RNA–Protein interactions for RNA: ENST00000552839.6

TMEM116-218, Transcript of transmembrane protein 116, humanhuman

TSL 4

Gene TMEM116, Length 511 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-218ENST00000552839 NBPF19A0A087WUL8 3843 aa11.12□□□□□ -0.63
TMEM116-218ENST00000552839 CCDC151A5D8V7 595 aa11.12□□□□□ -0.63
TMEM116-218ENST00000552839 KLHL33A6NCF5 533 aa11.12□□□□□ -0.63
TMEM116-218ENST00000552839 FAM159BA6NKW6 160 aa11.12□□□□□ -0.63
TMEM116-218ENST00000552839 AGAP14A8MT82 685 aa11.12□□□□□ -0.63
TMEM116-218ENST00000552839 B4DGG1 531 aa11.12□□□□□ -0.63
TMEM116-218ENST00000552839 KPNA5O15131 536 aa11.12□□□□□ -0.63
TMEM116-218ENST00000552839 NUDT21O43809 227 aaKnown RBP11.12□□□□□ -0.63
TMEM116-218ENST00000552839 POP7O75817 140 aaKnown RBP11.12□□□□□ -0.63
TMEM116-218ENST00000552839 APOA4P06727 396 aa11.12□□□□□ -0.63
TMEM116-218ENST00000552839 F7P08709 466 aaPredicted RBP11.12□□□□□ -0.63
TMEM116-218ENST00000552839 GSTM1P09488 218 aa11.12□□□□□ -0.63
TMEM116-218ENST00000552839 SLC35G4P0C7Q5 338 aa11.12□□□□□ -0.63
TMEM116-218ENST00000552839 FGF3P11487 239 aaPredicted RBP11.12□□□□□ -0.63
TMEM116-218ENST00000552839 PKMP14618 531 aaKnown RBP11.12□□□□□ -0.63
TMEM116-218ENST00000552839 LIFP15018 202 aa11.12□□□□□ -0.63
TMEM116-218ENST00000552839 IDSP22304 550 aa11.12□□□□□ -0.63
TMEM116-218ENST00000552839 RPS3P23396 243 aaKnown RBP eCLIP11.12□□□□□ -0.63
TMEM116-218ENST00000552839 HALP42357 657 aa11.12□□□□□ -0.63
TMEM116-218ENST00000552839 ATP1A2P50993 1020 aa11.12□□□□□ -0.63
TMEM116-218ENST00000552839 CTSCP53634 463 aa11.12□□□□□ -0.63
TMEM116-218ENST00000552839 CSE1LP55060 971 aaKnown RBP11.12□□□□□ -0.63
TMEM116-218ENST00000552839 GSTM4Q03013 218 aa11.12□□□□□ -0.63
TMEM116-218ENST00000552839 CBLBQ13191 982 aa11.12□□□□□ -0.63
TMEM116-218ENST00000552839 EFTUD2Q15029 972 aaKnown RBP eCLIP11.12□□□□□ -0.63
TMEM116-218ENST00000552839 SEPT7Q16181 437 aaKnown RBP11.12□□□□□ -0.63
TMEM116-218ENST00000552839 BCL7AQ4VC05 210 aa11.12□□□□□ -0.63
TMEM116-218ENST00000552839 KHDC1Q4VXA5 237 aaKnown RBP11.12□□□□□ -0.63
TMEM116-218ENST00000552839 C4orf17Q53FE4 359 aa11.12□□□□□ -0.63
TMEM116-218ENST00000552839 PYCR3Q53H96 274 aa11.12□□□□□ -0.63
TMEM116-218ENST00000552839 LGSNQ5TDP6 509 aa11.12□□□□□ -0.63
TMEM116-218ENST00000552839 FAM45BPQ6NSW5 357 aa11.12□□□□□ -0.63
TMEM116-218ENST00000552839 CNTN4Q8IWV2 1026 aa11.12□□□□□ -0.63
TMEM116-218ENST00000552839 TRIM48Q8IWZ4 208 aa11.12□□□□□ -0.63
TMEM116-218ENST00000552839 FAM26EQ8N5C1 309 aa11.12□□□□□ -0.63
TMEM116-218ENST00000552839 IL22RA1Q8N6P7 574 aa11.12□□□□□ -0.63
TMEM116-218ENST00000552839 BEND7Q8N7W2 519 aaPredicted RBP11.12□□□□□ -0.63
TMEM116-218ENST00000552839 FAM45AQ8TCE6 357 aa11.12□□□□□ -0.63
TMEM116-218ENST00000552839 NAT14Q8WUY8 206 aa11.12□□□□□ -0.63
TMEM116-218ENST00000552839 CAVIN3Q969G5 261 aa11.12□□□□□ -0.63
TMEM116-218ENST00000552839 FAM136AQ96C01 138 aa11.12□□□□□ -0.63
TMEM116-218ENST00000552839 TSPAN17Q96FV3 270 aa11.12□□□□□ -0.63
TMEM116-218ENST00000552839 TAAR9Q96RI9 348 aa11.12□□□□□ -0.63
TMEM116-218ENST00000552839 PAFAH2Q99487 392 aa11.12□□□□□ -0.63
TMEM116-218ENST00000552839 NUDT22Q9BRQ3 303 aa11.12□□□□□ -0.63
TMEM116-218ENST00000552839 CCM2Q9BSQ5 444 aa11.12□□□□□ -0.63
TMEM116-218ENST00000552839 TMEM168Q9H0V1 697 aa11.12□□□□□ -0.63
TMEM116-218ENST00000552839 DPEP2Q9H4A9 486 aa11.12□□□□□ -0.63
TMEM116-218ENST00000552839 TRNAU1APQ9NX07 287 aaKnown RBP11.12□□□□□ -0.63
TMEM116-218ENST00000552839 MOCS1Q9NZB8 636 aa11.12□□□□□ -0.63
TMEM116-218ENST00000552839 TMPRSS11EQ9UL52 423 aa11.12□□□□□ -0.63
TMEM116-218ENST00000552839 IGLV3-16A0A075B6K0 115 aa11.11□□□□□ -0.63
TMEM116-218ENST00000552839 UQCRHLA0A096LP55 91 aa11.11□□□□□ -0.63
TMEM116-218ENST00000552839 IGHV5-10-1A0A0J9YXX1 117 aa11.11□□□□□ -0.63
TMEM116-218ENST00000552839 FAM95CA0A1B0GW59 222 aa11.11□□□□□ -0.63
TMEM116-218ENST00000552839 BLACEA4D250 179 aa11.11□□□□□ -0.63
TMEM116-218ENST00000552839 SMIM23A6NLE4 172 aa11.11□□□□□ -0.63
TMEM116-218ENST00000552839 IFRD1O00458 451 aaPredicted RBP11.11□□□□□ -0.63
TMEM116-218ENST00000552839 KCNJ13O60928 360 aa11.11□□□□□ -0.63
TMEM116-218ENST00000552839 KRT38O76015 456 aa11.11□□□□□ -0.63
TMEM116-218ENST00000552839 CPNE6O95741 557 aa11.11□□□□□ -0.63
TMEM116-218ENST00000552839 S1PR4O95977 384 aa11.11□□□□□ -0.63
TMEM116-218ENST00000552839 UQCRHP07919 91 aa11.11□□□□□ -0.63
TMEM116-218ENST00000552839 ALDH4A1P30038 563 aa11.11□□□□□ -0.63
TMEM116-218ENST00000552839 HSD17B3P37058 310 aa11.11□□□□□ -0.63
TMEM116-218ENST00000552839 CCR10P46092 362 aa11.11□□□□□ -0.63
TMEM116-218ENST00000552839 LEPRP48357 1165 aaKnown RBP11.11□□□□□ -0.63
TMEM116-218ENST00000552839 SERPINB9P50453 376 aa11.11□□□□□ -0.63
TMEM116-218ENST00000552839 MAZP56270 477 aaKnown RBP11.11□□□□□ -0.63
TMEM116-218ENST00000552839 OR1D5P58170 312 aa11.11□□□□□ -0.63
TMEM116-218ENST00000552839 CTBSQ01459 385 aa11.11□□□□□ -0.63
TMEM116-218ENST00000552839 KRT33BQ14525 404 aa11.11□□□□□ -0.63
TMEM116-218ENST00000552839 SLC29A2Q14542 456 aa11.11□□□□□ -0.63
TMEM116-218ENST00000552839 AMZ1Q400G9 498 aa11.11□□□□□ -0.63
TMEM116-218ENST00000552839 GRTP1Q5TC63 336 aa11.11□□□□□ -0.63
TMEM116-218ENST00000552839 CNSTQ6PJW8 725 aa11.11□□□□□ -0.63
TMEM116-218ENST00000552839 RAPH1Q70E73 1250 aa11.11□□□□□ -0.63
TMEM116-218ENST00000552839 CYS1Q717R9 158 aa11.11□□□□□ -0.63
TMEM116-218ENST00000552839 GALNT7Q86SF2 657 aa11.11□□□□□ -0.63
TMEM116-218ENST00000552839 GPBAR1Q8TDU6 330 aa11.11□□□□□ -0.63
TMEM116-218ENST00000552839 TSNARE1Q96NA8 513 aa11.11□□□□□ -0.63
TMEM116-218ENST00000552839 NDNQ99608 321 aa11.11□□□□□ -0.63
TMEM116-218ENST00000552839 RHOJQ9H4E5 214 aa11.11□□□□□ -0.63
TMEM116-218ENST00000552839 ZNF71Q9NQZ8 489 aaPredicted RBP11.11□□□□□ -0.63
TMEM116-218ENST00000552839 SPATS2LQ9NUQ6 558 aaKnown RBP11.11□□□□□ -0.63
TMEM116-218ENST00000552839 TAS2R13Q9NYV9 303 aa11.11□□□□□ -0.63
TMEM116-218ENST00000552839 AKAP7Q9P0M2 348 aaPredicted RBP11.11□□□□□ -0.63
TMEM116-218ENST00000552839 TSR3Q9UJK0 312 aaKnown RBP11.11□□□□□ -0.63
TMEM116-218ENST00000552839 PCDHGA3Q9Y5H0 932 aa11.11□□□□□ -0.63
TMEM116-218ENST00000552839 B3GALT1Q9Y5Z6 326 aa11.11□□□□□ -0.63
TMEM116-218ENST00000552839 DNMT3AQ9Y6K1 912 aaPredicted RBP11.11□□□□□ -0.63
TMEM116-218ENST00000552839 ICE1Q9Y2F5 2266 aa11.11□□□□□ -0.63
TMEM116-218ENST00000552839 MGAT4DA6NG13 374 aa11.1□□□□□ -0.63
TMEM116-218ENST00000552839 GOLGA6L10A6NI86 522 aa11.1□□□□□ -0.63
TMEM116-218ENST00000552839 LIN7AO14910 233 aaPredicted RBP11.1□□□□□ -0.63
TMEM116-218ENST00000552839 HGSO14964 777 aaPredicted RBP11.1□□□□□ -0.63
TMEM116-218ENST00000552839 CHUKO15111 745 aa11.1□□□□□ -0.63
TMEM116-218ENST00000552839 NIPSNAP2O75323 286 aa11.1□□□□□ -0.63
TMEM116-218ENST00000552839 PIAS1O75925 651 aa11.1□□□□□ -0.63
TMEM116-218ENST00000552839 HAUS5O94927 633 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms