RNA–Protein interactions for RNA: ENST00000556029.5

TMPO-212, Transcript of thymopoietin, human

TSL 1 (best) BASIC

Gene TMPO, Length 4,242 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TMPO-212	ENST00000556029	C8A	P07357	584 aa		12.07	□□□□□ -0.48
TMPO-212	ENST00000556029	HOXB8	P17481	243 aa	Predicted RBP	12.07	□□□□□ -0.48
TMPO-212	ENST00000556029	CYP2A7	P20853	494 aa		12.07	□□□□□ -0.48
TMPO-212	ENST00000556029	ATP4B	P51164	291 aa		12.07	□□□□□ -0.48
TMPO-212	ENST00000556029	SCD5	Q86SK9	330 aa		12.07	□□□□□ -0.48
TMPO-212	ENST00000556029	CROCCP3	Q8IVE0	287 aa		12.07	□□□□□ -0.48
TMPO-212	ENST00000556029	OR13C4	Q8NGS5	318 aa		12.07	□□□□□ -0.48
TMPO-212	ENST00000556029	FUBP3	Q96I24	572 aa	Known RBP eCLIP	12.07	□□□□□ -0.48	2e-9	■■■□□ 19.2
TMPO-212	ENST00000556029	APOLD1	Q96LR9	279 aa		12.07	□□□□□ -0.48
TMPO-212	ENST00000556029	NSUN5	Q96P11	429 aa	Known RBP	12.07	□□□□□ -0.48
TMPO-212	ENST00000556029	GFM1	Q96RP9	751 aa	Known RBP	12.07	□□□□□ -0.48
TMPO-212	ENST00000556029	SMG9	Q9H0W8	520 aa	Known RBP	12.07	□□□□□ -0.48
TMPO-212	ENST00000556029	RAI2	Q9Y5P3	530 aa		12.07	□□□□□ -0.48
TMPO-212	ENST00000556029	CEPT1	Q9Y6K0	416 aa		12.07	□□□□□ -0.48
TMPO-212	ENST00000556029	CCDC162P	A2VCL2	907 aa		12.06	□□□□□ -0.48
TMPO-212	ENST00000556029	UGT2B4	P06133	528 aa		12.06	□□□□□ -0.48
TMPO-212	ENST00000556029	GALT	P07902	379 aa		12.06	□□□□□ -0.48
TMPO-212	ENST00000556029	ANXA5	P08758	320 aa		12.06	□□□□□ -0.48
TMPO-212	ENST00000556029	ALDOC	P09972	364 aa	Known RBP	12.06	□□□□□ -0.48
TMPO-212	ENST00000556029	IDO1	P14902	403 aa		12.06	□□□□□ -0.48
TMPO-212	ENST00000556029	CD1D	P15813	335 aa		12.06	□□□□□ -0.48
TMPO-212	ENST00000556029	SERPINA4	P29622	427 aa		12.06	□□□□□ -0.48
TMPO-212	ENST00000556029	SLC5A2	P31639	672 aa		12.06	□□□□□ -0.48
TMPO-212	ENST00000556029	MC4R	P32245	332 aa		12.06	□□□□□ -0.48
TMPO-212	ENST00000556029	TTK	P33981	857 aa		12.06	□□□□□ -0.48
TMPO-212	ENST00000556029	PGF	P49763	221 aa		12.06	□□□□□ -0.48
TMPO-212	ENST00000556029	RTP2	Q5QGT7	225 aa		12.06	□□□□□ -0.48
TMPO-212	ENST00000556029	HACD2	Q6Y1H2	254 aa		12.06	□□□□□ -0.48
TMPO-212	ENST00000556029	GPRIN3	Q6ZVF9	776 aa		12.06	□□□□□ -0.48
TMPO-212	ENST00000556029	DRAXIN	Q8NBI3	349 aa	Predicted RBP	12.06	□□□□□ -0.48
TMPO-212	ENST00000556029	OR2T12	Q8NG77	320 aa		12.06	□□□□□ -0.48
TMPO-212	ENST00000556029	HMGCLL1	Q8TB92	370 aa		12.06	□□□□□ -0.48
TMPO-212	ENST00000556029	SLCO4A1	Q96BD0	722 aa		12.06	□□□□□ -0.48
TMPO-212	ENST00000556029	LRCH3	Q96II8	777 aa		12.06	□□□□□ -0.48
TMPO-212	ENST00000556029	ADI1	Q9BV57	179 aa		12.06	□□□□□ -0.48
TMPO-212	ENST00000556029	ERGIC3	Q9Y282	383 aa		12.06	□□□□□ -0.48
TMPO-212	ENST00000556029	LOC110117498-PIK3R3	F6TDL0	507 aa		12.06	□□□□□ -0.48
TMPO-212	ENST00000556029		H3BMM5	538 aa		12.06	□□□□□ -0.48
TMPO-212	ENST00000556029	NME4	O00746	187 aa		12.06	□□□□□ -0.48
TMPO-212	ENST00000556029	CLDN11	O75508	207 aa		12.06	□□□□□ -0.48
TMPO-212	ENST00000556029	CCNK	O75909	580 aa		12.06	□□□□□ -0.48
TMPO-212	ENST00000556029	SERPINA1	P01009	418 aa		12.06	□□□□□ -0.48
TMPO-212	ENST00000556029	CSF2RA	P15509	400 aa		12.06	□□□□□ -0.48
TMPO-212	ENST00000556029	SLC26A3	P40879	764 aa		12.06	□□□□□ -0.48
TMPO-212	ENST00000556029	MAGEA10	P43363	369 aa	Predicted RBP	12.06	□□□□□ -0.48
TMPO-212	ENST00000556029	APLP1	P51693	650 aa		12.06	□□□□□ -0.48
TMPO-212	ENST00000556029	CLC	Q05315	142 aa		12.06	□□□□□ -0.48
TMPO-212	ENST00000556029	IL18R1	Q13478	541 aa		12.06	□□□□□ -0.48
TMPO-212	ENST00000556029	AHSA2	Q719I0	299 aa		12.06	□□□□□ -0.48
TMPO-212	ENST00000556029	EIF3M	Q7L2H7	374 aa	Known RBP	12.06	□□□□□ -0.48
TMPO-212	ENST00000556029	HJURP	Q8NCD3	748 aa	Predicted RBP	12.06	□□□□□ -0.48
TMPO-212	ENST00000556029	L3HYPDH	Q96EM0	354 aa		12.06	□□□□□ -0.48
TMPO-212	ENST00000556029	CCDC3	Q9BQI4	270 aa		12.06	□□□□□ -0.48
TMPO-212	ENST00000556029	KLHL31	Q9H511	634 aa		12.06	□□□□□ -0.48
TMPO-212	ENST00000556029	CD300A	Q9UGN4	299 aa		12.06	□□□□□ -0.48
TMPO-212	ENST00000556029	POLR3H	Q9Y535	204 aa	Predicted RBP	12.06	□□□□□ -0.48
TMPO-212	ENST00000556029	AQP12B	A6NM10	295 aa		12.06	□□□□□ -0.48
TMPO-212	ENST00000556029	HAT1	O14929	419 aa		12.06	□□□□□ -0.48
TMPO-212	ENST00000556029	SSNA1	O43805	119 aa		12.06	□□□□□ -0.48
TMPO-212	ENST00000556029	ZNF623	O75123	536 aa		12.06	□□□□□ -0.48
TMPO-212	ENST00000556029	XYLB	O75191	536 aa		12.06	□□□□□ -0.48
TMPO-212	ENST00000556029	VPS4B	O75351	444 aa		12.06	□□□□□ -0.48
TMPO-212	ENST00000556029	RPP40	O75818	363 aa	Known RBP	12.06	□□□□□ -0.48
TMPO-212	ENST00000556029	PENK	P01210	267 aa	Predicted RBP	12.06	□□□□□ -0.48
TMPO-212	ENST00000556029	MTHFD1	P11586	935 aa	Known RBP	12.06	□□□□□ -0.48
TMPO-212	ENST00000556029	GPX3	P22352	226 aa		12.06	□□□□□ -0.48
TMPO-212	ENST00000556029	PCSK6	P29122	969 aa		12.06	□□□□□ -0.48
TMPO-212	ENST00000556029	MAD2L1	Q13257	205 aa	Predicted RBP	12.06	□□□□□ -0.48
TMPO-212	ENST00000556029	FAM43B	Q6ZT52	329 aa	Predicted RBP	12.06	□□□□□ -0.48
TMPO-212	ENST00000556029	RETREG3	Q86VR2	466 aa		12.06	□□□□□ -0.48
TMPO-212	ENST00000556029	AQP12A	Q8IXF9	295 aa		12.06	□□□□□ -0.48
TMPO-212	ENST00000556029	C7orf61	Q8IZ16	206 aa		12.06	□□□□□ -0.48
TMPO-212	ENST00000556029	HM13	Q8TCT9	377 aa		12.06	□□□□□ -0.48
TMPO-212	ENST00000556029	LRRC58	Q96CX6	371 aa		12.06	□□□□□ -0.48
TMPO-212	ENST00000556029	LINGO1	Q96FE5	620 aa		12.06	□□□□□ -0.48
TMPO-212	ENST00000556029	DMRTB1	Q96MA1	342 aa		12.06	□□□□□ -0.48
TMPO-212	ENST00000556029	CHCHD6	Q9BRQ6	235 aa		12.06	□□□□□ -0.48
TMPO-212	ENST00000556029	ARNT2	Q9HBZ2	717 aa		12.06	□□□□□ -0.48
TMPO-212	ENST00000556029	TLR6	Q9Y2C9	796 aa		12.06	□□□□□ -0.48
TMPO-212	ENST00000556029	YIPF1	Q9Y548	306 aa		12.06	□□□□□ -0.48
TMPO-212	ENST00000556029	GJB5	O95377	273 aa		12.05	□□□□□ -0.48
TMPO-212	ENST00000556029	FGB	P02675	491 aa		12.05	□□□□□ -0.48
TMPO-212	ENST00000556029	LAG3	P18627	525 aa		12.05	□□□□□ -0.48
TMPO-212	ENST00000556029	POLR2E	P19388	210 aa	Known RBP	12.05	□□□□□ -0.48
TMPO-212	ENST00000556029	LPO	P22079	712 aa	Predicted RBP	12.05	□□□□□ -0.48
TMPO-212	ENST00000556029	ITPKA	P23677	461 aa		12.05	□□□□□ -0.48
TMPO-212	ENST00000556029	CDK9	P50750	372 aa	Known RBP	12.05	□□□□□ -0.48
TMPO-212	ENST00000556029	CBX2	Q14781	532 aa	Predicted RBP	12.05	□□□□□ -0.48
TMPO-212	ENST00000556029	ATAD3B	Q5T9A4	648 aa		12.05	□□□□□ -0.48
TMPO-212	ENST00000556029	HMBOX1	Q6NT76	420 aa		12.05	□□□□□ -0.48
TMPO-212	ENST00000556029	TMEM207	Q6UWW9	146 aa		12.05	□□□□□ -0.48
TMPO-212	ENST00000556029	CARM1	Q86X55	608 aa		12.05	□□□□□ -0.48
TMPO-212	ENST00000556029	PROSER1	Q86XN7	944 aa		12.05	□□□□□ -0.48
TMPO-212	ENST00000556029	ERI1	Q8IV48	349 aa	Known RBP	12.05	□□□□□ -0.48
TMPO-212	ENST00000556029	SLC15A3	Q8IY34	581 aa		12.05	□□□□□ -0.48
TMPO-212	ENST00000556029	UMODL1-AS1	Q8N2C9	162 aa		12.05	□□□□□ -0.48
TMPO-212	ENST00000556029	ANKFN1	Q8N957	763 aa		12.05	□□□□□ -0.48
TMPO-212	ENST00000556029	TRIM63	Q969Q1	353 aa		12.05	□□□□□ -0.48
TMPO-212	ENST00000556029	CENPN	Q96H22	339 aa	Predicted RBP	12.05	□□□□□ -0.48
TMPO-212	ENST00000556029	SPACA7	Q96KW9	195 aa		12.05	□□□□□ -0.48

Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms