RNA–Protein interactions for RNA: ENST00000557275.5

SYNE3-205, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SYNE3, Length 13,488 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-205ENST00000557275 RSC1A1Q92681 617 aa8.69□□□□□ -1.02
SYNE3-205ENST00000557275 RCN3Q96D15 328 aa8.69□□□□□ -1.02
SYNE3-205ENST00000557275 ZBED3Q96IU2 234 aaPredicted RBP8.69□□□□□ -1.02
SYNE3-205ENST00000557275 SECISBP2Q96T21 854 aaKnown RBP8.69□□□□□ -1.02
SYNE3-205ENST00000557275 NR4A2P43354 598 aa8.69□□□□□ -1.02
SYNE3-205ENST00000557275 SLC6A9P48067 706 aa8.69□□□□□ -1.02
SYNE3-205ENST00000557275 CRISP3P54108 245 aa8.69□□□□□ -1.02
SYNE3-205ENST00000557275 DSG2Q14126 1118 aa8.69□□□□□ -1.02
SYNE3-205ENST00000557275 RPLP0P6Q8NHW5 317 aa8.69□□□□□ -1.02
SYNE3-205ENST00000557275 TUBG2Q9NRH3 451 aa8.69□□□□□ -1.02
SYNE3-205ENST00000557275 SDHAF3Q9NRP4 125 aa8.69□□□□□ -1.02
SYNE3-205ENST00000557275 GPRC5BQ9NZH0 403 aa8.69□□□□□ -1.02
SYNE3-205ENST00000557275 MINPP1Q9UNW1 487 aa8.69□□□□□ -1.02
SYNE3-205ENST00000557275 LYPLA1O75608 230 aaPredicted RBP8.69□□□□□ -1.02
SYNE3-205ENST00000557275 CTSHP09668 335 aa8.69□□□□□ -1.02
SYNE3-205ENST00000557275 TCEA1P23193 301 aaKnown RBP8.69□□□□□ -1.02
SYNE3-205ENST00000557275 SREBF1P36956 1147 aa8.69□□□□□ -1.02
SYNE3-205ENST00000557275 CCNFP41002 786 aa8.69□□□□□ -1.02
SYNE3-205ENST00000557275 DEFA6Q01524 100 aa8.69□□□□□ -1.02
SYNE3-205ENST00000557275 SCGB2B2Q4G0G5 96 aa8.69□□□□□ -1.02
SYNE3-205ENST00000557275 DDX51Q8N8A6 666 aaKnown RBP eCLIP8.69□□□□□ -1.02
SYNE3-205ENST00000557275 OR4L1Q8NH43 312 aa8.69□□□□□ -1.02
SYNE3-205ENST00000557275 LRFN1Q9P244 771 aa8.69□□□□□ -1.02
SYNE3-205ENST00000557275 ERVK-19Q9WJR5 959 aa8.69□□□□□ -1.02
SYNE3-205ENST00000557275 PLLPQ9Y342 182 aa8.69□□□□□ -1.02
SYNE3-205ENST00000557275 ZC3H13Q5T200 1668 aaKnown RBP8.69□□□□□ -1.02
SYNE3-205ENST00000557275 ZNF726A6NNF4 738 aa8.69□□□□□ -1.02
SYNE3-205ENST00000557275 USP12O75317 370 aa8.69□□□□□ -1.02
SYNE3-205ENST00000557275 IL7RP16871 459 aa8.69□□□□□ -1.02
SYNE3-205ENST00000557275 CDK18Q07002 472 aa8.69□□□□□ -1.02
SYNE3-205ENST00000557275 RPA4Q13156 261 aa8.69□□□□□ -1.02
SYNE3-205ENST00000557275 ZNF460Q14592 562 aa8.69□□□□□ -1.02
SYNE3-205ENST00000557275 HMGN3Q15651 99 aa8.69□□□□□ -1.02
SYNE3-205ENST00000557275 ZNF829Q3KNS6 432 aaPredicted RBP8.69□□□□□ -1.02
SYNE3-205ENST00000557275 SATL1Q86VE3 508 aa8.69□□□□□ -1.02
SYNE3-205ENST00000557275 CRYBG2Q8N1P7 616 aa8.69□□□□□ -1.02
SYNE3-205ENST00000557275 SYNPOQ8N3V7 929 aa8.69□□□□□ -1.02
SYNE3-205ENST00000557275 PAK1IP1Q9NWT1 392 aaPredicted RBP8.69□□□□□ -1.02
SYNE3-205ENST00000557275 CNTNAP2Q9UHC6 1331 aa8.69□□□□□ -1.02
SYNE3-205ENST00000557275 PRKYO43930 277 aa8.69□□□□□ -1.02
SYNE3-205ENST00000557275 CAPN15O75808 1086 aa8.69□□□□□ -1.02
SYNE3-205ENST00000557275 UPP2O95045 317 aa8.69□□□□□ -1.02
SYNE3-205ENST00000557275 MLIPQ5VWP3 458 aa8.69□□□□□ -1.02
SYNE3-205ENST00000557275 GLYATQ6IB77 296 aa8.69□□□□□ -1.02
SYNE3-205ENST00000557275 SEPT12Q8IYM1 358 aa8.69□□□□□ -1.02
SYNE3-205ENST00000557275 ZNF101Q8IZC7 436 aa8.69□□□□□ -1.02
SYNE3-205ENST00000557275 COPS8Q99627 209 aa8.69□□□□□ -1.02
SYNE3-205ENST00000557275 CIB1Q99828 191 aa8.69□□□□□ -1.02
SYNE3-205ENST00000557275 DISP2A7MBM2 1401 aa8.69□□□□□ -1.02
SYNE3-205ENST00000557275 OR2AG2A6NM03 316 aa8.69□□□□□ -1.02
SYNE3-205ENST00000557275 IDH3GP51553 393 aaPredicted RBP8.69□□□□□ -1.02
SYNE3-205ENST00000557275 BST1Q10588 318 aa8.69□□□□□ -1.02
SYNE3-205ENST00000557275 USP51Q70EK9 711 aa8.69□□□□□ -1.02
SYNE3-205ENST00000557275 HSFY1Q96LI6 401 aa8.69□□□□□ -1.02
SYNE3-205ENST00000557275 CENPOQ9BU64 300 aa8.69□□□□□ -1.02
SYNE3-205ENST00000557275 TMEM39BQ9GZU3 492 aa8.69□□□□□ -1.02
SYNE3-205ENST00000557275 FAM205CA6NFA0 338 aa8.69□□□□□ -1.02
SYNE3-205ENST00000557275 STK16O75716 305 aa8.69□□□□□ -1.02
SYNE3-205ENST00000557275 CCR10P46092 362 aa8.69□□□□□ -1.02
SYNE3-205ENST00000557275 ZNF267Q14586 743 aaPredicted RBP8.69□□□□□ -1.02
SYNE3-205ENST00000557275 GID4Q8IVV7 300 aa8.69□□□□□ -1.02
SYNE3-205ENST00000557275 OR6K6Q8NGW6 343 aa8.69□□□□□ -1.02
SYNE3-205ENST00000557275 MYO19Q96H55 970 aa8.69□□□□□ -1.02
SYNE3-205ENST00000557275 ZDHHC6Q9H6R6 413 aa8.69□□□□□ -1.02
SYNE3-205ENST00000557275 SNX15Q9NRS6 342 aa8.69□□□□□ -1.02
SYNE3-205ENST00000557275 MALT1Q9UDY8 824 aa8.69□□□□□ -1.02
SYNE3-205ENST00000557275 KIF25Q9UIL4 384 aa8.69□□□□□ -1.02
SYNE3-205ENST00000557275 HSPB11Q9Y547 144 aa8.69□□□□□ -1.02
SYNE3-205ENST00000557275 XPNPEP2O43895 674 aa8.69□□□□□ -1.02
SYNE3-205ENST00000557275 GPR139Q6DWJ6 353 aa8.69□□□□□ -1.02
SYNE3-205ENST00000557275 AUTS2Q8WXX7 1259 aa8.69□□□□□ -1.02
SYNE3-205ENST00000557275 OR51E2Q9H255 320 aa8.69□□□□□ -1.02
SYNE3-205ENST00000557275 TMEM165Q9HC07 324 aa8.69□□□□□ -1.02
SYNE3-205ENST00000557275 KLHL13Q9P2N7 655 aa8.69□□□□□ -1.02
SYNE3-205ENST00000557275 DNAJB9Q9UBS3 223 aa8.69□□□□□ -1.02
SYNE3-205ENST00000557275 HIF3AQ9Y2N7 669 aa8.69□□□□□ -1.02
SYNE3-205ENST00000557275 UGT1A9O60656 530 aa8.69□□□□□ -1.02
SYNE3-205ENST00000557275 ERAL1O75616 437 aaKnown RBP8.69□□□□□ -1.02
SYNE3-205ENST00000557275 UGT1A6P19224 532 aa8.69□□□□□ -1.02
SYNE3-205ENST00000557275 UGT1A1P22309 533 aa8.69□□□□□ -1.02
SYNE3-205ENST00000557275 UGT1A4P22310 534 aa8.69□□□□□ -1.02
SYNE3-205ENST00000557275 MPIP34949 423 aa8.69□□□□□ -1.02
SYNE3-205ENST00000557275 CD83Q01151 205 aa8.69□□□□□ -1.02
SYNE3-205ENST00000557275 KANK2Q63ZY3 851 aa8.69□□□□□ -1.02
SYNE3-205ENST00000557275 COX18Q8N8Q8 333 aa8.69□□□□□ -1.02
SYNE3-205ENST00000557275 ELMO3Q96BJ8 720 aa8.69□□□□□ -1.02
SYNE3-205ENST00000557275 LRRC3Q9BY71 257 aa8.69□□□□□ -1.02
SYNE3-205ENST00000557275 UCK2Q9BZX2 261 aa8.69□□□□□ -1.02
SYNE3-205ENST00000557275 UGT1A7Q9HAW7 530 aa8.69□□□□□ -1.02
SYNE3-205ENST00000557275 UGT1A10Q9HAW8 530 aa8.69□□□□□ -1.02
SYNE3-205ENST00000557275 UGT1A8Q9HAW9 530 aa8.69□□□□□ -1.02
SYNE3-205ENST00000557275 FAM237BA0A1B0GVD1 139 aa8.68□□□□□ -1.02
SYNE3-205ENST00000557275 ZNF157P51786 506 aaPredicted RBP8.68□□□□□ -1.02
SYNE3-205ENST00000557275 CNPY1Q3B7I2 92 aa8.68□□□□□ -1.02
SYNE3-205ENST00000557275 PTCHD3Q3KNS1 767 aa8.68□□□□□ -1.02
SYNE3-205ENST00000557275 C4orf19Q8IY42 314 aa8.68□□□□□ -1.02
SYNE3-205ENST00000557275 ZNF606Q8WXB4 792 aa8.68□□□□□ -1.02
SYNE3-205ENST00000557275 ZNF514Q96K75 400 aaPredicted RBP8.68□□□□□ -1.02
SYNE3-205ENST00000557275 ATF5Q9Y2D1 282 aaPredicted RBP8.68□□□□□ -1.02
SYNE3-205ENST00000557275 LRRC42Q9Y546 428 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms