RNA–Protein interactions for RNA: ENST00000556463.5

MARK3-210, Transcript of microtubule affinity regulating kinase 3, humanhuman

TSL 1 (best)

Gene MARK3, Length 3,584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-210ENST00000556463 UBP1Q9NZI7 540 aa8.41□□□□□ -1.06
MARK3-210ENST00000556463 USP22Q9UPT9 525 aa8.41□□□□□ -1.06
MARK3-210ENST00000556463 TEX46H3BTG2 121 aa8.41□□□□□ -1.06
MARK3-210ENST00000556463 SLC1A7O00341 560 aa8.41□□□□□ -1.06
MARK3-210ENST00000556463 PDPK1O15530 556 aa8.41□□□□□ -1.06
MARK3-210ENST00000556463 KPNA6O60684 536 aa8.41□□□□□ -1.06
MARK3-210ENST00000556463 JCHAINP01591 159 aa8.41□□□□□ -1.06
MARK3-210ENST00000556463 CHRNA1P02708 482 aa8.41□□□□□ -1.06
MARK3-210ENST00000556463 PROS1P07225 676 aa8.41□□□□□ -1.06
MARK3-210ENST00000556463 RAP2AP10114 183 aa8.41□□□□□ -1.06
MARK3-210ENST00000556463 LBPP18428 481 aa8.41□□□□□ -1.06
MARK3-210ENST00000556463 FDXRP22570 491 aa8.41□□□□□ -1.06
MARK3-210ENST00000556463 TGFBR1P36897 503 aa8.41□□□□□ -1.06
MARK3-210ENST00000556463 ALDH7A1P49419 539 aaKnown RBP8.41□□□□□ -1.06
MARK3-210ENST00000556463 TPI1P60174 286 aa8.41□□□□□ -1.06
MARK3-210ENST00000556463 IL5RAQ01344 420 aa8.41□□□□□ -1.06
MARK3-210ENST00000556463 EMX1Q04741 257 aaPredicted RBP8.41□□□□□ -1.06
MARK3-210ENST00000556463 CD47Q08722 323 aa8.41□□□□□ -1.06
MARK3-210ENST00000556463 CSTF3Q12996 717 aaKnown RBP8.41□□□□□ -1.06
MARK3-210ENST00000556463 MRPL28Q13084 256 aaKnown RBP8.41□□□□□ -1.06
MARK3-210ENST00000556463 TNFAIP1Q13829 316 aa8.41□□□□□ -1.06
MARK3-210ENST00000556463 SYT16Q17RD7 645 aa8.41□□□□□ -1.06
MARK3-210ENST00000556463 ZNF544Q6NX49 715 aa8.41□□□□□ -1.06
MARK3-210ENST00000556463 CILP2Q8IUL8 1156 aa8.41□□□□□ -1.06
MARK3-210ENST00000556463 C8orf59Q8N0T1 100 aaPredicted RBP8.41□□□□□ -1.06
MARK3-210ENST00000556463 PPHLN1Q8NEY8 458 aaKnown RBP8.41□□□□□ -1.06
MARK3-210ENST00000556463 OR6B3Q8NGW1 331 aa8.41□□□□□ -1.06
MARK3-210ENST00000556463 TADA1Q96BN2 335 aa8.41□□□□□ -1.06
MARK3-210ENST00000556463 PHF21BQ96EK2 531 aa8.41□□□□□ -1.06
MARK3-210ENST00000556463 REXO5Q96IC2 774 aaKnown RBP8.41□□□□□ -1.06
MARK3-210ENST00000556463 ATOH8Q96SQ7 321 aa8.41□□□□□ -1.06
MARK3-210ENST00000556463 LRRC3Q9BY71 257 aa8.41□□□□□ -1.06
MARK3-210ENST00000556463 NXF2Q9GZY0 626 aaKnown RBP8.41□□□□□ -1.06
MARK3-210ENST00000556463 DUSP21Q9H596 190 aa8.41□□□□□ -1.06
MARK3-210ENST00000556463 GLOD4Q9HC38 313 aa8.41□□□□□ -1.06
MARK3-210ENST00000556463 RANGRFQ9HD47 186 aaPredicted RBP8.41□□□□□ -1.06
MARK3-210ENST00000556463 SLAMF8Q9P0V8 285 aa8.41□□□□□ -1.06
MARK3-210ENST00000556463 GIMAP2Q9UG22 337 aa8.41□□□□□ -1.06
MARK3-210ENST00000556463 FBXO10Q9UK96 956 aa8.41□□□□□ -1.06
MARK3-210ENST00000556463 CFL2Q9Y281 166 aa8.41□□□□□ -1.06
MARK3-210ENST00000556463 PRKAB1Q9Y478 270 aa8.41□□□□□ -1.06
MARK3-210ENST00000556463 TRAV20A0A0B4J274 112 aa8.41□□□□□ -1.06
MARK3-210ENST00000556463 A0A1B0GTL3 188 aa8.41□□□□□ -1.06
MARK3-210ENST00000556463 PABPN1LA6NDY0 278 aaKnown RBP8.41□□□□□ -1.06
MARK3-210ENST00000556463 ZNF99A8MXY4 864 aaPredicted RBP8.41□□□□□ -1.06
MARK3-210ENST00000556463 ARNTLO00327 626 aa8.41□□□□□ -1.06
MARK3-210ENST00000556463 AZIN1O14977 448 aa8.41□□□□□ -1.06
MARK3-210ENST00000556463 MAFKO60675 156 aa8.41□□□□□ -1.06
MARK3-210ENST00000556463 S1PR4O95977 384 aa8.41□□□□□ -1.06
MARK3-210ENST00000556463 MT-CYBP00156 380 aaPredicted RBP8.41□□□□□ -1.06
MARK3-210ENST00000556463 ICAM2P13598 275 aa8.41□□□□□ -1.06
MARK3-210ENST00000556463 WARSP23381 471 aaKnown RBP8.41□□□□□ -1.06
MARK3-210ENST00000556463 PRIM2P49643 509 aa8.41□□□□□ -1.06
MARK3-210ENST00000556463 PPP5CP53041 499 aa8.41□□□□□ -1.06
MARK3-210ENST00000556463 OR4D2P58180 307 aa8.41□□□□□ -1.06
MARK3-210ENST00000556463 GPR85P60893 370 aa8.41□□□□□ -1.06
MARK3-210ENST00000556463 PUDPQ08623 228 aa8.41□□□□□ -1.06
MARK3-210ENST00000556463 FADDQ13158 208 aa8.41□□□□□ -1.06
MARK3-210ENST00000556463 IL18R1Q13478 541 aa8.41□□□□□ -1.06
MARK3-210ENST00000556463 POU6F1Q14863 301 aa8.41□□□□□ -1.06
MARK3-210ENST00000556463 KDELC1Q6UW63 502 aa8.41□□□□□ -1.06
MARK3-210ENST00000556463 CLEC20AQ6ZU45 233 aa8.41□□□□□ -1.06
MARK3-210ENST00000556463 BBS7Q8IWZ6 715 aa8.41□□□□□ -1.06
MARK3-210ENST00000556463 SAMD14Q8IZD0 417 aaPredicted RBP8.41□□□□□ -1.06
MARK3-210ENST00000556463 SLC5A11Q8WWX8 675 aa8.41□□□□□ -1.06
MARK3-210ENST00000556463 TSPAN17Q96FV3 270 aa8.41□□□□□ -1.06
MARK3-210ENST00000556463 RNF145Q96MT1 663 aa8.41□□□□□ -1.06
MARK3-210ENST00000556463 SMOC2Q9H3U7 446 aa8.41□□□□□ -1.06
MARK3-210ENST00000556463 EVA1BQ9NVM1 165 aa8.41□□□□□ -1.06
MARK3-210ENST00000556463 SMPD4Q9NXE4 827 aa8.41□□□□□ -1.06
MARK3-210ENST00000556463 MAGEL2Q9UJ55 1249 aa8.41□□□□□ -1.06
MARK3-210ENST00000556463 MAGED1Q9Y5V3 778 aaPredicted RBP8.41□□□□□ -1.06
MARK3-210ENST00000556463 CIB4A0PJX0 185 aa8.4□□□□□ -1.06
MARK3-210ENST00000556463 SMLR1H3BR10 107 aa8.4□□□□□ -1.06
MARK3-210ENST00000556463 KLK8O60259 260 aa8.4□□□□□ -1.06
MARK3-210ENST00000556463 MRPS14O60783 128 aaKnown RBP8.4□□□□□ -1.06
MARK3-210ENST00000556463 ANXA9O76027 345 aa8.4□□□□□ -1.06
MARK3-210ENST00000556463 RECQL5O94762 991 aaPredicted RBP8.4□□□□□ -1.06
MARK3-210ENST00000556463 C1RP00736 705 aa8.4□□□□□ -1.06
MARK3-210ENST00000556463 CCNYL3P0C7X3 344 aa8.4□□□□□ -1.06
MARK3-210ENST00000556463 NPR3P17342 541 aa8.4□□□□□ -1.06
MARK3-210ENST00000556463 GGT1P19440 569 aa8.4□□□□□ -1.06
MARK3-210ENST00000556463 PLK1P53350 603 aa8.4□□□□□ -1.06
MARK3-210ENST00000556463 PTPN5P54829 565 aa8.4□□□□□ -1.06
MARK3-210ENST00000556463 ACVR1Q04771 509 aa8.4□□□□□ -1.06
MARK3-210ENST00000556463 CDK10Q15131 360 aa8.4□□□□□ -1.06
MARK3-210ENST00000556463 DCAF4L1Q3SXM0 396 aa8.4□□□□□ -1.06
MARK3-210ENST00000556463 NOL9Q5SY16 702 aaKnown RBP8.4□□□□□ -1.06
MARK3-210ENST00000556463 MANEALQ5VSG8 457 aa8.4□□□□□ -1.06
MARK3-210ENST00000556463 KLHL17Q6TDP4 642 aa8.4□□□□□ -1.06
MARK3-210ENST00000556463 DTWD1Q8N5C7 304 aa8.4□□□□□ -1.06
MARK3-210ENST00000556463 C18orf25Q96B23 403 aaPredicted RBP8.4□□□□□ -1.06
MARK3-210ENST00000556463 TBC1D20Q96BZ9 403 aa8.4□□□□□ -1.06
MARK3-210ENST00000556463 ERVMER34-1Q9H9K5 563 aa8.4□□□□□ -1.06
MARK3-210ENST00000556463 POPDC3Q9HBV1 291 aa8.4□□□□□ -1.06
MARK3-210ENST00000556463 ZIM2Q9NZV7 527 aa8.4□□□□□ -1.06
MARK3-210ENST00000556463 AASSQ9UDR5 926 aa8.4□□□□□ -1.06
MARK3-210ENST00000556463 PATJQ8NI35 1801 aa8.4□□□□□ -1.06
MARK3-210ENST00000556463 LRIG2O94898 1065 aa8.4□□□□□ -1.06
MARK3-210ENST00000556463 IGLV3-25P01717 112 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms