RNA–Protein interactions for RNA: ENST00000556063.1

TDP1-214, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene TDP1, Length 1,076 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-214ENST00000556063 TDRKHQ9Y2W6 561 aaKnown RBP7.44□□□□□ -1.22
TDP1-214ENST00000556063 CFAP20Q9Y6A4 193 aaKnown RBP7.44□□□□□ -1.22
TDP1-214ENST00000556063 RNF215Q9Y6U7 377 aa7.44□□□□□ -1.22
TDP1-214ENST00000556063 SPTBN2O15020 2390 aa7.44□□□□□ -1.22
TDP1-214ENST00000556063 UQCRHLA0A096LP55 91 aa7.43□□□□□ -1.22
TDP1-214ENST00000556063 LY6G6EA0A0G2JKS1 128 aa7.43□□□□□ -1.22
TDP1-214ENST00000556063 MATN2O00339 956 aa7.43□□□□□ -1.22
TDP1-214ENST00000556063 BTN3A1O00481 513 aa7.43□□□□□ -1.22
TDP1-214ENST00000556063 TM4SF5O14894 197 aa7.43□□□□□ -1.22
TDP1-214ENST00000556063 PPM1DO15297 605 aa7.43□□□□□ -1.22
TDP1-214ENST00000556063 RGS16O15492 202 aaPredicted RBP7.43□□□□□ -1.22
TDP1-214ENST00000556063 DUX1O43812 170 aa7.43□□□□□ -1.22
TDP1-214ENST00000556063 PSIP1O75475 530 aaKnown RBP7.43□□□□□ -1.22
TDP1-214ENST00000556063 RFPL3O75679 317 aa7.43□□□□□ -1.22
TDP1-214ENST00000556063 C1orf105O95561 183 aa7.43□□□□□ -1.22
TDP1-214ENST00000556063 ALDOAP04075 364 aaKnown RBP7.43□□□□□ -1.22
TDP1-214ENST00000556063 UQCRHP07919 91 aa7.43□□□□□ -1.22
TDP1-214ENST00000556063 ENO2P09104 434 aaPredicted RBP7.43□□□□□ -1.22
TDP1-214ENST00000556063 LTA4HP09960 611 aaKnown RBP7.43□□□□□ -1.22
TDP1-214ENST00000556063 MYZAPP0CAP1 466 aa7.43□□□□□ -1.22
TDP1-214ENST00000556063 CCDC166P0CW27 439 aa7.43□□□□□ -1.22
TDP1-214ENST00000556063 SHMT2P34897 504 aa7.43□□□□□ -1.22
TDP1-214ENST00000556063 ACADVLP49748 655 aa7.43□□□□□ -1.22
TDP1-214ENST00000556063 AP1S2P56377 157 aa7.43□□□□□ -1.22
TDP1-214ENST00000556063 SIM1P81133 766 aaPredicted RBP7.43□□□□□ -1.22
TDP1-214ENST00000556063 TIAL1Q01085 375 aaKnown RBP eCLIP7.43□□□□□ -1.22
TDP1-214ENST00000556063 PRKG2Q13237 762 aa7.43□□□□□ -1.22
TDP1-214ENST00000556063 GPR18Q14330 331 aa7.43□□□□□ -1.22
TDP1-214ENST00000556063 CSHL1Q14406 222 aa7.43□□□□□ -1.22
TDP1-214ENST00000556063 PUM1Q14671 1186 aaKnown RBP eCLIP7.43□□□□□ -1.22
TDP1-214ENST00000556063 NR1D2Q14995 579 aa7.43□□□□□ -1.22
TDP1-214ENST00000556063 ARHGAP19Q14CB8 494 aa7.43□□□□□ -1.22
TDP1-214ENST00000556063 TSNAXIP1Q2TAA8 658 aa7.43□□□□□ -1.22
TDP1-214ENST00000556063 KRT71Q3SY84 523 aa7.43□□□□□ -1.22
TDP1-214ENST00000556063 CCDC157Q569K6 752 aa7.43□□□□□ -1.22
TDP1-214ENST00000556063 DUS1LQ6P1R4 473 aaKnown RBP7.43□□□□□ -1.22
TDP1-214ENST00000556063 XKR5Q6UX68 686 aa7.43□□□□□ -1.22
TDP1-214ENST00000556063 CYHR1Q6ZMK1 362 aa7.43□□□□□ -1.22
TDP1-214ENST00000556063 FRA10AC1Q70Z53 315 aa7.43□□□□□ -1.22
TDP1-214ENST00000556063 UBE2R2Q712K3 238 aaPredicted RBP7.43□□□□□ -1.22
TDP1-214ENST00000556063 HDXQ7Z353 690 aa7.43□□□□□ -1.22
TDP1-214ENST00000556063 PIWIL4Q7Z3Z4 852 aaKnown RBP7.43□□□□□ -1.22
TDP1-214ENST00000556063 CMC1Q7Z7K0 106 aa7.43□□□□□ -1.22
TDP1-214ENST00000556063 OOSP2Q86WS3 158 aa7.43□□□□□ -1.22
TDP1-214ENST00000556063 SPNS2Q8IVW8 549 aa7.43□□□□□ -1.22
TDP1-214ENST00000556063 Q8N9G6 341 aaPredicted RBP7.43□□□□□ -1.22
TDP1-214ENST00000556063 FBXO15Q8NCQ5 510 aaPredicted RBP7.43□□□□□ -1.22
TDP1-214ENST00000556063 OR5AR1Q8NGP9 310 aa7.43□□□□□ -1.22
TDP1-214ENST00000556063 OR9A1PQ8NGU1 263 aa7.43□□□□□ -1.22
TDP1-214ENST00000556063 STAG3L4Q8TBR4 150 aa7.43□□□□□ -1.22
TDP1-214ENST00000556063 EPS8L3Q8TE67 593 aaKnown RBP7.43□□□□□ -1.22
TDP1-214ENST00000556063 ATL1Q8WXF7 558 aa7.43□□□□□ -1.22
TDP1-214ENST00000556063 ISL2Q96A47 359 aa7.43□□□□□ -1.22
TDP1-214ENST00000556063 CCDC3Q9BQI4 270 aa7.43□□□□□ -1.22
TDP1-214ENST00000556063 SLC12A9Q9BXP2 914 aa7.43□□□□□ -1.22
TDP1-214ENST00000556063 ACBD3Q9H3P7 528 aa7.43□□□□□ -1.22
TDP1-214ENST00000556063 SRMSQ9H3Y6 488 aa7.43□□□□□ -1.22
TDP1-214ENST00000556063 TFB2MQ9H5Q4 396 aaKnown RBP7.43□□□□□ -1.22
TDP1-214ENST00000556063 PARVBQ9HBI1 364 aa7.43□□□□□ -1.22
TDP1-214ENST00000556063 SPATA7Q9P0W8 599 aa7.43□□□□□ -1.22
TDP1-214ENST00000556063 CAMSAP3Q9P1Y5 1249 aaPredicted RBP7.43□□□□□ -1.22
TDP1-214ENST00000556063 NOVA2Q9UNW9 492 aaKnown RBP7.43□□□□□ -1.22
TDP1-214ENST00000556063 U3KQA8 63 aa7.43□□□□□ -1.22
TDP1-214ENST00000556063 ZNF292O60281 2723 aa7.43□□□□□ -1.22
TDP1-214ENST00000556063 HMX2A2RU54 273 aa7.42□□□□□ -1.22
TDP1-214ENST00000556063 SYCE1LA8MT33 242 aa7.42□□□□□ -1.22
TDP1-214ENST00000556063 ARHGEF33A8MVX0 844 aa7.42□□□□□ -1.22
TDP1-214ENST00000556063 TMX2-CTNND1H3BSU7 103 aa7.42□□□□□ -1.22
TDP1-214ENST00000556063 GFYI3L273 518 aa7.42□□□□□ -1.22
TDP1-214ENST00000556063 UBXN7O94888 489 aa7.42□□□□□ -1.22
TDP1-214ENST00000556063 KLHL2O95198 593 aa7.42□□□□□ -1.22
TDP1-214ENST00000556063 KCNK5O95279 499 aa7.42□□□□□ -1.22
TDP1-214ENST00000556063 CPNE6O95741 557 aa7.42□□□□□ -1.22
TDP1-214ENST00000556063 TSPAN12O95859 305 aa7.42□□□□□ -1.22
TDP1-214ENST00000556063 SYF2O95926 243 aaKnown RBP7.42□□□□□ -1.22
TDP1-214ENST00000556063 S100BP04271 92 aaPredicted RBP7.42□□□□□ -1.22
TDP1-214ENST00000556063 RPLP0P05388 317 aaKnown RBP7.42□□□□□ -1.22
TDP1-214ENST00000556063 PROS1P07225 676 aa7.42□□□□□ -1.22
TDP1-214ENST00000556063 GSTA1P08263 222 aa7.42□□□□□ -1.22
TDP1-214ENST00000556063 RBP1P09455 135 aa7.42□□□□□ -1.22
TDP1-214ENST00000556063 SLC35E2BP0CK96 405 aa7.42□□□□□ -1.22
TDP1-214ENST00000556063 MYF5P13349 255 aa7.42□□□□□ -1.22
TDP1-214ENST00000556063 H2AFXP16104 143 aaPredicted RBP7.42□□□□□ -1.22
TDP1-214ENST00000556063 GCAP28676 217 aa7.42□□□□□ -1.22
TDP1-214ENST00000556063 MAGEA12P43365 314 aa7.42□□□□□ -1.22
TDP1-214ENST00000556063 BDKRB1P46663 353 aa7.42□□□□□ -1.22
TDP1-214ENST00000556063 RAB28P51157 221 aa7.42□□□□□ -1.22
TDP1-214ENST00000556063 OR1D5P58170 312 aa7.42□□□□□ -1.22
TDP1-214ENST00000556063 SQSTM1Q13501 440 aa7.42□□□□□ -1.22
TDP1-214ENST00000556063 SPIDRQ14159 915 aa7.42□□□□□ -1.22
TDP1-214ENST00000556063 ZNF460Q14592 562 aa7.42□□□□□ -1.22
TDP1-214ENST00000556063 CASP8Q14790 479 aa7.42□□□□□ -1.22
TDP1-214ENST00000556063 ACAP2Q15057 778 aa7.42□□□□□ -1.22
TDP1-214ENST00000556063 AMZ1Q400G9 498 aa7.42□□□□□ -1.22
TDP1-214ENST00000556063 CDKL4Q5MAI5 379 aa7.42□□□□□ -1.22
TDP1-214ENST00000556063 CEP85LQ5SZL2 805 aa7.42□□□□□ -1.22
TDP1-214ENST00000556063 ANKS6Q68DC2 871 aa7.42□□□□□ -1.22
TDP1-214ENST00000556063 TMEM207Q6UWW9 146 aa7.42□□□□□ -1.22
TDP1-214ENST00000556063 SPRED1Q7Z699 444 aa7.42□□□□□ -1.22
TDP1-214ENST00000556063 AMIGO1Q86WK6 493 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms