RNA–Protein interactions for RNA: ENST00000555535.1

SRP54-207, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-207ENST00000555535 GAPDHSO14556 408 aaPredicted RBP2.35□□□□□ -2.03
SRP54-207ENST00000555535 ATP1A3P13637 1013 aa2.35□□□□□ -2.03
SRP54-207ENST00000555535 CX3CL1P78423 397 aa2.35□□□□□ -2.03
SRP54-207ENST00000555535 RFTN1Q14699 578 aaPredicted RBP2.35□□□□□ -2.03
SRP54-207ENST00000555535 ZSCAN23Q3MJ62 389 aa2.35□□□□□ -2.03
SRP54-207ENST00000555535 SLC25A53Q5H9E4 307 aa2.35□□□□□ -2.03
SRP54-207ENST00000555535 GKAP1Q5VSY0 366 aaPredicted RBP2.35□□□□□ -2.03
SRP54-207ENST00000555535 ZNF354CQ86Y25 554 aa2.35□□□□□ -2.03
SRP54-207ENST00000555535 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP2.35□□□□□ -2.03
SRP54-207ENST00000555535 GOLGA6L2Q8N9W4 650 aaPredicted RBP2.35□□□□□ -2.03
SRP54-207ENST00000555535 OR10G8Q8NGN5 311 aa2.35□□□□□ -2.03
SRP54-207ENST00000555535 OR13J1Q8NGT2 312 aa2.35□□□□□ -2.03
SRP54-207ENST00000555535 ARHGEF2Q92974 986 aaKnown RBP2.35□□□□□ -2.03
SRP54-207ENST00000555535 ERLEC1Q96DZ1 483 aa2.35□□□□□ -2.03
SRP54-207ENST00000555535 C16orf70Q9BSU1 422 aa2.35□□□□□ -2.03
SRP54-207ENST00000555535 S1PR5Q9H228 398 aa2.35□□□□□ -2.03
SRP54-207ENST00000555535 DNAJC18Q9H819 358 aa2.35□□□□□ -2.03
SRP54-207ENST00000555535 PDP2Q9P2J9 529 aa2.35□□□□□ -2.03
SRP54-207ENST00000555535 POMT2Q9UKY4 750 aa2.35□□□□□ -2.03
SRP54-207ENST00000555535 MTUS1Q9ULD2 1270 aa2.35□□□□□ -2.03
SRP54-207ENST00000555535 TNNQ9UQP3 1299 aa2.35□□□□□ -2.03
SRP54-207ENST00000555535 PPP2R2CQ9Y2T4 447 aa2.35□□□□□ -2.03
SRP54-207ENST00000555535 PCDHGA5Q9Y5G8 931 aa2.35□□□□□ -2.03
SRP54-207ENST00000555535 SEC23IPQ9Y6Y8 1000 aaKnown RBP2.35□□□□□ -2.03
SRP54-207ENST00000555535 A0A1W2PR77 199 aa2.34□□□□□ -2.03
SRP54-207ENST00000555535 CLEC3BP05452 202 aa2.34□□□□□ -2.03
SRP54-207ENST00000555535 ACTN1P12814 892 aa2.34□□□□□ -2.03
SRP54-207ENST00000555535 PRKACGP22612 351 aa2.34□□□□□ -2.03
SRP54-207ENST00000555535 SNRPEP62304 92 aaKnown RBP2.34□□□□□ -2.03
SRP54-207ENST00000555535 SQLEQ14534 574 aa2.34□□□□□ -2.03
SRP54-207ENST00000555535 MELKQ14680 651 aa2.34□□□□□ -2.03
SRP54-207ENST00000555535 ASTE1Q2TB18 679 aaPredicted RBP2.34□□□□□ -2.03
SRP54-207ENST00000555535 MOGAT2Q3SYC2 334 aa2.34□□□□□ -2.03
SRP54-207ENST00000555535 JADE1Q6IE81 842 aa2.34□□□□□ -2.03
SRP54-207ENST00000555535 SLC25A47Q6Q0C1 308 aa2.34□□□□□ -2.03
SRP54-207ENST00000555535 SLC47A2Q86VL8 602 aa2.34□□□□□ -2.03
SRP54-207ENST00000555535 FAM114A1Q8IWE2 563 aa2.34□□□□□ -2.03
SRP54-207ENST00000555535 NIPA2Q8N8Q9 360 aa2.34□□□□□ -2.03
SRP54-207ENST00000555535 TRIML1Q8N9V2 468 aa2.34□□□□□ -2.03
SRP54-207ENST00000555535 AQP11Q8NBQ7 271 aa2.34□□□□□ -2.03
SRP54-207ENST00000555535 VANGL1Q8TAA9 524 aaPredicted RBP2.34□□□□□ -2.03
SRP54-207ENST00000555535 MTERF3Q96E29 417 aa2.34□□□□□ -2.03
SRP54-207ENST00000555535 ZNF486Q96H40 463 aaPredicted RBP2.34□□□□□ -2.03
SRP54-207ENST00000555535 PITPNM3Q9BZ71 974 aa2.34□□□□□ -2.03
SRP54-207ENST00000555535 PUS3Q9BZE2 481 aaKnown RBP2.34□□□□□ -2.03
SRP54-207ENST00000555535 SHARPINQ9H0F6 387 aa2.34□□□□□ -2.03
SRP54-207ENST00000555535 PLK3Q9H4B4 646 aa2.34□□□□□ -2.03
SRP54-207ENST00000555535 KAT14Q9H8E8 782 aa2.34□□□□□ -2.03
SRP54-207ENST00000555535 OSER1Q9NX31 292 aa2.34□□□□□ -2.03
SRP54-207ENST00000555535 NENFQ9UMX5 172 aa2.34□□□□□ -2.03
SRP54-207ENST00000555535 CMAHPQ9Y471 501 aa2.34□□□□□ -2.03
SRP54-207ENST00000555535 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP2.34□□□□□ -2.039e-6■■■□□ 16.5
SRP54-207ENST00000555535 A0A1W2PR80 420 aa2.33□□□□□ -2.04
SRP54-207ENST00000555535 IGHV4-31P0DP07 118 aa2.33□□□□□ -2.04
SRP54-207ENST00000555535 FOLR2P14207 255 aa2.33□□□□□ -2.04
SRP54-207ENST00000555535 TMEM11P17152 192 aa2.33□□□□□ -2.04
SRP54-207ENST00000555535 BCL3P20749 454 aa2.33□□□□□ -2.04
SRP54-207ENST00000555535 CCR9P51686 369 aa2.33□□□□□ -2.04
SRP54-207ENST00000555535 HERV-K104P61576 105 aa2.33□□□□□ -2.04
SRP54-207ENST00000555535 ZFP36L1Q07352 338 aaKnown RBP2.33□□□□□ -2.04
SRP54-207ENST00000555535 DLG2Q15700 870 aa2.33□□□□□ -2.04
SRP54-207ENST00000555535 ITPRIPL2Q3MIP1 535 aa2.33□□□□□ -2.04
SRP54-207ENST00000555535 PHLDA2Q53GA4 152 aa2.33□□□□□ -2.04
SRP54-207ENST00000555535 NCEH1Q6PIU2 408 aa2.33□□□□□ -2.04
SRP54-207ENST00000555535 TMEM139Q8IV31 216 aa2.33□□□□□ -2.04
SRP54-207ENST00000555535 SCYL3Q8IZE3 742 aa2.33□□□□□ -2.04
SRP54-207ENST00000555535 C11orf45Q8TAV5 145 aa2.33□□□□□ -2.04
SRP54-207ENST00000555535 CNOT6LQ96LI5 555 aaKnown RBP2.33□□□□□ -2.04
SRP54-207ENST00000555535 C10orf90Q96M02 699 aa2.33□□□□□ -2.04
SRP54-207ENST00000555535 GAL3ST4Q96RP7 486 aa2.33□□□□□ -2.04
SRP54-207ENST00000555535 PPIL3Q9H2H8 161 aaKnown RBP2.33□□□□□ -2.04
SRP54-207ENST00000555535 PDCL3Q9H2J4 239 aa2.33□□□□□ -2.04
SRP54-207ENST00000555535 UBN1Q9NPG3 1134 aa2.33□□□□□ -2.04
SRP54-207ENST00000555535 SMC4Q9NTJ3 1288 aa2.33□□□□□ -2.04
SRP54-207ENST00000555535 MAN2C1Q9NTJ4 1040 aa2.33□□□□□ -2.04
SRP54-207ENST00000555535 EHD2Q9NZN4 543 aa2.33□□□□□ -2.04
SRP54-207ENST00000555535 GRID1Q9ULK0 1009 aa2.33□□□□□ -2.04
SRP54-207ENST00000555535 MTMR6Q9Y217 621 aa2.33□□□□□ -2.04
SRP54-207ENST00000555535 LAS1LQ9Y4W2 734 aaKnown RBP2.33□□□□□ -2.04
SRP54-207ENST00000555535 PIAS3Q9Y6X2 628 aa2.33□□□□□ -2.04
SRP54-207ENST00000555535 ACOD1A6NK06 481 aa2.32□□□□□ -2.04
SRP54-207ENST00000555535 LIPT2A6NK58 231 aa2.32□□□□□ -2.04
SRP54-207ENST00000555535 HEPACAM2A8MVW5 462 aa2.32□□□□□ -2.04
SRP54-207ENST00000555535 PI4K2BG5E9Z4 385 aa2.32□□□□□ -2.04
SRP54-207ENST00000555535 RARGP13631 454 aa2.32□□□□□ -2.04
SRP54-207ENST00000555535 PPM1FP49593 454 aaPredicted RBP2.32□□□□□ -2.04
SRP54-207ENST00000555535 CAMPP49913 170 aa2.32□□□□□ -2.04
SRP54-207ENST00000555535 TMEM50BP56557 158 aa2.32□□□□□ -2.04
SRP54-207ENST00000555535 CYCSP99999 105 aaKnown RBP2.32□□□□□ -2.04
SRP54-207ENST00000555535 IKQ13123 557 aaPredicted RBP2.32□□□□□ -2.04
SRP54-207ENST00000555535 MTF1Q14872 753 aa2.32□□□□□ -2.04
SRP54-207ENST00000555535 KIAA0930Q6ICG6 404 aaPredicted RBP2.32□□□□□ -2.04
SRP54-207ENST00000555535 TMEM207Q6UWW9 146 aa2.32□□□□□ -2.04
SRP54-207ENST00000555535 GPD1LQ8N335 351 aa2.32□□□□□ -2.04
SRP54-207ENST00000555535 TMTC2Q8N394 836 aa2.32□□□□□ -2.04
SRP54-207ENST00000555535 IRGQQ8WZA9 623 aa2.32□□□□□ -2.04
SRP54-207ENST00000555535 PDLIM5Q96HC4 596 aaKnown RBP2.32□□□□□ -2.04
SRP54-207ENST00000555535 NECTIN4Q96NY8 510 aa2.32□□□□□ -2.04
SRP54-207ENST00000555535 ZNF577Q9BSK1 485 aa2.32□□□□□ -2.04
SRP54-207ENST00000555535 NUP85Q9BW27 656 aa2.32□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms