RNA–Protein interactions for RNA: ENST00000553950.5

SHMT2-210, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-210ENST00000553950 KNL1Q8NG31 2342 aa14.13□□□□□ -0.15
SHMT2-210ENST00000553950 FAM221BA6H8Z2 402 aa14.13□□□□□ -0.15
SHMT2-210ENST00000553950 TARM1B6A8C7 271 aa14.13□□□□□ -0.15
SHMT2-210ENST00000553950 KLK8O60259 260 aa14.13□□□□□ -0.15
SHMT2-210ENST00000553950 ZNF883P0CG24 379 aa14.13□□□□□ -0.15
SHMT2-210ENST00000553950 CCND1P24385 295 aa14.13□□□□□ -0.15
SHMT2-210ENST00000553950 SERPINB5P36952 375 aa14.13□□□□□ -0.15
SHMT2-210ENST00000553950 PIK3CGP48736 1102 aa14.13□□□□□ -0.15
SHMT2-210ENST00000553950 DNAJB13P59910 316 aa14.13□□□□□ -0.15
SHMT2-210ENST00000553950 TCF15Q12870 199 aa14.13□□□□□ -0.15
SHMT2-210ENST00000553950 PCLAFQ15004 111 aa14.13□□□□□ -0.15
SHMT2-210ENST00000553950 RPE65Q16518 533 aa14.13□□□□□ -0.15
SHMT2-210ENST00000553950 LPAL2Q16609 132 aa14.13□□□□□ -0.15
SHMT2-210ENST00000553950 PLA2G2CQ5R387 149 aa14.13□□□□□ -0.15
SHMT2-210ENST00000553950 C16orf46Q6P387 395 aa14.13□□□□□ -0.15
SHMT2-210ENST00000553950 TAX1BP1Q86VP1 789 aa14.13□□□□□ -0.15
SHMT2-210ENST00000553950 HOMEZQ8IX15 550 aa14.13□□□□□ -0.15
SHMT2-210ENST00000553950 KIRREL3Q8IZU9 778 aa14.13□□□□□ -0.15
SHMT2-210ENST00000553950 FAM46DQ8NEK8 389 aa14.13□□□□□ -0.15
SHMT2-210ENST00000553950 MAPK15Q8TD08 544 aa14.13□□□□□ -0.15
SHMT2-210ENST00000553950 MGARPQ8TDB4 240 aa14.13□□□□□ -0.15
SHMT2-210ENST00000553950 ZDHHC1Q8WTX9 485 aa14.13□□□□□ -0.15
SHMT2-210ENST00000553950 UBTD2Q8WUN7 234 aa14.13□□□□□ -0.15
SHMT2-210ENST00000553950 ATOH1Q92858 354 aaPredicted RBP14.13□□□□□ -0.15
SHMT2-210ENST00000553950 SH3KBP1Q96B97 665 aa14.13□□□□□ -0.15
SHMT2-210ENST00000553950 FBXL8Q96CD0 374 aa14.13□□□□□ -0.15
SHMT2-210ENST00000553950 PAIP2Q9BPZ3 127 aaKnown RBP14.13□□□□□ -0.15
SHMT2-210ENST00000553950 UNKQ9C0B0 810 aaKnown RBP14.13□□□□□ -0.15
SHMT2-210ENST00000553950 ARRDC1-AS1Q9H2J1 176 aa14.13□□□□□ -0.15
SHMT2-210ENST00000553950 GAREM1Q9H706 876 aa14.13□□□□□ -0.15
SHMT2-210ENST00000553950 KIR3DX1Q9H7L2 352 aa14.13□□□□□ -0.15
SHMT2-210ENST00000553950 PRDM8Q9NQV8 689 aa14.13□□□□□ -0.15
SHMT2-210ENST00000553950 NLGN3Q9NZ94 848 aa14.13□□□□□ -0.15
SHMT2-210ENST00000553950 WWOXQ9NZC7 414 aa14.13□□□□□ -0.15
SHMT2-210ENST00000553950 LNPEPQ9UIQ6 1025 aa14.13□□□□□ -0.15
SHMT2-210ENST00000553950 ADAMTS6Q9UKP5 1117 aa14.13□□□□□ -0.15
SHMT2-210ENST00000553950 PDE10AQ9Y233 779 aa14.13□□□□□ -0.15
SHMT2-210ENST00000553950 STK38LQ9Y2H1 464 aa14.13□□□□□ -0.15
SHMT2-210ENST00000553950 HCN4Q9Y3Q4 1203 aa14.13□□□□□ -0.15
SHMT2-210ENST00000553950 PLEKHM1Q9Y4G2 1056 aa14.13□□□□□ -0.15
SHMT2-210ENST00000553950 CUL9Q8IWT3 2517 aa14.12□□□□□ -0.15
SHMT2-210ENST00000553950 A8MT66 165 aa14.12□□□□□ -0.15
SHMT2-210ENST00000553950 B4DGG1 531 aa14.12□□□□□ -0.15
SHMT2-210ENST00000553950 UBXN8O00124 270 aa14.12□□□□□ -0.15
SHMT2-210ENST00000553950 SCAMP1O15126 338 aa14.12□□□□□ -0.15
SHMT2-210ENST00000553950 VIPP01282 170 aa14.12□□□□□ -0.15
SHMT2-210ENST00000553950 BPGMP07738 259 aa14.12□□□□□ -0.15
SHMT2-210ENST00000553950 XRCC1P18887 633 aaPredicted RBP14.12□□□□□ -0.15
SHMT2-210ENST00000553950 GRK2P25098 689 aa14.12□□□□□ -0.15
SHMT2-210ENST00000553950 SHMT2P34897 504 aa14.12□□□□□ -0.15
SHMT2-210ENST00000553950 GMPRP36959 345 aa14.12□□□□□ -0.15
SHMT2-210ENST00000553950 NBL1P41271 181 aa14.12□□□□□ -0.15
SHMT2-210ENST00000553950 BDKRB1P46663 353 aa14.12□□□□□ -0.15
SHMT2-210ENST00000553950 ATP1A2P50993 1020 aa14.12□□□□□ -0.15
SHMT2-210ENST00000553950 BNC1Q01954 994 aa14.12□□□□□ -0.15
SHMT2-210ENST00000553950 BIRC2Q13490 618 aa14.12□□□□□ -0.15
SHMT2-210ENST00000553950 SETDB1Q15047 1291 aa14.12□□□□□ -0.15
SHMT2-210ENST00000553950 PHKG1Q16816 387 aa14.12□□□□□ -0.15
SHMT2-210ENST00000553950 HLA-BQ31612 363 aa14.12□□□□□ -0.15
SHMT2-210ENST00000553950 C6orf132Q5T0Z8 1188 aa14.12□□□□□ -0.15
SHMT2-210ENST00000553950 ATG16L1Q676U5 607 aa14.12□□□□□ -0.15
SHMT2-210ENST00000553950 IYDQ6PHW0 289 aa14.12□□□□□ -0.15
SHMT2-210ENST00000553950 NUDCD3Q8IVD9 361 aa14.12□□□□□ -0.15
SHMT2-210ENST00000553950 SFRP1Q8N474 314 aa14.12□□□□□ -0.15
SHMT2-210ENST00000553950 SPDYE1Q8NFV5 336 aaPredicted RBP14.12□□□□□ -0.15
SHMT2-210ENST00000553950 OR9A1PQ8NGU1 263 aa14.12□□□□□ -0.15
SHMT2-210ENST00000553950 CCL4L1Q8NHW4 92 aa14.12□□□□□ -0.15
SHMT2-210ENST00000553950 FERD3LQ96RJ6 166 aa14.12□□□□□ -0.15
SHMT2-210ENST00000553950 INSM2Q96T92 566 aaPredicted RBP14.12□□□□□ -0.15
SHMT2-210ENST00000553950 HGH1Q9BTY7 390 aa14.12□□□□□ -0.15
SHMT2-210ENST00000553950 LDHAL6BQ9BYZ2 381 aaPredicted RBP14.12□□□□□ -0.15
SHMT2-210ENST00000553950 UTP6Q9NYH9 597 aaKnown RBP14.12□□□□□ -0.15
SHMT2-210ENST00000553950 OGFRQ9NZT2 677 aa14.12□□□□□ -0.15
SHMT2-210ENST00000553950 WDR37Q9Y2I8 494 aa14.12□□□□□ -0.15
SHMT2-210ENST00000553950 COL5A1P20908 1838 aaPredicted RBP14.11□□□□□ -0.15
SHMT2-210ENST00000553950 G3V2L1 256 aa14.11□□□□□ -0.15
SHMT2-210ENST00000553950 ZW10O43264 779 aa14.11□□□□□ -0.15
SHMT2-210ENST00000553950 PCDHGA12O60330 932 aa14.11□□□□□ -0.15
SHMT2-210ENST00000553950 TRIM13O60858 407 aa14.11□□□□□ -0.15
SHMT2-210ENST00000553950 ENGP17813 658 aa14.11□□□□□ -0.15
SHMT2-210ENST00000553950 FASLGP48023 281 aa14.11□□□□□ -0.15
SHMT2-210ENST00000553950 HERVK_113P63132 956 aa14.11□□□□□ -0.15
SHMT2-210ENST00000553950 C1orf61Q13536 156 aa14.11□□□□□ -0.15
SHMT2-210ENST00000553950 CLCA4Q14CN2 919 aa14.11□□□□□ -0.15
SHMT2-210ENST00000553950 SUZ12Q15022 739 aaKnown RBP14.11□□□□□ -0.15
SHMT2-210ENST00000553950 PDK4Q16654 411 aa14.11□□□□□ -0.15
SHMT2-210ENST00000553950 EEF1AKMT2Q5JPI9 291 aaKnown RBP14.11□□□□□ -0.15
SHMT2-210ENST00000553950 CFAP157Q5JU67 520 aa14.11□□□□□ -0.15
SHMT2-210ENST00000553950 ANKS6Q68DC2 871 aa14.11□□□□□ -0.15
SHMT2-210ENST00000553950 ZCCHC8Q6NZY4 707 aaKnown RBP14.11□□□□□ -0.15
SHMT2-210ENST00000553950 LRRC70Q7Z2Q7 622 aa14.11□□□□□ -0.15
SHMT2-210ENST00000553950 ARL10Q8N8L6 244 aa14.11□□□□□ -0.15
SHMT2-210ENST00000553950 PTGR2Q8N8N7 351 aaPredicted RBP14.11□□□□□ -0.15
SHMT2-210ENST00000553950 SUMF1Q8NBK3 374 aa14.11□□□□□ -0.15
SHMT2-210ENST00000553950 OR6C4Q8NGE1 309 aa14.11□□□□□ -0.15
SHMT2-210ENST00000553950 OR5AR1Q8NGP9 310 aa14.11□□□□□ -0.15
SHMT2-210ENST00000553950 L3HYPDHQ96EM0 354 aa14.11□□□□□ -0.15
SHMT2-210ENST00000553950 TRMOQ9BU70 441 aa14.11□□□□□ -0.15
SHMT2-210ENST00000553950 ERVK-6Q9BXR3 956 aa14.11□□□□□ -0.15
SHMT2-210ENST00000553950 UCK1Q9HA47 277 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms