RNA–Protein interactions for RNA: ENST00000557884.5

USP3-205, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 3

Gene USP3, Length 958 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-205ENST00000557884 RASSF9O75901 435 aa13.92□□□□□ -0.18
USP3-205ENST00000557884 C1orf105O95561 183 aa13.92□□□□□ -0.18
USP3-205ENST00000557884 MPOP05164 745 aa13.92□□□□□ -0.18
USP3-205ENST00000557884 HGFP14210 728 aa13.92□□□□□ -0.18
USP3-205ENST00000557884 TAS2R39P59534 338 aa13.92□□□□□ -0.18
USP3-205ENST00000557884 GABREP78334 506 aa13.92□□□□□ -0.18
USP3-205ENST00000557884 SLMAPQ14BN4 828 aa13.92□□□□□ -0.18
USP3-205ENST00000557884 C16orf72Q14CZ0 275 aa13.92□□□□□ -0.18
USP3-205ENST00000557884 UAP1Q16222 522 aaPredicted RBP13.92□□□□□ -0.18
USP3-205ENST00000557884 TTC23LQ6PF05 361 aa13.92□□□□□ -0.18
USP3-205ENST00000557884 AMIGO1Q86WK6 493 aa13.92□□□□□ -0.18
USP3-205ENST00000557884 C2orf73Q8N5S3 287 aaPredicted RBP13.92□□□□□ -0.18
USP3-205ENST00000557884 EEF1AKMT1Q8WVE0 214 aa13.92□□□□□ -0.18
USP3-205ENST00000557884 LINGO1Q96FE5 620 aa13.92□□□□□ -0.18
USP3-205ENST00000557884 IL17FQ96PD4 163 aa13.92□□□□□ -0.18
USP3-205ENST00000557884 RBBP8Q99708 897 aa13.92□□□□□ -0.18
USP3-205ENST00000557884 MCMBPQ9BTE3 642 aa13.92□□□□□ -0.18
USP3-205ENST00000557884 CAB39LQ9H9S4 337 aa13.92□□□□□ -0.18
USP3-205ENST00000557884 SLC39A10Q9ULF5 831 aa13.92□□□□□ -0.18
USP3-205ENST00000557884 SATB2Q9UPW6 733 aa13.92□□□□□ -0.18
USP3-205ENST00000557884 LOXL2Q9Y4K0 774 aa13.92□□□□□ -0.18
USP3-205ENST00000557884 MN1Q10571 1320 aaPredicted RBP13.91□□□□□ -0.18
USP3-205ENST00000557884 CCDC187A0A096LP49 1063 aa13.91□□□□□ -0.18
USP3-205ENST00000557884 ARHGEF33A8MVX0 844 aa13.91□□□□□ -0.18
USP3-205ENST00000557884 BTN3A1O00481 513 aa13.91□□□□□ -0.18
USP3-205ENST00000557884 MATN4O95460 622 aa13.91□□□□□ -0.18
USP3-205ENST00000557884 MPC1LP0DKB6 136 aa13.91□□□□□ -0.18
USP3-205ENST00000557884 CBSLP0DN79 551 aa13.91□□□□□ -0.18
USP3-205ENST00000557884 ENO3P13929 434 aaPredicted RBP13.91□□□□□ -0.18
USP3-205ENST00000557884 CBSP35520 551 aa13.91□□□□□ -0.18
USP3-205ENST00000557884 SKIV2L2P42285 1042 aaKnown RBP13.91□□□□□ -0.18
USP3-205ENST00000557884 RGS4P49798 205 aa13.91□□□□□ -0.18
USP3-205ENST00000557884 SEPHS1P49903 392 aa13.91□□□□□ -0.18
USP3-205ENST00000557884 FOXK2Q01167 660 aa13.91□□□□□ -0.18
USP3-205ENST00000557884 PRKAA1Q13131 559 aa13.91□□□□□ -0.18
USP3-205ENST00000557884 NAB1Q13506 487 aa13.91□□□□□ -0.18
USP3-205ENST00000557884 GRB7Q14451 532 aa13.91□□□□□ -0.18
USP3-205ENST00000557884 EEF1AKMT2Q5JPI9 291 aaKnown RBP13.91□□□□□ -0.18
USP3-205ENST00000557884 CYHR1Q6ZMK1 362 aa13.91□□□□□ -0.18
USP3-205ENST00000557884 RAB11FIP2Q7L804 512 aa13.91□□□□□ -0.18
USP3-205ENST00000557884 TAX1BP1Q86VP1 789 aa13.91□□□□□ -0.18
USP3-205ENST00000557884 FBXO39Q8N4B4 442 aa13.91□□□□□ -0.18
USP3-205ENST00000557884 GATA6Q92908 595 aa13.91□□□□□ -0.18
USP3-205ENST00000557884 GRAMD1AQ96CP6 724 aa13.91□□□□□ -0.18
USP3-205ENST00000557884 ZDHHC12Q96GR4 267 aa13.91□□□□□ -0.18
USP3-205ENST00000557884 LIN37Q96GY3 246 aaPredicted RBP13.91□□□□□ -0.18
USP3-205ENST00000557884 PPM1MQ96MI6 270 aa13.91□□□□□ -0.18
USP3-205ENST00000557884 CYTH2Q99418 400 aa13.91□□□□□ -0.18
USP3-205ENST00000557884 ACSS3Q9H6R3 686 aa13.91□□□□□ -0.18
USP3-205ENST00000557884 PDP2Q9P2J9 529 aa13.91□□□□□ -0.18
USP3-205ENST00000557884 EPHA6Q9UF33 1036 aa13.91□□□□□ -0.18
USP3-205ENST00000557884 AK5Q9Y6K8 562 aa13.91□□□□□ -0.18
USP3-205ENST00000557884 PLD2O14939 933 aa13.9□□□□□ -0.18
USP3-205ENST00000557884 PSIP1O75475 530 aaKnown RBP13.9□□□□□ -0.18
USP3-205ENST00000557884 C9P02748 559 aa13.9□□□□□ -0.18
USP3-205ENST00000557884 CATP04040 527 aaKnown RBP13.9□□□□□ -0.18
USP3-205ENST00000557884 ITIH1P19827 911 aa13.9□□□□□ -0.18
USP3-205ENST00000557884 CD9P21926 228 aa13.9□□□□□ -0.18
USP3-205ENST00000557884 PKLRP30613 574 aa13.9□□□□□ -0.18
USP3-205ENST00000557884 CSTF2P33240 577 aaKnown RBP eCLIP13.9□□□□□ -0.18
USP3-205ENST00000557884 SHMT2P34897 504 aa13.9□□□□□ -0.18
USP3-205ENST00000557884 SPRP35270 261 aaPredicted RBP13.9□□□□□ -0.18
USP3-205ENST00000557884 CCNFP41002 786 aa13.9□□□□□ -0.18
USP3-205ENST00000557884 KPNA2P52292 529 aaKnown RBP13.9□□□□□ -0.18
USP3-205ENST00000557884 PMS2P54278 862 aa13.9□□□□□ -0.18
USP3-205ENST00000557884 SLC12A2P55011 1212 aa13.9□□□□□ -0.18
USP3-205ENST00000557884 IL2P60568 153 aa13.9□□□□□ -0.18
USP3-205ENST00000557884 VSNL1P62760 191 aa13.9□□□□□ -0.18
USP3-205ENST00000557884 TRA2AQ13595 282 aaKnown RBP eCLIP13.9□□□□□ -0.18
USP3-205ENST00000557884 USP10Q14694 798 aaKnown RBP13.9□□□□□ -0.18
USP3-205ENST00000557884 GRTP1Q5TC63 336 aa13.9□□□□□ -0.18
USP3-205ENST00000557884 CACHD1Q5VU97 1274 aa13.9□□□□□ -0.18
USP3-205ENST00000557884 FBXO38Q6PIJ6 1188 aa13.9□□□□□ -0.18
USP3-205ENST00000557884 TMEM207Q6UWW9 146 aa13.9□□□□□ -0.18
USP3-205ENST00000557884 NEK10Q6ZWH5 1172 aa13.9□□□□□ -0.18
USP3-205ENST00000557884 CEP97Q8IW35 865 aa13.9□□□□□ -0.18
USP3-205ENST00000557884 ADGRF3Q8IZF5 1079 aa13.9□□□□□ -0.18
USP3-205ENST00000557884 MYO1HQ8N1T3 1032 aa13.9□□□□□ -0.18
USP3-205ENST00000557884 WDR36Q8NI36 951 aaKnown RBP13.9□□□□□ -0.18
USP3-205ENST00000557884 RAD51AP1Q96B01 352 aa13.9□□□□□ -0.18
USP3-205ENST00000557884 NXPE2Q96DL1 559 aa13.9□□□□□ -0.18
USP3-205ENST00000557884 GPR22Q99680 433 aa13.9□□□□□ -0.18
USP3-205ENST00000557884 MAP3K3Q99759 626 aa13.9□□□□□ -0.18
USP3-205ENST00000557884 POLR1BQ9H9Y6 1135 aa13.9□□□□□ -0.18
USP3-205ENST00000557884 SPHK1Q9NYA1 384 aa13.9□□□□□ -0.18
USP3-205ENST00000557884 ACTR10Q9NZ32 417 aa13.9□□□□□ -0.18
USP3-205ENST00000557884 AKAP7Q9P0M2 348 aaPredicted RBP13.9□□□□□ -0.18
USP3-205ENST00000557884 PISDQ9UG56 409 aa13.9□□□□□ -0.18
USP3-205ENST00000557884 PIKFYVEQ9Y2I7 2098 aa13.9□□□□□ -0.18
USP3-205ENST00000557884 C1QTNF9BB2RNN3 333 aa13.89□□□□□ -0.19
USP3-205ENST00000557884 EIF3FO00303 357 aaPredicted RBP13.89□□□□□ -0.19
USP3-205ENST00000557884 RASGRF2O14827 1237 aa13.89□□□□□ -0.19
USP3-205ENST00000557884 PHGDHO43175 533 aaKnown RBP13.89□□□□□ -0.19
USP3-205ENST00000557884 KDM1AO60341 852 aa13.89□□□□□ -0.19
USP3-205ENST00000557884 TSPAN12O95859 305 aa13.89□□□□□ -0.19
USP3-205ENST00000557884 SYF2O95926 243 aaKnown RBP13.89□□□□□ -0.19
USP3-205ENST00000557884 ITGA2BP08514 1039 aa13.89□□□□□ -0.19
USP3-205ENST00000557884 CHRM5P08912 532 aaPredicted RBP13.89□□□□□ -0.19
USP3-205ENST00000557884 C1QTNF9P0C862 333 aa13.89□□□□□ -0.19
USP3-205ENST00000557884 JMJD7P0C870 316 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms