RNA–Protein interactions for RNA: ENST00000553455.1

SYNE2-210, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 2 BASIC

Gene SYNE2, Length 674 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-210ENST00000553455 PCDHGB1Q9Y5G3 927 aa4.85□□□□□ -1.63
SYNE2-210ENST00000553455 PCDH11YQ9BZA8 1340 aa4.85□□□□□ -1.63
SYNE2-210ENST00000553455 A0A1W2PPK0 400 aa4.84□□□□□ -1.63
SYNE2-210ENST00000553455 A0A1W2PS18 150 aa4.84□□□□□ -1.63
SYNE2-210ENST00000553455 ARHGEF37A1IGU5 675 aa4.84□□□□□ -1.63
SYNE2-210ENST00000553455 ENO4A6NNW6 628 aa4.84□□□□□ -1.63
SYNE2-210ENST00000553455 E9PI62 339 aa4.84□□□□□ -1.63
SYNE2-210ENST00000553455 GAPDHSO14556 408 aaPredicted RBP4.84□□□□□ -1.63
SYNE2-210ENST00000553455 AP5Z1O43299 807 aa4.84□□□□□ -1.63
SYNE2-210ENST00000553455 CSN3P07498 182 aa4.84□□□□□ -1.63
SYNE2-210ENST00000553455 ZFYP08048 801 aaPredicted RBP4.84□□□□□ -1.63
SYNE2-210ENST00000553455 SNRNP70P08621 437 aaKnown RBP4.84□□□□□ -1.63
SYNE2-210ENST00000553455 SMIM18P0DKX4 95 aa4.84□□□□□ -1.63
SYNE2-210ENST00000553455 TCF4P15884 667 aa4.84□□□□□ -1.63
SYNE2-210ENST00000553455 PDGFRAP16234 1089 aa4.84□□□□□ -1.63
SYNE2-210ENST00000553455 ADRA2CP18825 462 aa4.84□□□□□ -1.63
SYNE2-210ENST00000553455 NR1D1P20393 614 aa4.84□□□□□ -1.63
SYNE2-210ENST00000553455 CTNNA1P35221 906 aaKnown RBP4.84□□□□□ -1.63
SYNE2-210ENST00000553455 IL15P40933 162 aaPredicted RBP4.84□□□□□ -1.63
SYNE2-210ENST00000553455 TNNT3P45378 269 aaPredicted RBP4.84□□□□□ -1.63
SYNE2-210ENST00000553455 BMXP51813 675 aa4.84□□□□□ -1.63
SYNE2-210ENST00000553455 CAPZA1P52907 286 aa4.84□□□□□ -1.63
SYNE2-210ENST00000553455 UBASH3AP57075 661 aa4.84□□□□□ -1.63
SYNE2-210ENST00000553455 CX3CL1P78423 397 aa4.84□□□□□ -1.63
SYNE2-210ENST00000553455 DMPKQ09013 629 aa4.84□□□□□ -1.63
SYNE2-210ENST00000553455 GAGE5Q13069 117 aa4.84□□□□□ -1.63
SYNE2-210ENST00000553455 GAGE6Q13070 117 aa4.84□□□□□ -1.63
SYNE2-210ENST00000553455 FHL1Q13642 323 aa4.84□□□□□ -1.63
SYNE2-210ENST00000553455 IZUMO4Q1ZYL8 232 aa4.84□□□□□ -1.63
SYNE2-210ENST00000553455 ZNF585BQ52M93 769 aa4.84□□□□□ -1.63
SYNE2-210ENST00000553455 ZRANB3Q5FWF4 1079 aa4.84□□□□□ -1.63
SYNE2-210ENST00000553455 CAPRIN2Q6IMN6 1127 aaKnown RBP4.84□□□□□ -1.63
SYNE2-210ENST00000553455 ZNF852Q6ZMS4 543 aa4.84□□□□□ -1.63
SYNE2-210ENST00000553455 SPATA19Q7Z5L4 167 aa4.84□□□□□ -1.63
SYNE2-210ENST00000553455 FAM219AQ8IW50 185 aa4.84□□□□□ -1.63
SYNE2-210ENST00000553455 ANKRD13CQ8N6S4 541 aa4.84□□□□□ -1.63
SYNE2-210ENST00000553455 NPEPL1Q8NDH3 523 aa4.84□□□□□ -1.63
SYNE2-210ENST00000553455 OCC1Q8TAD7 63 aa4.84□□□□□ -1.63
SYNE2-210ENST00000553455 OLIG1Q8TAK6 271 aa4.84□□□□□ -1.63
SYNE2-210ENST00000553455 CORO2AQ92828 525 aa4.84□□□□□ -1.63
SYNE2-210ENST00000553455 SGK494Q96LW2 274 aa4.84□□□□□ -1.63
SYNE2-210ENST00000553455 INTS14Q96SY0 518 aa4.84□□□□□ -1.63
SYNE2-210ENST00000553455 PKP4Q99569 1192 aa4.84□□□□□ -1.63
SYNE2-210ENST00000553455 MEIS3Q99687 375 aa4.84□□□□□ -1.63
SYNE2-210ENST00000553455 ABCF3Q9NUQ8 709 aa4.84□□□□□ -1.63
SYNE2-210ENST00000553455 SLC38A7Q9NVC3 462 aa4.84□□□□□ -1.63
SYNE2-210ENST00000553455 POLLQ9UGP5 575 aa4.84□□□□□ -1.63
SYNE2-210ENST00000553455 A0A1W2PRB8 838 aa4.83□□□□□ -1.64
SYNE2-210ENST00000553455 FAM170AA1A519 330 aa4.83□□□□□ -1.64
SYNE2-210ENST00000553455 SMTNL1A8MU46 457 aa4.83□□□□□ -1.64
SYNE2-210ENST00000553455 GBAP04062 536 aa4.83□□□□□ -1.64
SYNE2-210ENST00000553455 HAPLN1P10915 354 aaPredicted RBP4.83□□□□□ -1.64
SYNE2-210ENST00000553455 SLC6A6P31641 620 aa4.83□□□□□ -1.64
SYNE2-210ENST00000553455 PTGER4P35408 488 aa4.83□□□□□ -1.64
SYNE2-210ENST00000553455 CRKLP46109 303 aaKnown RBP4.83□□□□□ -1.64
SYNE2-210ENST00000553455 CA9Q16790 459 aa4.83□□□□□ -1.64
SYNE2-210ENST00000553455 MFSD6Q6ZSS7 791 aa4.83□□□□□ -1.64
SYNE2-210ENST00000553455 FOXL2NBQ6ZUU3 175 aa4.83□□□□□ -1.64
SYNE2-210ENST00000553455 ANO5Q75V66 913 aa4.83□□□□□ -1.64
SYNE2-210ENST00000553455 ARHGAP22Q7Z5H3 698 aa4.83□□□□□ -1.64
SYNE2-210ENST00000553455 CFAP206Q8IYR0 622 aa4.83□□□□□ -1.64
SYNE2-210ENST00000553455 BMPERQ8N8U9 685 aa4.83□□□□□ -1.64
SYNE2-210ENST00000553455 PPFIBP2Q8ND30 876 aa4.83□□□□□ -1.64
SYNE2-210ENST00000553455 ZNF473Q8WTR7 871 aaKnown RBP4.83□□□□□ -1.64
SYNE2-210ENST00000553455 ATP6V1E2Q96A05 226 aa4.83□□□□□ -1.64
SYNE2-210ENST00000553455 SPATA33Q96N06 139 aa4.83□□□□□ -1.64
SYNE2-210ENST00000553455 FERMT1Q9BQL6 677 aa4.83□□□□□ -1.64
SYNE2-210ENST00000553455 DESI2Q9BSY9 194 aa4.83□□□□□ -1.64
SYNE2-210ENST00000553455 TCF7L2Q9NQB0 619 aa4.83□□□□□ -1.64
SYNE2-210ENST00000553455 OLFML3Q9NRN5 406 aa4.83□□□□□ -1.64
SYNE2-210ENST00000553455 PTTG2Q9NZH5 202 aa4.83□□□□□ -1.64
SYNE2-210ENST00000553455 ZFP37Q9Y6Q3 630 aaPredicted RBP4.83□□□□□ -1.64
SYNE2-210ENST00000553455 IGLV5-45A0A087WSX0 123 aa4.82□□□□□ -1.64
SYNE2-210ENST00000553455 A0A1B0GUV1 79 aa4.82□□□□□ -1.64
SYNE2-210ENST00000553455 HTR3EA5X5Y0 456 aa4.82□□□□□ -1.64
SYNE2-210ENST00000553455 FAM86B1E9PN63 330 aa4.82□□□□□ -1.64
SYNE2-210ENST00000553455 WDR46O15213 610 aaKnown RBP4.82□□□□□ -1.64
SYNE2-210ENST00000553455 RNASEH1O60930 286 aaKnown RBP4.82□□□□□ -1.64
SYNE2-210ENST00000553455 TGDSO95455 350 aa4.82□□□□□ -1.64
SYNE2-210ENST00000553455 FAM86B2P0C5J1 330 aa4.82□□□□□ -1.64
SYNE2-210ENST00000553455 FAM58BPP0C7Q3 252 aa4.82□□□□□ -1.64
SYNE2-210ENST00000553455 FGF3P11487 239 aaPredicted RBP4.82□□□□□ -1.64
SYNE2-210ENST00000553455 TCEA1P23193 301 aaKnown RBP4.82□□□□□ -1.64
SYNE2-210ENST00000553455 DGKAP23743 735 aa4.82□□□□□ -1.64
SYNE2-210ENST00000553455 KRT2P35908 639 aa4.82□□□□□ -1.64
SYNE2-210ENST00000553455 NAGLUP54802 743 aa4.82□□□□□ -1.64
SYNE2-210ENST00000553455 RPS18P62269 152 aaKnown RBP4.82□□□□□ -1.64
SYNE2-210ENST00000553455 CUL3Q13618 768 aa4.82□□□□□ -1.64
SYNE2-210ENST00000553455 ITGA7Q13683 1181 aa4.82□□□□□ -1.64
SYNE2-210ENST00000553455 ASPRV1Q53RT3 343 aa4.82□□□□□ -1.64
SYNE2-210ENST00000553455 TCTE1Q5JU00 501 aa4.82□□□□□ -1.64
SYNE2-210ENST00000553455 SPDYCQ5MJ68 293 aa4.82□□□□□ -1.64
SYNE2-210ENST00000553455 ELFN2Q5R3F8 820 aa4.82□□□□□ -1.64
SYNE2-210ENST00000553455 ZNF611Q8N823 705 aa4.82□□□□□ -1.64
SYNE2-210ENST00000553455 KCNE4Q8WWG9 221 aa4.82□□□□□ -1.64
SYNE2-210ENST00000553455 IRGQQ8WZA9 623 aa4.82□□□□□ -1.64
SYNE2-210ENST00000553455 ERO1AQ96HE7 468 aa4.82□□□□□ -1.64
SYNE2-210ENST00000553455 FNBP1Q96RU3 617 aa4.82□□□□□ -1.64
SYNE2-210ENST00000553455 RAD9AQ99638 391 aa4.82□□□□□ -1.64
SYNE2-210ENST00000553455 GPATCH1Q9BRR8 931 aaKnown RBP4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms