RNA–Protein interactions for RNA: ENST00000557673.5

NEK9-211, Transcript of NIMA related kinase 9, humanhuman

TSL 3

Gene NEK9, Length 657 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-211ENST00000557673 CAPZBP47756 277 aa16.2■□□□□ 0.18
NEK9-211ENST00000557673 CDKN1CP49918 316 aaPredicted RBP16.2■□□□□ 0.18
NEK9-211ENST00000557673 SH3BP2P78314 561 aa16.2■□□□□ 0.18
NEK9-211ENST00000557673 DNASE1L3Q13609 305 aa16.2■□□□□ 0.18
NEK9-211ENST00000557673 DNTTIP2Q5QJE6 756 aaKnown RBP16.2■□□□□ 0.18
NEK9-211ENST00000557673 CACHD1Q5VU97 1274 aa16.2■□□□□ 0.18
NEK9-211ENST00000557673 TMEM220Q6QAJ8 160 aa16.2■□□□□ 0.18
NEK9-211ENST00000557673 ABRAXAS1Q6UWZ7 409 aa16.2■□□□□ 0.18
NEK9-211ENST00000557673 ZDHHC24Q6UX98 284 aa16.2■□□□□ 0.18
NEK9-211ENST00000557673 WASH2PQ6VEQ5 465 aa16.2■□□□□ 0.18
NEK9-211ENST00000557673 FAM83HQ6ZRV2 1179 aaPredicted RBP16.2■□□□□ 0.18
NEK9-211ENST00000557673 DET1Q7L5Y6 550 aa16.2■□□□□ 0.18
NEK9-211ENST00000557673 TMEM135Q86UB9 458 aa16.2■□□□□ 0.18
NEK9-211ENST00000557673 AMZ2Q86W34 360 aa16.2■□□□□ 0.18
NEK9-211ENST00000557673 BPHLQ86WA6 291 aaPredicted RBP16.2■□□□□ 0.18
NEK9-211ENST00000557673 SERPINA9Q86WD7 417 aa16.2■□□□□ 0.18
NEK9-211ENST00000557673 BEND7Q8N7W2 519 aaPredicted RBP16.2■□□□□ 0.18
NEK9-211ENST00000557673 KLHL6Q8WZ60 621 aa16.2■□□□□ 0.18
NEK9-211ENST00000557673 ELMO2Q96JJ3 720 aa16.2■□□□□ 0.18
NEK9-211ENST00000557673 FCRL4Q96PJ5 515 aa16.2■□□□□ 0.18
NEK9-211ENST00000557673 FAM96AQ9H5X1 160 aa16.2■□□□□ 0.18
NEK9-211ENST00000557673 WASH6PQ9NQA3 447 aa16.2■□□□□ 0.18
NEK9-211ENST00000557673 EPHA6Q9UF33 1036 aa16.2■□□□□ 0.18
NEK9-211ENST00000557673 WDR37Q9Y2I8 494 aa16.2■□□□□ 0.18
NEK9-211ENST00000557673 SPTBN1Q01082 2364 aaKnown RBP16.2■□□□□ 0.18
NEK9-211ENST00000557673 NOTCH2Q04721 2471 aa16.2■□□□□ 0.18
NEK9-211ENST00000557673 ZCWPW2A0A1B0GU75 182 aa16.19■□□□□ 0.18
NEK9-211ENST00000557673 MAGEB16A2A368 324 aa16.19■□□□□ 0.18
NEK9-211ENST00000557673 TTLL8A6PVC2 850 aa16.19■□□□□ 0.18
NEK9-211ENST00000557673 E7ESA3 106 aa16.19■□□□□ 0.18
NEK9-211ENST00000557673 USP1O94782 785 aa16.19■□□□□ 0.18
NEK9-211ENST00000557673 PGAM1P18669 254 aa16.19■□□□□ 0.18
NEK9-211ENST00000557673 NR1D1P20393 614 aa16.19■□□□□ 0.18
NEK9-211ENST00000557673 MSH3P20585 1137 aa16.19■□□□□ 0.18
NEK9-211ENST00000557673 LEPRP48357 1165 aaKnown RBP16.19■□□□□ 0.18
NEK9-211ENST00000557673 CBLBQ13191 982 aa16.19■□□□□ 0.18
NEK9-211ENST00000557673 CRYMQ14894 314 aa16.19■□□□□ 0.18
NEK9-211ENST00000557673 TRADDQ15628 312 aa16.19■□□□□ 0.18
NEK9-211ENST00000557673 DBN1Q16643 649 aa16.19■□□□□ 0.18
NEK9-211ENST00000557673 ANKRD20A4Q4UJ75 823 aa16.19■□□□□ 0.18
NEK9-211ENST00000557673 GLE1Q53GS7 698 aaKnown RBP16.19■□□□□ 0.18
NEK9-211ENST00000557673 FHL5Q5TD97 284 aa16.19■□□□□ 0.18
NEK9-211ENST00000557673 AGAP9Q5VTM2 703 aa16.19■□□□□ 0.18
NEK9-211ENST00000557673 KLHL35Q6PF15 583 aa16.19■□□□□ 0.18
NEK9-211ENST00000557673 GALNT11Q8NCW6 608 aa16.19■□□□□ 0.18
NEK9-211ENST00000557673 OR6P1Q8NGX9 317 aa16.19■□□□□ 0.18
NEK9-211ENST00000557673 OR4L1Q8NH43 312 aa16.19■□□□□ 0.18
NEK9-211ENST00000557673 THAP4Q8WY91 577 aa16.19■□□□□ 0.18
NEK9-211ENST00000557673 TBRG4Q969Z0 631 aaKnown RBP eCLIP16.19■□□□□ 0.18
NEK9-211ENST00000557673 LRRC39Q96DD0 335 aa16.19■□□□□ 0.18
NEK9-211ENST00000557673 CXorf40BQ96DE9 158 aa16.19■□□□□ 0.18
NEK9-211ENST00000557673 COPS8Q99627 209 aa16.19■□□□□ 0.18
NEK9-211ENST00000557673 EBNA1BP2Q99848 306 aaKnown RBP16.19■□□□□ 0.18
NEK9-211ENST00000557673 GPR87Q9BY21 358 aa16.19■□□□□ 0.18
NEK9-211ENST00000557673 RAB33BQ9H082 229 aa16.19■□□□□ 0.18
NEK9-211ENST00000557673 SLC40A1Q9NP59 571 aa16.19■□□□□ 0.18
NEK9-211ENST00000557673 LHX9Q9NQ69 397 aa16.19■□□□□ 0.18
NEK9-211ENST00000557673 CATSPERZQ9NTU4 200 aa16.19■□□□□ 0.18
NEK9-211ENST00000557673 ZDHHC3Q9NYG2 299 aa16.19■□□□□ 0.18
NEK9-211ENST00000557673 DMGDHQ9UI17 866 aaKnown RBP16.19■□□□□ 0.18
NEK9-211ENST00000557673 CHMP2BQ9UQN3 213 aa16.19■□□□□ 0.18
NEK9-211ENST00000557673 TEX264Q9Y6I9 313 aa16.19■□□□□ 0.18
NEK9-211ENST00000557673 K7EM74 188 aa16.18■□□□□ 0.18
NEK9-211ENST00000557673 AGFG2O95081 481 aa16.18■□□□□ 0.18
NEK9-211ENST00000557673 VAPBO95292 243 aa16.18■□□□□ 0.18
NEK9-211ENST00000557673 FURINP09958 794 aa16.18■□□□□ 0.18
NEK9-211ENST00000557673 NELFEP18615 380 aaKnown RBP16.18■□□□□ 0.18
NEK9-211ENST00000557673 PAMP19021 973 aa16.18■□□□□ 0.18
NEK9-211ENST00000557673 ARCN1P48444 511 aaKnown RBP16.18■□□□□ 0.18
NEK9-211ENST00000557673 GUCY2DQ02846 1103 aa16.18■□□□□ 0.18
NEK9-211ENST00000557673 CAV1Q03135 178 aa16.18■□□□□ 0.18
NEK9-211ENST00000557673 DMPKQ09013 629 aa16.18■□□□□ 0.18
NEK9-211ENST00000557673 NFE2L1Q14494 772 aa16.18■□□□□ 0.18
NEK9-211ENST00000557673 SEMA3AQ14563 771 aa16.18■□□□□ 0.18
NEK9-211ENST00000557673 ITIH4Q14624 930 aa16.18■□□□□ 0.18
NEK9-211ENST00000557673 FASTKD3Q14CZ7 662 aaKnown RBP16.18■□□□□ 0.18
NEK9-211ENST00000557673 AARS2Q5JTZ9 985 aaKnown RBP16.18■□□□□ 0.18
NEK9-211ENST00000557673 IRGCQ6NXR0 463 aa16.18■□□□□ 0.18
NEK9-211ENST00000557673 PACS1Q6VY07 963 aa16.18■□□□□ 0.18
NEK9-211ENST00000557673 TAS2R42Q7RTR8 314 aa16.18■□□□□ 0.18
NEK9-211ENST00000557673 IGDCC3Q8IVU1 814 aa16.18■□□□□ 0.18
NEK9-211ENST00000557673 FBXO25Q8TCJ0 367 aa16.18■□□□□ 0.18
NEK9-211ENST00000557673 UBXN4Q92575 508 aa16.18■□□□□ 0.18
NEK9-211ENST00000557673 NAT9Q9BTE0 207 aa16.18■□□□□ 0.18
NEK9-211ENST00000557673 PHACTR1Q9C0D0 580 aa16.18■□□□□ 0.18
NEK9-211ENST00000557673 MARCH4Q9P2E8 410 aaPredicted RBP16.18■□□□□ 0.18
NEK9-211ENST00000557673 FAM8A1Q9UBU6 413 aa16.18■□□□□ 0.18
NEK9-211ENST00000557673 RARRES3Q9UL19 164 aa16.18■□□□□ 0.18
NEK9-211ENST00000557673 PSMD13Q9UNM6 376 aa16.18■□□□□ 0.18
NEK9-211ENST00000557673 CFAP99D6REC4 459 aa16.17■□□□□ 0.18
NEK9-211ENST00000557673 KCNJ13O60928 360 aa16.17■□□□□ 0.18
NEK9-211ENST00000557673 TTC4O95801 387 aa16.17■□□□□ 0.18
NEK9-211ENST00000557673 POLBP06746 335 aa16.17■□□□□ 0.18
NEK9-211ENST00000557673 ELK3P41970 407 aa16.17■□□□□ 0.18
NEK9-211ENST00000557673 HALP42357 657 aa16.17■□□□□ 0.18
NEK9-211ENST00000557673 PGDP52209 483 aa16.17■□□□□ 0.18
NEK9-211ENST00000557673 PLTPP55058 493 aa16.17■□□□□ 0.18
NEK9-211ENST00000557673 GPR18Q14330 331 aa16.17■□□□□ 0.18
NEK9-211ENST00000557673 FASTKD1Q53R41 847 aaKnown RBP16.17■□□□□ 0.18
NEK9-211ENST00000557673 FAM92BQ6ZTR7 304 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms