□□□ -0.39
SMAD3-207ENST00000558763 SLC32A1Q9H598 525 aa12.62□□□□□ -0.39
SMAD3-207ENST00000558763 TRPS1Q9UHF7 1281 aa12.62□□□□□ -0.39
SMAD3-207ENST00000558763 RNF11Q9Y3C5 154 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms