RNA–Protein interactions for RNA: ENST00000554467.5

SHMT2-212, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 3,416 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-212ENST00000554467 SERPINI1Q99574 410 aa11.44□□□□□ -0.58
SHMT2-212ENST00000554467 TMEM79Q9BSE2 394 aa11.44□□□□□ -0.58
SHMT2-212ENST00000554467 NUDT4Q9NZJ9 180 aa11.44□□□□□ -0.58
SHMT2-212ENST00000554467 RAB26Q9ULW5 256 aa11.44□□□□□ -0.58
SHMT2-212ENST00000554467 PPIL1Q9Y3C6 166 aa11.44□□□□□ -0.58
SHMT2-212ENST00000554467 ANGPTL3Q9Y5C1 460 aa11.44□□□□□ -0.58
SHMT2-212ENST00000554467 FADS3Q9Y5Q0 445 aa11.44□□□□□ -0.58
SHMT2-212ENST00000554467 SLC9A3R1O14745 358 aaPredicted RBP11.44□□□□□ -0.58
SHMT2-212ENST00000554467 MRASO14807 208 aa11.44□□□□□ -0.58
SHMT2-212ENST00000554467 NDUFB5O43674 189 aa11.44□□□□□ -0.58
SHMT2-212ENST00000554467 ADH1CP00326 375 aa11.44□□□□□ -0.58
SHMT2-212ENST00000554467 FSHRP23945 695 aa11.44□□□□□ -0.58
SHMT2-212ENST00000554467 VIPR1P32241 457 aa11.44□□□□□ -0.58
SHMT2-212ENST00000554467 PSME3P61289 254 aa11.44□□□□□ -0.58
SHMT2-212ENST00000554467 PTK2BQ14289 1009 aa11.44□□□□□ -0.58
SHMT2-212ENST00000554467 CRY1Q16526 586 aa11.44□□□□□ -0.58
SHMT2-212ENST00000554467 OGFOD2Q6N063 350 aa11.44□□□□□ -0.58
SHMT2-212ENST00000554467 BRAT1Q6PJG6 821 aa11.44□□□□□ -0.58
SHMT2-212ENST00000554467 PQLC1Q8N2U9 271 aa11.44□□□□□ -0.58
SHMT2-212ENST00000554467 PPWD1Q96BP3 646 aaKnown RBP11.44□□□□□ -0.58
SHMT2-212ENST00000554467 PKD2L2Q9NZM6 624 aa11.44□□□□□ -0.58
SHMT2-212ENST00000554467 MARK1Q9P0L2 795 aa11.44□□□□□ -0.58
SHMT2-212ENST00000554467 K7ESM1 405 aa11.43□□□□□ -0.58
SHMT2-212ENST00000554467 CAPN3P20807 821 aa11.43□□□□□ -0.58
SHMT2-212ENST00000554467 RPL10P27635 214 aaKnown RBP11.43□□□□□ -0.58
SHMT2-212ENST00000554467 ALDH3B2P48448 385 aa11.43□□□□□ -0.58
SHMT2-212ENST00000554467 ZNF423Q2M1K9 1284 aa11.43□□□□□ -0.58
SHMT2-212ENST00000554467 TXNDC11Q6PKC3 985 aa11.43□□□□□ -0.58
SHMT2-212ENST00000554467 NANOGNBQ7Z5D8 188 aa11.43□□□□□ -0.58
SHMT2-212ENST00000554467 KIAA0907Q7Z7F0 614 aaPredicted RBP11.43□□□□□ -0.58
SHMT2-212ENST00000554467 ASB2Q96Q27 587 aa11.43□□□□□ -0.58
SHMT2-212ENST00000554467 ARL15Q9NXU5 204 aa11.43□□□□□ -0.58
SHMT2-212ENST00000554467 PCDHGA7Q9Y5G6 932 aa11.43□□□□□ -0.58
SHMT2-212ENST00000554467 GOLGA4Q13439 2230 aaKnown RBP11.43□□□□□ -0.58
SHMT2-212ENST00000554467 VCANP13611 3396 aa11.43□□□□□ -0.58
SHMT2-212ENST00000554467 AGAP14A8MT82 685 aa11.43□□□□□ -0.58
SHMT2-212ENST00000554467 MLYCDO95822 493 aa11.43□□□□□ -0.58
SHMT2-212ENST00000554467 FAM58BPP0C7Q3 252 aa11.43□□□□□ -0.58
SHMT2-212ENST00000554467 ELFN1P0C7U0 828 aa11.43□□□□□ -0.58
SHMT2-212ENST00000554467 UROSP10746 265 aa11.43□□□□□ -0.58
SHMT2-212ENST00000554467 LBPP18428 481 aa11.43□□□□□ -0.58
SHMT2-212ENST00000554467 CD9P21926 228 aa11.43□□□□□ -0.58
SHMT2-212ENST00000554467 PREPP48147 710 aa11.43□□□□□ -0.58
SHMT2-212ENST00000554467 BCAP31P51572 246 aa11.43□□□□□ -0.58
SHMT2-212ENST00000554467 ERVK-21P61565 698 aa11.43□□□□□ -0.58
SHMT2-212ENST00000554467 ILF2Q12905 390 aaKnown RBP11.43□□□□□ -0.58
SHMT2-212ENST00000554467 DMC1Q14565 340 aa11.43□□□□□ -0.58
SHMT2-212ENST00000554467 ABRAXAS2Q15018 415 aa11.43□□□□□ -0.58
SHMT2-212ENST00000554467 ZXDCQ2QGD7 858 aaPredicted RBP11.43□□□□□ -0.58
SHMT2-212ENST00000554467 MAP7D1Q3KQU3 841 aa11.43□□□□□ -0.58
SHMT2-212ENST00000554467 ZNF805Q5CZA5 627 aa11.43□□□□□ -0.58
SHMT2-212ENST00000554467 PIGGQ5H8A4 983 aa11.43□□□□□ -0.58
SHMT2-212ENST00000554467 PGAM4Q8N0Y7 254 aa11.43□□□□□ -0.58
SHMT2-212ENST00000554467 LMNTD1Q8N9Z9 388 aa11.43□□□□□ -0.58
SHMT2-212ENST00000554467 FNDC5Q8NAU1 212 aa11.43□□□□□ -0.58
SHMT2-212ENST00000554467 JADE3Q92613 823 aa11.43□□□□□ -0.58
SHMT2-212ENST00000554467 SMARCD2Q92925 531 aa11.43□□□□□ -0.58
SHMT2-212ENST00000554467 PDLIM5Q96HC4 596 aaKnown RBP11.43□□□□□ -0.58
SHMT2-212ENST00000554467 DEC1Q9P2X7 70 aa11.43□□□□□ -0.58
SHMT2-212ENST00000554467 SLC8A2Q9UPR5 921 aa11.43□□□□□ -0.58
SHMT2-212ENST00000554467 K7EPI3 171 aa11.42□□□□□ -0.58
SHMT2-212ENST00000554467 ATP1B2P14415 290 aaPredicted RBP11.42□□□□□ -0.58
SHMT2-212ENST00000554467 CTSCP53634 463 aa11.42□□□□□ -0.58
SHMT2-212ENST00000554467 UFM1P61960 85 aa11.42□□□□□ -0.58
SHMT2-212ENST00000554467 HERC3Q15034 1050 aa11.42□□□□□ -0.58
SHMT2-212ENST00000554467 GAB4Q2WGN9 574 aa11.42□□□□□ -0.58
SHMT2-212ENST00000554467 PPP2R2DQ66LE6 453 aa11.42□□□□□ -0.58
SHMT2-212ENST00000554467 TMEM214Q6NUQ4 689 aaKnown RBP11.42□□□□□ -0.58
SHMT2-212ENST00000554467 UBE2R2Q712K3 238 aaPredicted RBP11.42□□□□□ -0.58
SHMT2-212ENST00000554467 LPCAT2Q7L5N7 544 aa11.42□□□□□ -0.58
SHMT2-212ENST00000554467 ELMO1Q92556 727 aa11.42□□□□□ -0.58
SHMT2-212ENST00000554467 OTUB2Q96DC9 234 aa11.42□□□□□ -0.58
SHMT2-212ENST00000554467 VPS50Q96JG6 964 aa11.42□□□□□ -0.58
SHMT2-212ENST00000554467 KXD1Q9BQD3 176 aa11.42□□□□□ -0.58
SHMT2-212ENST00000554467 RIMS3Q9UJD0 308 aa11.42□□□□□ -0.58
SHMT2-212ENST00000554467 OARD1Q9Y530 152 aa11.42□□□□□ -0.58
SHMT2-212ENST00000554467 USP34Q70CQ2 3546 aa11.42□□□□□ -0.58
SHMT2-212ENST00000554467 TBC1D3BA6NDS4 549 aa11.42□□□□□ -0.58
SHMT2-212ENST00000554467 NRP2O60462 931 aa11.42□□□□□ -0.58
SHMT2-212ENST00000554467 CHEK2O96017 543 aa11.42□□□□□ -0.58
SHMT2-212ENST00000554467 OR56A5P0C7T3 313 aa11.42□□□□□ -0.58
SHMT2-212ENST00000554467 RPIAP49247 311 aa11.42□□□□□ -0.58
SHMT2-212ENST00000554467 HMGCS1Q01581 520 aa11.42□□□□□ -0.58
SHMT2-212ENST00000554467 ABRQ12979 859 aa11.42□□□□□ -0.58
SHMT2-212ENST00000554467 LRP8Q14114 963 aa11.42□□□□□ -0.58
SHMT2-212ENST00000554467 LYPLAL1Q5VWZ2 237 aa11.42□□□□□ -0.58
SHMT2-212ENST00000554467 MILR1Q7Z6M3 343 aa11.42□□□□□ -0.58
SHMT2-212ENST00000554467 MIER2Q8N344 545 aa11.42□□□□□ -0.58
SHMT2-212ENST00000554467 RHBDF1Q96CC6 855 aa11.42□□□□□ -0.58
SHMT2-212ENST00000554467 ATG10Q9H0Y0 220 aa11.42□□□□□ -0.58
SHMT2-212ENST00000554467 HPS4Q9NQG7 708 aa11.42□□□□□ -0.58
SHMT2-212ENST00000554467 OPTCQ9UBM4 332 aa11.42□□□□□ -0.58
SHMT2-212ENST00000554467 FBXO10Q9UK96 956 aa11.42□□□□□ -0.58
SHMT2-212ENST00000554467 PTBP2Q9UKA9 531 aaKnown RBP11.42□□□□□ -0.58
SHMT2-212ENST00000554467 PDE10AQ9Y233 779 aa11.42□□□□□ -0.58
SHMT2-212ENST00000554467 SYNCRIPO60506 623 aaKnown RBP11.42□□□□□ -0.58
SHMT2-212ENST00000554467 TPST1O60507 370 aa11.42□□□□□ -0.58
SHMT2-212ENST00000554467 ZNF23P17027 643 aa11.42□□□□□ -0.58
SHMT2-212ENST00000554467 TRAF3Q13114 568 aa11.42□□□□□ -0.58
SHMT2-212ENST00000554467 DUSP6Q16828 381 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms