RNA–Protein interactions for RNA: ENST00000554811.5

XRCC3-208, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 2

Gene XRCC3, Length 3,668 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-208ENST00000554811 TGFBR1P36897 503 aa11.62□□□□□ -0.55
XRCC3-208ENST00000554811 ALDH3A2P51648 485 aa11.62□□□□□ -0.55
XRCC3-208ENST00000554811 VEPH1Q14D04 833 aa11.62□□□□□ -0.55
XRCC3-208ENST00000554811 NECAB2Q7Z6G3 386 aa11.62□□□□□ -0.55
XRCC3-208ENST00000554811 ZDHHC21Q8IVQ6 265 aa11.62□□□□□ -0.55
XRCC3-208ENST00000554811 RAET1EQ8TD07 263 aa11.62□□□□□ -0.55
XRCC3-208ENST00000554811 ASPSCR1Q9BZE9 553 aa11.62□□□□□ -0.55
XRCC3-208ENST00000554811 RNF38Q9H0F5 515 aa11.62□□□□□ -0.55
XRCC3-208ENST00000554811 EXOSC4Q9NPD3 245 aaKnown RBP11.62□□□□□ -0.55
XRCC3-208ENST00000554811 SCHIP1Q9P0W5 487 aaPredicted RBP11.62□□□□□ -0.55
XRCC3-208ENST00000554811 MED16Q9Y2X0 877 aa11.62□□□□□ -0.55
XRCC3-208ENST00000554811 PCDHGA11Q9Y5H2 935 aa11.62□□□□□ -0.55
XRCC3-208ENST00000554811 M0R129 80 aa11.62□□□□□ -0.55
XRCC3-208ENST00000554811 PER2O15055 1255 aa11.62□□□□□ -0.55
XRCC3-208ENST00000554811 STK16O75716 305 aa11.62□□□□□ -0.55
XRCC3-208ENST00000554811 PENKP01210 267 aaPredicted RBP11.62□□□□□ -0.55
XRCC3-208ENST00000554811 KRT6AP02538 564 aa11.62□□□□□ -0.55
XRCC3-208ENST00000554811 C1QCP02747 245 aa11.62□□□□□ -0.55
XRCC3-208ENST00000554811 KRT6BP04259 564 aa11.62□□□□□ -0.55
XRCC3-208ENST00000554811 UGT2B4P06133 528 aa11.62□□□□□ -0.55
XRCC3-208ENST00000554811 CHRM5P08912 532 aaPredicted RBP11.62□□□□□ -0.55
XRCC3-208ENST00000554811 COX7A2P14406 83 aa11.62□□□□□ -0.55
XRCC3-208ENST00000554811 HOXB8P17481 243 aaPredicted RBP11.62□□□□□ -0.55
XRCC3-208ENST00000554811 MSH3P20585 1137 aa11.62□□□□□ -0.55
XRCC3-208ENST00000554811 TACR1P25103 407 aa11.62□□□□□ -0.55
XRCC3-208ENST00000554811 HTR7P34969 479 aa11.62□□□□□ -0.55
XRCC3-208ENST00000554811 KRT6CP48668 564 aa11.62□□□□□ -0.55
XRCC3-208ENST00000554811 ATP4BP51164 291 aa11.62□□□□□ -0.55
XRCC3-208ENST00000554811 PLA2G16P53816 162 aa11.62□□□□□ -0.55
XRCC3-208ENST00000554811 PDE12Q6L8Q7 609 aaKnown RBP11.62□□□□□ -0.55
XRCC3-208ENST00000554811 BTLAQ7Z6A9 289 aa11.62□□□□□ -0.55
XRCC3-208ENST00000554811 ADHFE1Q8IWW8 467 aa11.62□□□□□ -0.55
XRCC3-208ENST00000554811 NETO1Q8TDF5 533 aa11.62□□□□□ -0.55
XRCC3-208ENST00000554811 FOXJ1Q92949 421 aa11.62□□□□□ -0.55
XRCC3-208ENST00000554811 C8orf48Q96LL4 319 aa11.62□□□□□ -0.55
XRCC3-208ENST00000554811 SLC22A12Q96S37 553 aa11.62□□□□□ -0.55
XRCC3-208ENST00000554811 FUNDC2Q9BWH2 189 aa11.62□□□□□ -0.55
XRCC3-208ENST00000554811 TNS1Q9HBL0 1735 aaKnown RBP11.61□□□□□ -0.55
XRCC3-208ENST00000554811 IFRD1O00458 451 aaPredicted RBP11.61□□□□□ -0.55
XRCC3-208ENST00000554811 PFKLP17858 780 aa11.61□□□□□ -0.55
XRCC3-208ENST00000554811 SOAT1P35610 550 aa11.61□□□□□ -0.55
XRCC3-208ENST00000554811 CDH4P55283 916 aa11.61□□□□□ -0.55
XRCC3-208ENST00000554811 CYP4F8P98187 520 aa11.61□□□□□ -0.55
XRCC3-208ENST00000554811 CD300CQ08708 224 aa11.61□□□□□ -0.55
XRCC3-208ENST00000554811 GALNT1Q10472 559 aaPredicted RBP11.61□□□□□ -0.55
XRCC3-208ENST00000554811 PWP1Q13610 501 aa11.61□□□□□ -0.55
XRCC3-208ENST00000554811 HACD2Q6Y1H2 254 aa11.61□□□□□ -0.55
XRCC3-208ENST00000554811 UBE2R2Q712K3 238 aaPredicted RBP11.61□□□□□ -0.55
XRCC3-208ENST00000554811 PAGE2Q7Z2X7 111 aa11.61□□□□□ -0.55
XRCC3-208ENST00000554811 COLGALT2Q8IYK4 626 aa11.61□□□□□ -0.55
XRCC3-208ENST00000554811 FUBP3Q96I24 572 aaKnown RBP eCLIP11.61□□□□□ -0.55
XRCC3-208ENST00000554811 ERVK-18Q9QC07 812 aa11.61□□□□□ -0.55
XRCC3-208ENST00000554811 RAPGEFL1Q9UHV5 662 aa11.61□□□□□ -0.55
XRCC3-208ENST00000554811 C3orf18Q9UK00 162 aa11.61□□□□□ -0.55
XRCC3-208ENST00000554811 SLC22A14Q9Y267 594 aa11.61□□□□□ -0.55
XRCC3-208ENST00000554811 PLXNB2O15031 1838 aa11.61□□□□□ -0.55
XRCC3-208ENST00000554811 GLYATL1P3A0A0U1RQE8 302 aa11.61□□□□□ -0.55
XRCC3-208ENST00000554811 A0A1B0GVM2 712 aa11.61□□□□□ -0.55
XRCC3-208ENST00000554811 MATN4O95460 622 aa11.61□□□□□ -0.55
XRCC3-208ENST00000554811 PRLP01236 227 aa11.61□□□□□ -0.55
XRCC3-208ENST00000554811 ESR1P03372 595 aa11.61□□□□□ -0.55
XRCC3-208ENST00000554811 CDH3P22223 829 aa11.61□□□□□ -0.55
XRCC3-208ENST00000554811 DGKAP23743 735 aa11.61□□□□□ -0.55
XRCC3-208ENST00000554811 DNAJB1P25685 340 aa11.61□□□□□ -0.55
XRCC3-208ENST00000554811 PTGER3P43115 390 aa11.61□□□□□ -0.55
XRCC3-208ENST00000554811 EMP3P54852 163 aa11.61□□□□□ -0.55
XRCC3-208ENST00000554811 EMX2Q04743 252 aa11.61□□□□□ -0.55
XRCC3-208ENST00000554811 SPCS2Q15005 226 aa11.61□□□□□ -0.55
XRCC3-208ENST00000554811 NKG7Q16617 165 aa11.61□□□□□ -0.55
XRCC3-208ENST00000554811 Q6ZPB1 254 aaPredicted RBP11.61□□□□□ -0.55
XRCC3-208ENST00000554811 MRPL10Q7Z7H8 261 aaKnown RBP11.61□□□□□ -0.55
XRCC3-208ENST00000554811 SYTL1Q8IYJ3 562 aa11.61□□□□□ -0.55
XRCC3-208ENST00000554811 APCDD1Q8J025 514 aa11.61□□□□□ -0.55
XRCC3-208ENST00000554811 COX4I2Q96KJ9 171 aa11.61□□□□□ -0.55
XRCC3-208ENST00000554811 PKMYT1Q99640 499 aa11.61□□□□□ -0.55
XRCC3-208ENST00000554811 SLC6A13Q9NSD5 602 aa11.61□□□□□ -0.55
XRCC3-208ENST00000554811 ABCD2Q9UBJ2 740 aa11.61□□□□□ -0.55
XRCC3-208ENST00000554811 VPS51Q9UID3 782 aa11.61□□□□□ -0.55
XRCC3-208ENST00000554811 SARDHQ9UL12 918 aa11.61□□□□□ -0.55
XRCC3-208ENST00000554811 DLGAP4Q9Y2H0 992 aa11.61□□□□□ -0.55
XRCC3-208ENST00000554811 TNPO3Q9Y5L0 923 aaKnown RBP11.61□□□□□ -0.55
XRCC3-208ENST00000554811 SNX8Q9Y5X2 465 aa11.61□□□□□ -0.55
XRCC3-208ENST00000554811 DLGAP3O95886 979 aa11.61□□□□□ -0.55
XRCC3-208ENST00000554811 ATF6P18850 670 aa11.61□□□□□ -0.55
XRCC3-208ENST00000554811 SLC26A3P40879 764 aa11.61□□□□□ -0.55
XRCC3-208ENST00000554811 TCEA2Q15560 299 aa11.61□□□□□ -0.55
XRCC3-208ENST00000554811 SETMARQ53H47 684 aaPredicted RBP11.61□□□□□ -0.55
XRCC3-208ENST00000554811 CST9Q5W186 159 aa11.61□□□□□ -0.55
XRCC3-208ENST00000554811 ZNF773Q6PK81 442 aa11.61□□□□□ -0.55
XRCC3-208ENST00000554811 ZBTB2Q8N680 514 aa11.61□□□□□ -0.55
XRCC3-208ENST00000554811 CD320Q9NPF0 282 aa11.61□□□□□ -0.55
XRCC3-208ENST00000554811 FAM118AQ9NWS6 357 aa11.61□□□□□ -0.55
XRCC3-208ENST00000554811 SCN3BQ9NY72 215 aa11.61□□□□□ -0.55
XRCC3-208ENST00000554811 GPRC5BQ9NZH0 403 aa11.61□□□□□ -0.55
XRCC3-208ENST00000554811 SPASTQ9UBP0 616 aa11.61□□□□□ -0.55
XRCC3-208ENST00000554811 TESMINQ9Y4I5 508 aa11.61□□□□□ -0.55
XRCC3-208ENST00000554811 OTOFQ9HC10 1997 aa11.6□□□□□ -0.55
XRCC3-208ENST00000554811 LOC100130705A0A1B0GUX0 176 aa11.6□□□□□ -0.55
XRCC3-208ENST00000554811 SH3PXD2BA1X283 911 aa11.6□□□□□ -0.55
XRCC3-208ENST00000554811 CREG1O75629 220 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms