RNA–Protein interactions for RNA: ENST00000552890.5

TRAFD1-208, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 2

Gene TRAFD1, Length 1,043 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-208ENST00000552890 LRRC69Q6ZNQ3 347 aa9.98□□□□□ -0.81
TRAFD1-208ENST00000552890 USP53Q70EK8 1073 aa9.98□□□□□ -0.81
TRAFD1-208ENST00000552890 ARHGAP22Q7Z5H3 698 aa9.98□□□□□ -0.81
TRAFD1-208ENST00000552890 LDB1Q86U70 411 aaPredicted RBP9.98□□□□□ -0.81
TRAFD1-208ENST00000552890 NOA1Q8NC60 698 aaKnown RBP9.98□□□□□ -0.81
TRAFD1-208ENST00000552890 HMGCLL1Q8TB92 370 aa9.98□□□□□ -0.81
TRAFD1-208ENST00000552890 FGF11Q92914 225 aa9.98□□□□□ -0.81
TRAFD1-208ENST00000552890 C9orf72Q96LT7 481 aa9.98□□□□□ -0.81
TRAFD1-208ENST00000552890 SLC46A1Q96NT5 459 aa9.98□□□□□ -0.81
TRAFD1-208ENST00000552890 EFHD1Q9BUP0 239 aa9.98□□□□□ -0.81
TRAFD1-208ENST00000552890 DDA1Q9BW61 102 aa9.98□□□□□ -0.81
TRAFD1-208ENST00000552890 ZNF768Q9H5H4 540 aaKnown RBP9.98□□□□□ -0.81
TRAFD1-208ENST00000552890 FBXO8Q9NRD0 319 aa9.98□□□□□ -0.81
TRAFD1-208ENST00000552890 RABGEF1Q9UJ41 708 aa9.98□□□□□ -0.81
TRAFD1-208ENST00000552890 KLK13Q9UKR3 277 aa9.98□□□□□ -0.81
TRAFD1-208ENST00000552890 PCDHGA3Q9Y5H0 932 aa9.98□□□□□ -0.81
TRAFD1-208ENST00000552890 A0A087WUV0 522 aaPredicted RBP9.97□□□□□ -0.81
TRAFD1-208ENST00000552890 GSAPA4D1B5 854 aa9.97□□□□□ -0.81
TRAFD1-208ENST00000552890 RASGRF2O14827 1237 aa9.97□□□□□ -0.81
TRAFD1-208ENST00000552890 NIPSNAP2O75323 286 aa9.97□□□□□ -0.81
TRAFD1-208ENST00000552890 PSIP1O75475 530 aaKnown RBP9.97□□□□□ -0.81
TRAFD1-208ENST00000552890 MT-ND3P03897 115 aa9.97□□□□□ -0.81
TRAFD1-208ENST00000552890 INHBAP08476 426 aa9.97□□□□□ -0.81
TRAFD1-208ENST00000552890 ABHD2P08910 425 aa9.97□□□□□ -0.81
TRAFD1-208ENST00000552890 CD63P08962 238 aa9.97□□□□□ -0.81
TRAFD1-208ENST00000552890 HBQ1P09105 142 aa9.97□□□□□ -0.81
TRAFD1-208ENST00000552890 MYF5P13349 255 aa9.97□□□□□ -0.81
TRAFD1-208ENST00000552890 STMN1P16949 149 aa9.97□□□□□ -0.81
TRAFD1-208ENST00000552890 TYRP1P17643 537 aa9.97□□□□□ -0.81
TRAFD1-208ENST00000552890 ITGB6P18564 788 aa9.97□□□□□ -0.81
TRAFD1-208ENST00000552890 CA5AP35218 305 aa9.97□□□□□ -0.81
TRAFD1-208ENST00000552890 PCBP4P57723 403 aaKnown RBP9.97□□□□□ -0.81
TRAFD1-208ENST00000552890 ABRQ12979 859 aa9.97□□□□□ -0.81
TRAFD1-208ENST00000552890 SLC5A12Q1EHB4 618 aa9.97□□□□□ -0.81
TRAFD1-208ENST00000552890 CDKL4Q5MAI5 379 aa9.97□□□□□ -0.81
TRAFD1-208ENST00000552890 HP1BP3Q5SSJ5 553 aaPredicted RBP9.97□□□□□ -0.81
TRAFD1-208ENST00000552890 CACHD1Q5VU97 1274 aa9.97□□□□□ -0.81
TRAFD1-208ENST00000552890 CNSTQ6PJW8 725 aa9.97□□□□□ -0.81
TRAFD1-208ENST00000552890 ZDHHC24Q6UX98 284 aa9.97□□□□□ -0.81
TRAFD1-208ENST00000552890 ADAMTSL2Q86TH1 951 aa9.97□□□□□ -0.81
TRAFD1-208ENST00000552890 ZC3HC1Q86WB0 502 aaKnown RBP9.97□□□□□ -0.81
TRAFD1-208ENST00000552890 IGDCC3Q8IVU1 814 aa9.97□□□□□ -0.81
TRAFD1-208ENST00000552890 AGGF1Q8N302 714 aaeCLIP9.97□□□□□ -0.81
TRAFD1-208ENST00000552890 SPDYE1Q8NFV5 336 aaPredicted RBP9.97□□□□□ -0.81
TRAFD1-208ENST00000552890 OR4E2Q8NGC2 313 aa9.97□□□□□ -0.81
TRAFD1-208ENST00000552890 OR52E1Q8NGJ3 308 aa9.97□□□□□ -0.81
TRAFD1-208ENST00000552890 OR9A1PQ8NGU1 263 aa9.97□□□□□ -0.81
TRAFD1-208ENST00000552890 OR2L8Q8NGY9 312 aa9.97□□□□□ -0.81
TRAFD1-208ENST00000552890 CFAP61Q8NHU2 1237 aa9.97□□□□□ -0.81
TRAFD1-208ENST00000552890 ASB11Q8WXH4 323 aa9.97□□□□□ -0.81
TRAFD1-208ENST00000552890 KLHL6Q8WZ60 621 aa9.97□□□□□ -0.81
TRAFD1-208ENST00000552890 SMPDL3AQ92484 453 aa9.97□□□□□ -0.81
TRAFD1-208ENST00000552890 N4BP2L2Q92802 583 aaPredicted RBP9.97□□□□□ -0.81
TRAFD1-208ENST00000552890 ZUFSPQ96AP4 578 aa9.97□□□□□ -0.81
TRAFD1-208ENST00000552890 TCTN2Q96GX1 697 aa9.97□□□□□ -0.81
TRAFD1-208ENST00000552890 ATXN7L3BQ96GX2 97 aa9.97□□□□□ -0.81
TRAFD1-208ENST00000552890 ELMO2Q96JJ3 720 aa9.97□□□□□ -0.81
TRAFD1-208ENST00000552890 PKNOX2Q96KN3 472 aa9.97□□□□□ -0.81
TRAFD1-208ENST00000552890 CCDC74BQ96LY2 380 aa9.97□□□□□ -0.81
TRAFD1-208ENST00000552890 CCDC138Q96M89 665 aa9.97□□□□□ -0.81
TRAFD1-208ENST00000552890 GPR21Q99679 349 aa9.97□□□□□ -0.81
TRAFD1-208ENST00000552890 NUDT22Q9BRQ3 303 aa9.97□□□□□ -0.81
TRAFD1-208ENST00000552890 HGH1Q9BTY7 390 aa9.97□□□□□ -0.81
TRAFD1-208ENST00000552890 TBC1D10AQ9BXI6 508 aa9.97□□□□□ -0.81
TRAFD1-208ENST00000552890 FUT8Q9BYC5 575 aa9.97□□□□□ -0.81
TRAFD1-208ENST00000552890 DPH1Q9BZG8 443 aa9.97□□□□□ -0.81
TRAFD1-208ENST00000552890 RDH14Q9HBH5 336 aa9.97□□□□□ -0.81
TRAFD1-208ENST00000552890 PARVBQ9HBI1 364 aa9.97□□□□□ -0.81
TRAFD1-208ENST00000552890 LRRC4CQ9HCJ2 640 aa9.97□□□□□ -0.81
TRAFD1-208ENST00000552890 ANKMY1Q9P2S6 941 aa9.97□□□□□ -0.81
TRAFD1-208ENST00000552890 FETUBQ9UGM5 382 aa9.97□□□□□ -0.81
TRAFD1-208ENST00000552890 DMGDHQ9UI17 866 aaKnown RBP9.97□□□□□ -0.81
TRAFD1-208ENST00000552890 ACSL6Q9UKU0 697 aa9.97□□□□□ -0.81
TRAFD1-208ENST00000552890 NOVA2Q9UNW9 492 aaKnown RBP9.97□□□□□ -0.81
TRAFD1-208ENST00000552890 CDYLQ9Y232 598 aa9.97□□□□□ -0.81
TRAFD1-208ENST00000552890 TDRKHQ9Y2W6 561 aaKnown RBP9.97□□□□□ -0.81
TRAFD1-208ENST00000552890 LOXL2Q9Y4K0 774 aa9.97□□□□□ -0.81
TRAFD1-208ENST00000552890 ACACAQ13085 2346 aa9.96□□□□□ -0.81
TRAFD1-208ENST00000552890 DCHS1Q96JQ0 3298 aa9.96□□□□□ -0.81
TRAFD1-208ENST00000552890 MYLKQ15746 1914 aa9.96□□□□□ -0.81
TRAFD1-208ENST00000552890 ESYT3A0FGR9 886 aa9.96□□□□□ -0.82
TRAFD1-208ENST00000552890 IQCF5A8MTL0 148 aa9.96□□□□□ -0.82
TRAFD1-208ENST00000552890 TARM1B6A8C7 271 aa9.96□□□□□ -0.82
TRAFD1-208ENST00000552890 GFYI3L273 518 aa9.96□□□□□ -0.82
TRAFD1-208ENST00000552890 POLR1CO15160 346 aaPredicted RBP9.96□□□□□ -0.82
TRAFD1-208ENST00000552890 KRT37O76014 449 aa9.96□□□□□ -0.82
TRAFD1-208ENST00000552890 C1orf105O95561 183 aa9.96□□□□□ -0.82
TRAFD1-208ENST00000552890 NELFEP18615 380 aaKnown RBP9.96□□□□□ -0.82
TRAFD1-208ENST00000552890 CDH3P22223 829 aa9.96□□□□□ -0.82
TRAFD1-208ENST00000552890 SSTR1P30872 391 aa9.96□□□□□ -0.82
TRAFD1-208ENST00000552890 HNMTP50135 292 aa9.96□□□□□ -0.82
TRAFD1-208ENST00000552890 ATP1A2P50993 1020 aa9.96□□□□□ -0.82
TRAFD1-208ENST00000552890 KPNA2P52292 529 aaKnown RBP9.96□□□□□ -0.82
TRAFD1-208ENST00000552890 ATP6V0D1P61421 351 aa9.96□□□□□ -0.82
TRAFD1-208ENST00000552890 ABATP80404 500 aa9.96□□□□□ -0.82
TRAFD1-208ENST00000552890 MPP1Q00013 466 aa9.96□□□□□ -0.82
TRAFD1-208ENST00000552890 MC2RQ01718 297 aa9.96□□□□□ -0.82
TRAFD1-208ENST00000552890 PRKG2Q13237 762 aa9.96□□□□□ -0.82
TRAFD1-208ENST00000552890 CAMK2BQ13554 666 aa9.96□□□□□ -0.82
TRAFD1-208ENST00000552890 USP10Q14694 798 aaKnown RBP9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms