RNA–Protein interactions for RNA: ENST00000552960.5

HDAC7-230, Transcript of histone deacetylase 7, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene HDAC7, Length 3,216 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-230ENST00000552960 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP12.13□□□□□ -0.473e-6■■■■□ 19.8
HDAC7-230ENST00000552960 TNFRSF10BO14763 440 aa12.13□□□□□ -0.47
HDAC7-230ENST00000552960 PFDN6O15212 129 aa12.13□□□□□ -0.47
HDAC7-230ENST00000552960 GGT1P19440 569 aa12.13□□□□□ -0.47
HDAC7-230ENST00000552960 PAX3P23760 479 aa12.13□□□□□ -0.47
HDAC7-230ENST00000552960 CLK1P49759 484 aaKnown RBP12.13□□□□□ -0.47
HDAC7-230ENST00000552960 MLLT6P55198 1093 aaPredicted RBP12.13□□□□□ -0.47
HDAC7-230ENST00000552960 ERVPABLB-1P60509 514 aa12.13□□□□□ -0.47
HDAC7-230ENST00000552960 HMGCS1Q01581 520 aa12.13□□□□□ -0.47
HDAC7-230ENST00000552960 KCNC4Q03721 635 aa12.13□□□□□ -0.47
HDAC7-230ENST00000552960 PTPRRQ15256 657 aa12.13□□□□□ -0.47
HDAC7-230ENST00000552960 TTC30BQ8N4P2 665 aa12.13□□□□□ -0.47
HDAC7-230ENST00000552960 S100ZQ8WXG8 99 aa12.13□□□□□ -0.47
HDAC7-230ENST00000552960 AKIP1Q9NQ31 210 aa12.13□□□□□ -0.47
HDAC7-230ENST00000552960 WDR70Q9NW82 654 aa12.13□□□□□ -0.47
HDAC7-230ENST00000552960 TMEM161AQ9NX61 479 aa12.13□□□□□ -0.47
HDAC7-230ENST00000552960 TRMT6Q9UJA5 497 aaKnown RBP12.13□□□□□ -0.47
HDAC7-230ENST00000552960 FRMPD3Q5JV73 1810 aa12.12□□□□□ -0.47
HDAC7-230ENST00000552960 WISP3O95389 354 aaPredicted RBP12.12□□□□□ -0.47
HDAC7-230ENST00000552960 MLYCDO95822 493 aa12.12□□□□□ -0.47
HDAC7-230ENST00000552960 ATXN1LP0C7T5 689 aaKnown RBP12.12□□□□□ -0.47
HDAC7-230ENST00000552960 NR4A2P43354 598 aa12.12□□□□□ -0.47
HDAC7-230ENST00000552960 ZRANB3Q5FWF4 1079 aa12.12□□□□□ -0.47
HDAC7-230ENST00000552960 PLEKHG7Q6ZR37 379 aa12.12□□□□□ -0.47
HDAC7-230ENST00000552960 TAS2R42Q7RTR8 314 aa12.12□□□□□ -0.47
HDAC7-230ENST00000552960 ANKRD46Q86W74 232 aa12.12□□□□□ -0.47
HDAC7-230ENST00000552960 KLHDC8BQ8IXV7 354 aa12.12□□□□□ -0.47
HDAC7-230ENST00000552960 THEM5Q8N1Q8 247 aa12.12□□□□□ -0.47
HDAC7-230ENST00000552960 NSMCE3Q96MG7 304 aa12.12□□□□□ -0.47
HDAC7-230ENST00000552960 TPK1Q9H3S4 243 aa12.12□□□□□ -0.47
HDAC7-230ENST00000552960 ZIM2Q9NZV7 527 aa12.12□□□□□ -0.47
HDAC7-230ENST00000552960 PCDHB8Q9UN66 801 aa12.12□□□□□ -0.47
HDAC7-230ENST00000552960 VWA8A3KMH1 1905 aa12.12□□□□□ -0.47
HDAC7-230ENST00000552960 FAM92AA1XBS5 289 aa12.12□□□□□ -0.47
HDAC7-230ENST00000552960 CXCR6O00574 342 aa12.12□□□□□ -0.47
HDAC7-230ENST00000552960 PRMT5O14744 637 aaPredicted RBP12.12□□□□□ -0.47
HDAC7-230ENST00000552960 MUSKO15146 869 aa12.12□□□□□ -0.47
HDAC7-230ENST00000552960 VNN2O95498 520 aa12.12□□□□□ -0.47
HDAC7-230ENST00000552960 PEX11BO96011 259 aa12.12□□□□□ -0.47
HDAC7-230ENST00000552960 SERPINA1P01009 418 aa12.12□□□□□ -0.47
HDAC7-230ENST00000552960 OR1E1P30953 314 aa12.12□□□□□ -0.47
HDAC7-230ENST00000552960 ISL1P61371 349 aa12.12□□□□□ -0.47
HDAC7-230ENST00000552960 CDK5R2Q13319 367 aa12.12□□□□□ -0.47
HDAC7-230ENST00000552960 CTXN3Q4LDR2 81 aa12.12□□□□□ -0.47
HDAC7-230ENST00000552960 COLEC12Q5KU26 742 aa12.12□□□□□ -0.47
HDAC7-230ENST00000552960 LAIR2Q6ISS4 152 aa12.12□□□□□ -0.47
HDAC7-230ENST00000552960 NECAB2Q7Z6G3 386 aa12.12□□□□□ -0.47
HDAC7-230ENST00000552960 GALNT10Q86SR1 603 aa12.12□□□□□ -0.47
HDAC7-230ENST00000552960 HEATR4Q86WZ0 1026 aa12.12□□□□□ -0.47
HDAC7-230ENST00000552960 CFAP52Q8N1V2 620 aa12.12□□□□□ -0.47
HDAC7-230ENST00000552960 FAR1Q8WVX9 515 aa12.12□□□□□ -0.47
HDAC7-230ENST00000552960 ZBTB18Q99592 522 aa12.12□□□□□ -0.47
HDAC7-230ENST00000552960 AMBNQ9NP70 447 aa12.12□□□□□ -0.47
HDAC7-230ENST00000552960 TMEM98Q9Y2Y6 226 aa12.12□□□□□ -0.47
HDAC7-230ENST00000552960 ELOVL7A1L3X0 281 aa12.11□□□□□ -0.47
HDAC7-230ENST00000552960 RAMP2O60895 175 aa12.11□□□□□ -0.47
HDAC7-230ENST00000552960 GNRH1P01148 92 aa12.11□□□□□ -0.47
HDAC7-230ENST00000552960 RPS17P08708 135 aaKnown RBP12.11□□□□□ -0.47
HDAC7-230ENST00000552960 MYCLP1P12525 358 aaPredicted RBP12.11□□□□□ -0.47
HDAC7-230ENST00000552960 SPOUT1Q5T280 376 aaKnown RBP12.11□□□□□ -0.47
HDAC7-230ENST00000552960 ADHFE1Q8IWW8 467 aa12.11□□□□□ -0.47
HDAC7-230ENST00000552960 SYTL1Q8IYJ3 562 aa12.11□□□□□ -0.47
HDAC7-230ENST00000552960 KRTCAP2Q8N6L1 136 aa12.11□□□□□ -0.47
HDAC7-230ENST00000552960 PAF1Q8N7H5 531 aa12.11□□□□□ -0.47
HDAC7-230ENST00000552960 ARRDC2Q8TBH0 407 aa12.11□□□□□ -0.47
HDAC7-230ENST00000552960 TSPEARQ8WU66 669 aa12.11□□□□□ -0.47
HDAC7-230ENST00000552960 UBE2FQ969M7 185 aa12.11□□□□□ -0.47
HDAC7-230ENST00000552960 ZHX1-C8orf76Q96EF9 292 aa12.11□□□□□ -0.47
HDAC7-230ENST00000552960 BRINP2Q9C0B6 783 aa12.11□□□□□ -0.47
HDAC7-230ENST00000552960 ZYG11BQ9C0D3 744 aa12.11□□□□□ -0.47
HDAC7-230ENST00000552960 SMPD4Q9NXE4 827 aa12.11□□□□□ -0.47
HDAC7-230ENST00000552960 GOLGA8CPA6NN73 597 aa12.11□□□□□ -0.47
HDAC7-230ENST00000552960 RPLP2P05387 115 aaKnown RBP12.11□□□□□ -0.47
HDAC7-230ENST00000552960 DBTP11182 482 aaKnown RBP12.11□□□□□ -0.47
HDAC7-230ENST00000552960 DCTP40126 519 aa12.11□□□□□ -0.47
HDAC7-230ENST00000552960 ST13P50502 369 aaKnown RBP12.11□□□□□ -0.47
HDAC7-230ENST00000552960 HK3P52790 923 aa12.11□□□□□ -0.47
HDAC7-230ENST00000552960 PPP2R2BQ00005 443 aa12.11□□□□□ -0.47
HDAC7-230ENST00000552960 CYP4F3Q08477 520 aa12.11□□□□□ -0.47
HDAC7-230ENST00000552960 SELENBP1Q13228 472 aa12.11□□□□□ -0.47
HDAC7-230ENST00000552960 PWP1Q13610 501 aa12.11□□□□□ -0.47
HDAC7-230ENST00000552960 ABRAXAS2Q15018 415 aa12.11□□□□□ -0.47
HDAC7-230ENST00000552960 PHKG1Q16816 387 aa12.11□□□□□ -0.47
HDAC7-230ENST00000552960 SPANXN4Q5MJ08 99 aa12.11□□□□□ -0.47
HDAC7-230ENST00000552960 GLT6D1Q7Z4J2 308 aa12.11□□□□□ -0.47
HDAC7-230ENST00000552960 CRIPAKQ8N1N5 446 aa12.11□□□□□ -0.47
HDAC7-230ENST00000552960 MCFD2Q8NI22 146 aa12.11□□□□□ -0.47
HDAC7-230ENST00000552960 IGSF8Q969P0 613 aa12.11□□□□□ -0.47
HDAC7-230ENST00000552960 BARD1Q99728 777 aaKnown RBP12.11□□□□□ -0.47
HDAC7-230ENST00000552960 APOL5Q9BWW9 433 aa12.11□□□□□ -0.47
HDAC7-230ENST00000552960 DERL2Q9GZP9 239 aa12.11□□□□□ -0.47
HDAC7-230ENST00000552960 POLR1EQ9GZS1 481 aaKnown RBP12.11□□□□□ -0.47
HDAC7-230ENST00000552960 SLCO3A1Q9UIG8 710 aa12.11□□□□□ -0.47
HDAC7-230ENST00000552960 FBXO10Q9UK96 956 aa12.11□□□□□ -0.47
HDAC7-230ENST00000552960 ITGB1BP2Q9UKP3 347 aa12.11□□□□□ -0.47
HDAC7-230ENST00000552960 LRFN2Q9ULH4 789 aa12.11□□□□□ -0.47
HDAC7-230ENST00000552960 ANGPTL3Q9Y5C1 460 aa12.11□□□□□ -0.47
HDAC7-230ENST00000552960 NOX1Q9Y5S8 564 aa12.11□□□□□ -0.47
HDAC7-230ENST00000552960 H0Y626 953 aa12.11□□□□□ -0.47
HDAC7-230ENST00000552960 FAM20BO75063 409 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms