RNA–Protein interactions for RNA: ENST00000553340.1

SYNE3-202, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

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Gene SYNE3, Length 2,615 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-202ENST00000553340 SPON2Q9BUD6 331 aa17.19■□□□□ 0.34
SYNE3-202ENST00000553340 MAGEH1Q9H213 219 aa17.19■□□□□ 0.34
SYNE3-202ENST00000553340 ZFP14Q9HCL3 533 aa17.19■□□□□ 0.34
SYNE3-202ENST00000553340 SCUBE2Q9NQ36 999 aa17.19■□□□□ 0.34
SYNE3-202ENST00000553340 ZNF232Q9UNY5 417 aa17.19■□□□□ 0.34
SYNE3-202ENST00000553340 PMF1-BGLAPU3KQ54 211 aa17.19■□□□□ 0.34
SYNE3-202ENST00000553340 F5H5T6 163 aa17.19■□□□□ 0.34
SYNE3-202ENST00000553340 SLC28A1O00337 649 aa17.19■□□□□ 0.34
SYNE3-202ENST00000553340 MITFO75030 526 aaPredicted RBP17.19■□□□□ 0.34
SYNE3-202ENST00000553340 PSMB9P28065 219 aa17.19■□□□□ 0.34
SYNE3-202ENST00000553340 GNPDA1P46926 289 aa17.19■□□□□ 0.34
SYNE3-202ENST00000553340 CXCR4P61073 352 aa17.19■□□□□ 0.34
SYNE3-202ENST00000553340 GTDC1Q4AE62 458 aa17.19■□□□□ 0.34
SYNE3-202ENST00000553340 LGI2Q8N0V4 545 aa17.19■□□□□ 0.34
SYNE3-202ENST00000553340 EFHBQ8N7U6 833 aa17.19■□□□□ 0.34
SYNE3-202ENST00000553340 ERLEC1Q96DZ1 483 aa17.19■□□□□ 0.34
SYNE3-202ENST00000553340 ITCHQ96J02 903 aa17.19■□□□□ 0.34
SYNE3-202ENST00000553340 KLHL25Q9H0H3 589 aa17.19■□□□□ 0.34
SYNE3-202ENST00000553340 CLMPQ9H6B4 373 aa17.19■□□□□ 0.34
SYNE3-202ENST00000553340 PCDH12Q9NPG4 1184 aa17.19■□□□□ 0.34
SYNE3-202ENST00000553340 FBXO10Q9UK96 956 aa17.19■□□□□ 0.34
SYNE3-202ENST00000553340 DHRS7Q9Y394 339 aa17.19■□□□□ 0.34
SYNE3-202ENST00000553340 TSC22D4Q9Y3Q8 395 aa17.19■□□□□ 0.34
SYNE3-202ENST00000553340 ANGPTL3Q9Y5C1 460 aa17.19■□□□□ 0.34
SYNE3-202ENST00000553340 PCDHB14Q9Y5E9 798 aa17.19■□□□□ 0.34
SYNE3-202ENST00000553340 HSPE1-MOB4S4R3N1 261 aa17.19■□□□□ 0.34
SYNE3-202ENST00000553340 FFAR3O14843 346 aa17.18■□□□□ 0.34
SYNE3-202ENST00000553340 GPR42O15529 346 aa17.18■□□□□ 0.34
SYNE3-202ENST00000553340 NTRK1P04629 796 aa17.18■□□□□ 0.34
SYNE3-202ENST00000553340 CD6P30203 668 aa17.18■□□□□ 0.34
SYNE3-202ENST00000553340 HSPA7P48741 367 aa17.18■□□□□ 0.34
SYNE3-202ENST00000553340 DGCR6Q14129 220 aa17.18■□□□□ 0.34
SYNE3-202ENST00000553340 SIM2Q14190 667 aaPredicted RBP17.18■□□□□ 0.34
SYNE3-202ENST00000553340 CLCA4Q14CN2 919 aa17.18■□□□□ 0.34
SYNE3-202ENST00000553340 INAVAQ3KP66 663 aa17.18■□□□□ 0.34
SYNE3-202ENST00000553340 TMEM236Q5W0B7 351 aa17.18■□□□□ 0.34
SYNE3-202ENST00000553340 CPZQ66K79 652 aa17.18■□□□□ 0.34
SYNE3-202ENST00000553340 GDF6Q6KF10 455 aaPredicted RBP17.18■□□□□ 0.34
SYNE3-202ENST00000553340 USP50Q70EL3 339 aaPredicted RBP17.18■□□□□ 0.34
SYNE3-202ENST00000553340 RIBC2Q9H4K1 309 aa17.18■□□□□ 0.34
SYNE3-202ENST00000553340 NSUN3Q9H649 340 aaKnown RBP17.18■□□□□ 0.34
SYNE3-202ENST00000553340 RMND5AQ9H871 391 aa17.18■□□□□ 0.34
SYNE3-202ENST00000553340 TLR8Q9NR97 1041 aaKnown RBP17.18■□□□□ 0.34
SYNE3-202ENST00000553340 SACM1LQ9NTJ5 587 aa17.18■□□□□ 0.34
SYNE3-202ENST00000553340 C1orf109Q9NX04 203 aa17.18■□□□□ 0.34
SYNE3-202ENST00000553340 KIAA1522Q9P206 1035 aaPredicted RBP17.18■□□□□ 0.34
SYNE3-202ENST00000553340 TRBV5-3A0A0A0MS03 114 aa17.18■□□□□ 0.34
SYNE3-202ENST00000553340 GOLGA8CPA6NN73 597 aa17.18■□□□□ 0.34
SYNE3-202ENST00000553340 SEC22BO75396 215 aa17.18■□□□□ 0.34
SYNE3-202ENST00000553340 ARHGDIAP52565 204 aa17.18■□□□□ 0.34
SYNE3-202ENST00000553340 HMGCS1Q01581 520 aa17.18■□□□□ 0.34
SYNE3-202ENST00000553340 RING1Q06587 406 aa17.18■□□□□ 0.34
SYNE3-202ENST00000553340 BCL2A1Q16548 175 aa17.18■□□□□ 0.34
SYNE3-202ENST00000553340 CYP4Z1Q86W10 505 aa17.18■□□□□ 0.34
SYNE3-202ENST00000553340 CHPFQ8IZ52 775 aa17.18■□□□□ 0.34
SYNE3-202ENST00000553340 STK40Q8N2I9 435 aa17.18■□□□□ 0.34
SYNE3-202ENST00000553340 SVOPQ8N4V2 548 aa17.18■□□□□ 0.34
SYNE3-202ENST00000553340 KRTCAP2Q8N6L1 136 aa17.18■□□□□ 0.34
SYNE3-202ENST00000553340 DNAJB8Q8NHS0 232 aa17.18■□□□□ 0.34
SYNE3-202ENST00000553340 CORO1BQ9BR76 489 aa17.18■□□□□ 0.34
SYNE3-202ENST00000553340 ARVCFO00192 962 aa17.17■□□□□ 0.34
SYNE3-202ENST00000553340 ULK1O75385 1050 aa17.17■□□□□ 0.34
SYNE3-202ENST00000553340 ERN1O75460 977 aaKnown RBP17.17■□□□□ 0.34
SYNE3-202ENST00000553340 OAZ2O95190 189 aa17.17■□□□□ 0.34
SYNE3-202ENST00000553340 SEC24AO95486 1093 aa17.17■□□□□ 0.34
SYNE3-202ENST00000553340 GUCA1CO95843 209 aa17.17■□□□□ 0.34
SYNE3-202ENST00000553340 CR2P20023 1033 aa17.17■□□□□ 0.34
SYNE3-202ENST00000553340 PIK3CGP48736 1102 aa17.17■□□□□ 0.34
SYNE3-202ENST00000553340 NCS1P62166 190 aa17.17■□□□□ 0.34
SYNE3-202ENST00000553340 IL1RL1Q01638 556 aa17.17■□□□□ 0.34
SYNE3-202ENST00000553340 KEAP1Q14145 624 aa17.17■□□□□ 0.34
SYNE3-202ENST00000553340 CCL14Q16627 93 aa17.17■□□□□ 0.34
SYNE3-202ENST00000553340 MORN1Q5T089 497 aa17.17■□□□□ 0.34
SYNE3-202ENST00000553340 C1QTNF12Q5T7M4 302 aa17.17■□□□□ 0.34
SYNE3-202ENST00000553340 CAPN13Q6MZZ7 669 aaPredicted RBP17.17■□□□□ 0.34
SYNE3-202ENST00000553340 CES5AQ6NT32 575 aa17.17■□□□□ 0.34
SYNE3-202ENST00000553340 CALHM3Q86XJ0 350 aa17.17■□□□□ 0.34
SYNE3-202ENST00000553340 ZDHHC21Q8IVQ6 265 aa17.17■□□□□ 0.34
SYNE3-202ENST00000553340 TTC16Q8NEE8 873 aa17.17■□□□□ 0.34
SYNE3-202ENST00000553340 ADAM2Q99965 735 aa17.17■□□□□ 0.34
SYNE3-202ENST00000553340 ADGRE3Q9BY15 652 aa17.17■□□□□ 0.34
SYNE3-202ENST00000553340 IL37Q9NZH6 218 aa17.17■□□□□ 0.34
SYNE3-202ENST00000553340 ANKMY1Q9P2S6 941 aa17.17■□□□□ 0.34
SYNE3-202ENST00000553340 ERVW-1Q9UQF0 538 aa17.17■□□□□ 0.34
SYNE3-202ENST00000553340 PCDHB5Q9Y5E4 795 aa17.17■□□□□ 0.34
SYNE3-202ENST00000553340 PCDHGC4Q9Y5F7 938 aa17.17■□□□□ 0.34
SYNE3-202ENST00000553340 ANKRD66B4E2M5 251 aa17.17■□□□□ 0.34
SYNE3-202ENST00000553340 GSTT2P0CG29 244 aa17.17■□□□□ 0.34
SYNE3-202ENST00000553340 GSTT2BP0CG30 244 aa17.17■□□□□ 0.34
SYNE3-202ENST00000553340 GGT5P36269 586 aa17.17■□□□□ 0.34
SYNE3-202ENST00000553340 MVKQ03426 396 aa17.17■□□□□ 0.34
SYNE3-202ENST00000553340 MGAT3Q09327 533 aa17.17■□□□□ 0.34
SYNE3-202ENST00000553340 TAF10Q12962 218 aa17.17■□□□□ 0.34
SYNE3-202ENST00000553340 SLC22A16Q86VW1 577 aa17.17■□□□□ 0.34
SYNE3-202ENST00000553340 APOL4Q9BPW4 351 aa17.17■□□□□ 0.34
SYNE3-202ENST00000553340 ALOXE3Q9BYJ1 711 aa17.17■□□□□ 0.34
SYNE3-202ENST00000553340 GABARAPL1Q9H0R8 117 aa17.17■□□□□ 0.34
SYNE3-202ENST00000553340 P2RY12Q9H244 342 aa17.17■□□□□ 0.34
SYNE3-202ENST00000553340 LRTM1Q9HBL6 345 aa17.17■□□□□ 0.34
SYNE3-202ENST00000553340 KLQ9UEF7 1012 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms