RNA–Protein interactions for RNA: ENST00000554264.5

VPS33B-203, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 4

Gene VPS33B, Length 389 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-203ENST00000554264 STX1BP61266 288 aa5.85□□□□□ -1.47
VPS33B-203ENST00000554264 IL13RA1P78552 427 aa5.85□□□□□ -1.47
VPS33B-203ENST00000554264 MPP1Q00013 466 aa5.85□□□□□ -1.47
VPS33B-203ENST00000554264 MYBPC1Q00872 1141 aa5.85□□□□□ -1.47
VPS33B-203ENST00000554264 GBE1Q04446 702 aa5.85□□□□□ -1.47
VPS33B-203ENST00000554264 CDH17Q12864 832 aa5.85□□□□□ -1.47
VPS33B-203ENST00000554264 EPS8Q12929 822 aa5.85□□□□□ -1.47
VPS33B-203ENST00000554264 GRIK2Q13002 908 aa5.85□□□□□ -1.47
VPS33B-203ENST00000554264 TAF5Q15542 800 aa5.85□□□□□ -1.47
VPS33B-203ENST00000554264 CDO1Q16878 200 aa5.85□□□□□ -1.47
VPS33B-203ENST00000554264 C15orf59Q2T9L4 293 aaPredicted RBP5.85□□□□□ -1.47
VPS33B-203ENST00000554264 ZBED5Q49AG3 693 aa5.85□□□□□ -1.47
VPS33B-203ENST00000554264 AASDHQ4L235 1098 aaPredicted RBP5.85□□□□□ -1.47
VPS33B-203ENST00000554264 PPM1LQ5SGD2 360 aa5.85□□□□□ -1.47
VPS33B-203ENST00000554264 UBXN11Q5T124 520 aa5.85□□□□□ -1.47
VPS33B-203ENST00000554264 CES4AQ5XG92 561 aa5.85□□□□□ -1.47
VPS33B-203ENST00000554264 EGFLAMQ63HQ2 1017 aa5.85□□□□□ -1.47
VPS33B-203ENST00000554264 JADE1Q6IE81 842 aa5.85□□□□□ -1.47
VPS33B-203ENST00000554264 FUT10Q6P4F1 479 aa5.85□□□□□ -1.47
VPS33B-203ENST00000554264 RTL10Q7L3V2 364 aa5.85□□□□□ -1.47
VPS33B-203ENST00000554264 GPR141Q7Z602 305 aa5.85□□□□□ -1.47
VPS33B-203ENST00000554264 GRASPQ7Z6J2 395 aaPredicted RBP5.85□□□□□ -1.47
VPS33B-203ENST00000554264 KCNMB4Q86W47 210 aa5.85□□□□□ -1.47
VPS33B-203ENST00000554264 KIF18BQ86Y91 864 aa5.85□□□□□ -1.47
VPS33B-203ENST00000554264 LRRC49Q8IUZ0 686 aa5.85□□□□□ -1.47
VPS33B-203ENST00000554264 KLHDC8BQ8IXV7 354 aa5.85□□□□□ -1.47
VPS33B-203ENST00000554264 CRYBG2Q8N1P7 616 aa5.85□□□□□ -1.47
VPS33B-203ENST00000554264 BBS5Q8N3I7 341 aa5.85□□□□□ -1.47
VPS33B-203ENST00000554264 ZNF781Q8N8C0 355 aa5.85□□□□□ -1.47
VPS33B-203ENST00000554264 MINDY2Q8NBR6 621 aa5.85□□□□□ -1.47
VPS33B-203ENST00000554264 BEST2Q8NFU1 509 aa5.85□□□□□ -1.47
VPS33B-203ENST00000554264 FNDC8Q8TC99 324 aa5.85□□□□□ -1.47
VPS33B-203ENST00000554264 CALML6Q8TD86 181 aa5.85□□□□□ -1.47
VPS33B-203ENST00000554264 RNF139Q8WU17 664 aa5.85□□□□□ -1.47
VPS33B-203ENST00000554264 CHTF18Q8WVB6 975 aa5.85□□□□□ -1.47
VPS33B-203ENST00000554264 GAB3Q8WWW8 586 aa5.85□□□□□ -1.47
VPS33B-203ENST00000554264 FGF13Q92913 245 aa5.85□□□□□ -1.47
VPS33B-203ENST00000554264 BORCS5Q969J3 196 aa5.85□□□□□ -1.47
VPS33B-203ENST00000554264 NMD3Q96D46 503 aaKnown RBP5.85□□□□□ -1.47
VPS33B-203ENST00000554264 HDAC11Q96DB2 347 aa5.85□□□□□ -1.47
VPS33B-203ENST00000554264 NRBF2Q96F24 287 aa5.85□□□□□ -1.47
VPS33B-203ENST00000554264 P2RY11Q96G91 374 aa5.85□□□□□ -1.47
VPS33B-203ENST00000554264 VPS39Q96JC1 886 aa5.85□□□□□ -1.47
VPS33B-203ENST00000554264 MAGED4Q96JG8 741 aa5.85□□□□□ -1.47
VPS33B-203ENST00000554264 SLC45A3Q96JT2 553 aa5.85□□□□□ -1.47
VPS33B-203ENST00000554264 CNBD2Q96M20 576 aa5.85□□□□□ -1.47
VPS33B-203ENST00000554264 GAD1Q99259 594 aa5.85□□□□□ -1.47
VPS33B-203ENST00000554264 ELF4Q99607 663 aaPredicted RBP5.85□□□□□ -1.47
VPS33B-203ENST00000554264 PRPF18Q99633 342 aaKnown RBP5.85□□□□□ -1.47
VPS33B-203ENST00000554264 MRPL57Q9BQC6 102 aaKnown RBP5.85□□□□□ -1.47
VPS33B-203ENST00000554264 C9orf16Q9BUW7 83 aa5.85□□□□□ -1.47
VPS33B-203ENST00000554264 KIFC1Q9BW19 673 aa5.85□□□□□ -1.47
VPS33B-203ENST00000554264 GBA3Q9H227 469 aa5.85□□□□□ -1.47
VPS33B-203ENST00000554264 MRPL46Q9H2W6 279 aaKnown RBP5.85□□□□□ -1.47
VPS33B-203ENST00000554264 C10orf88Q9H8K7 445 aa5.85□□□□□ -1.47
VPS33B-203ENST00000554264 FAIMQ9NVQ4 179 aa5.85□□□□□ -1.47
VPS33B-203ENST00000554264 SYBUQ9NX95 663 aa5.85□□□□□ -1.47
VPS33B-203ENST00000554264 GIN1Q9NXP7 522 aa5.85□□□□□ -1.47
VPS33B-203ENST00000554264 KLHL8Q9P2G9 620 aaPredicted RBP5.85□□□□□ -1.47
VPS33B-203ENST00000554264 PAIP2BQ9ULR5 123 aaKnown RBP5.85□□□□□ -1.47
VPS33B-203ENST00000554264 FZD10Q9ULW2 581 aa5.85□□□□□ -1.47
VPS33B-203ENST00000554264 ACOT9Q9Y305 439 aa5.85□□□□□ -1.47
VPS33B-203ENST00000554264 SH3GLB1Q9Y371 365 aa5.85□□□□□ -1.47
VPS33B-203ENST00000554264 CACNA1IQ9P0X4 2223 aa5.84□□□□□ -1.47
VPS33B-203ENST00000554264 LOC100653049A0A140TA62 436 aa5.84□□□□□ -1.47
VPS33B-203ENST00000554264 TCRBV3S1A0A5B6 114 aa5.84□□□□□ -1.47
VPS33B-203ENST00000554264 TRIM64A6NGJ6 449 aa5.84□□□□□ -1.47
VPS33B-203ENST00000554264 TTC36A6NLP5 189 aa5.84□□□□□ -1.47
VPS33B-203ENST00000554264 XPO1O14980 1071 aaKnown RBP5.84□□□□□ -1.47
VPS33B-203ENST00000554264 ZBTB14O43829 449 aa5.84□□□□□ -1.47
VPS33B-203ENST00000554264 UGT1A9O60656 530 aa5.84□□□□□ -1.47
VPS33B-203ENST00000554264 KRT34O76011 436 aa5.84□□□□□ -1.47
VPS33B-203ENST00000554264 SRP72O76094 671 aaKnown RBP5.84□□□□□ -1.47
VPS33B-203ENST00000554264 PGM3O95394 542 aa5.84□□□□□ -1.47
VPS33B-203ENST00000554264 NPPAP01160 153 aa5.84□□□□□ -1.47
VPS33B-203ENST00000554264 PRKCGP05129 697 aa5.84□□□□□ -1.47
VPS33B-203ENST00000554264 EDN1P05305 212 aa5.84□□□□□ -1.47
VPS33B-203ENST00000554264 GPIP06744 558 aa5.84□□□□□ -1.47
VPS33B-203ENST00000554264 CDK4P11802 303 aa5.84□□□□□ -1.47
VPS33B-203ENST00000554264 STMN1P16949 149 aa5.84□□□□□ -1.47
VPS33B-203ENST00000554264 ZNF26P17031 533 aaPredicted RBP5.84□□□□□ -1.47
VPS33B-203ENST00000554264 RPL17P18621 184 aaKnown RBP5.84□□□□□ -1.47
VPS33B-203ENST00000554264 TFEBP19484 476 aa5.84□□□□□ -1.47
VPS33B-203ENST00000554264 CD72P21854 359 aa5.84□□□□□ -1.47
VPS33B-203ENST00000554264 IL10P22301 178 aa5.84□□□□□ -1.47
VPS33B-203ENST00000554264 PAX3P23760 479 aa5.84□□□□□ -1.47
VPS33B-203ENST00000554264 CNR2P34972 360 aa5.84□□□□□ -1.47
VPS33B-203ENST00000554264 MLH1P40692 756 aa5.84□□□□□ -1.47
VPS33B-203ENST00000554264 MRPL19P49406 292 aaKnown RBP5.84□□□□□ -1.47
VPS33B-203ENST00000554264 SCNN1GP51170 649 aa5.84□□□□□ -1.47
VPS33B-203ENST00000554264 THOP1P52888 689 aa5.84□□□□□ -1.47
VPS33B-203ENST00000554264 SESN2P58004 480 aaPredicted RBP5.84□□□□□ -1.47
VPS33B-203ENST00000554264 RAB10P61026 200 aa5.84□□□□□ -1.47
VPS33B-203ENST00000554264 PSME3P61289 254 aa5.84□□□□□ -1.47
VPS33B-203ENST00000554264 MRPS22P82650 360 aaKnown RBP5.84□□□□□ -1.47
VPS33B-203ENST00000554264 SHC2P98077 582 aa5.84□□□□□ -1.47
VPS33B-203ENST00000554264 NSUN2Q08J23 767 aaKnown RBP eCLIP5.84□□□□□ -1.47
VPS33B-203ENST00000554264 ELAVL2Q12926 359 aaKnown RBP5.84□□□□□ -1.47
VPS33B-203ENST00000554264 MTAPQ13126 283 aa5.84□□□□□ -1.47
VPS33B-203ENST00000554264 TUBA3CQ13748 450 aa5.84□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms