RNA–Protein interactions for RNA: ENST00000551242.5

ERBB3-219, Transcript of erb-b2 receptor tyrosine kinase 3, humanhuman

TSL 1 (best)

Gene ERBB3, Length 2,755 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB3-219ENST00000551242 PCDHGA12O60330 932 aa12□□□□□ -0.49
ERBB3-219ENST00000551242 WBP4O75554 376 aaKnown RBP12□□□□□ -0.49
ERBB3-219ENST00000551242 GJB3O75712 270 aa12□□□□□ -0.49
ERBB3-219ENST00000551242 UGT2B10P36537 528 aa12□□□□□ -0.49
ERBB3-219ENST00000551242 SLC15A1P46059 708 aa12□□□□□ -0.49
ERBB3-219ENST00000551242 PPP3CCP48454 512 aa12□□□□□ -0.49
ERBB3-219ENST00000551242 MRPL19P49406 292 aaKnown RBP12□□□□□ -0.49
ERBB3-219ENST00000551242 TAF6P49848 677 aa12□□□□□ -0.49
ERBB3-219ENST00000551242 TP53BP2Q13625 1128 aa12□□□□□ -0.49
ERBB3-219ENST00000551242 KCTD2Q14681 263 aa12□□□□□ -0.49
ERBB3-219ENST00000551242 TIGD6Q17RP2 521 aa12□□□□□ -0.49
ERBB3-219ENST00000551242 SPANXN2Q5MJ10 180 aa12□□□□□ -0.49
ERBB3-219ENST00000551242 GPRIN3Q6ZVF9 776 aa12□□□□□ -0.49
ERBB3-219ENST00000551242 AGBL3Q8NEM8 1001 aa12□□□□□ -0.49
ERBB3-219ENST00000551242 ZMIZ2Q8NF64 920 aa12□□□□□ -0.49
ERBB3-219ENST00000551242 JPH3Q8WXH2 748 aaPredicted RBP12□□□□□ -0.49
ERBB3-219ENST00000551242 KIAA1191Q96A73 305 aa12□□□□□ -0.49
ERBB3-219ENST00000551242 FUBP1Q96AE4 644 aaKnown RBP12□□□□□ -0.49
ERBB3-219ENST00000551242 FYTTD1Q96QD9 318 aaKnown RBP12□□□□□ -0.49
ERBB3-219ENST00000551242 KCNS3Q9BQ31 491 aa12□□□□□ -0.49
ERBB3-219ENST00000551242 CHCHD6Q9BRQ6 235 aa12□□□□□ -0.49
ERBB3-219ENST00000551242 NUSAP1Q9BXS6 441 aaKnown RBP12□□□□□ -0.49
ERBB3-219ENST00000551242 RPRD1BQ9NQG5 326 aaKnown RBP12□□□□□ -0.49
ERBB3-219ENST00000551242 BTBD3Q9Y2F9 522 aa12□□□□□ -0.49
ERBB3-219ENST00000551242 TIMM13Q9Y5L4 95 aaPredicted RBP12□□□□□ -0.49
ERBB3-219ENST00000551242 ARL5AQ9Y689 179 aa12□□□□□ -0.49
ERBB3-219ENST00000551242 BTN3A1O00481 513 aa11.99□□□□□ -0.49
ERBB3-219ENST00000551242 CRISP3P54108 245 aa11.99□□□□□ -0.49
ERBB3-219ENST00000551242 ERVPABLB-1P60509 514 aa11.99□□□□□ -0.49
ERBB3-219ENST00000551242 CXCR4P61073 352 aa11.99□□□□□ -0.49
ERBB3-219ENST00000551242 SLAMF1Q13291 335 aa11.99□□□□□ -0.49
ERBB3-219ENST00000551242 KRR1Q13601 381 aaKnown RBP11.99□□□□□ -0.49
ERBB3-219ENST00000551242 TNFAIP1Q13829 316 aa11.99□□□□□ -0.49
ERBB3-219ENST00000551242 IRF3Q14653 427 aa11.99□□□□□ -0.49
ERBB3-219ENST00000551242 MFSD10Q14728 455 aa11.99□□□□□ -0.49
ERBB3-219ENST00000551242 FAM174BQ3ZCQ3 159 aa11.99□□□□□ -0.49
ERBB3-219ENST00000551242 BPHLQ86WA6 291 aaPredicted RBP11.99□□□□□ -0.49
ERBB3-219ENST00000551242 PGBD5Q8N414 524 aa11.99□□□□□ -0.49
ERBB3-219ENST00000551242 AADATQ8N5Z0 425 aa11.99□□□□□ -0.49
ERBB3-219ENST00000551242 SIMC1Q8NDZ2 872 aa11.99□□□□□ -0.49
ERBB3-219ENST00000551242 SLC13A3Q8WWT9 602 aa11.99□□□□□ -0.49
ERBB3-219ENST00000551242 GTF2H4Q92759 462 aa11.99□□□□□ -0.49
ERBB3-219ENST00000551242 PHOX2BQ99453 314 aa11.99□□□□□ -0.49
ERBB3-219ENST00000551242 APOL4Q9BPW4 351 aa11.99□□□□□ -0.49
ERBB3-219ENST00000551242 PRRG3Q9BZD7 231 aa11.99□□□□□ -0.49
ERBB3-219ENST00000551242 RNF39Q9H2S5 420 aa11.99□□□□□ -0.49
ERBB3-219ENST00000551242 CRTAC1Q9NQ79 661 aa11.99□□□□□ -0.49
ERBB3-219ENST00000551242 UBQLN1Q9UMX0 589 aaKnown RBP11.99□□□□□ -0.49
ERBB3-219ENST00000551242 DERAQ9Y315 318 aa11.99□□□□□ -0.49
ERBB3-219ENST00000551242 DICER1Q9UPY3 1922 aaKnown RBP11.99□□□□□ -0.49
ERBB3-219ENST00000551242 MROH6A6NGR9 719 aa11.99□□□□□ -0.49
ERBB3-219ENST00000551242 LOC110117498-PIK3R3F6TDL0 507 aa11.99□□□□□ -0.49
ERBB3-219ENST00000551242 ANKRD28O15084 1053 aa11.99□□□□□ -0.49
ERBB3-219ENST00000551242 LDB2O43679 373 aa11.99□□□□□ -0.49
ERBB3-219ENST00000551242 TLL1O43897 1013 aa11.99□□□□□ -0.49
ERBB3-219ENST00000551242 RHOBTB1O94844 696 aa11.99□□□□□ -0.49
ERBB3-219ENST00000551242 ZNF682O95780 498 aa11.99□□□□□ -0.49
ERBB3-219ENST00000551242 GLP2RO95838 553 aa11.99□□□□□ -0.49
ERBB3-219ENST00000551242 F9P00740 461 aa11.99□□□□□ -0.49
ERBB3-219ENST00000551242 MSH3P20585 1137 aa11.99□□□□□ -0.49
ERBB3-219ENST00000551242 HOXA9P31269 272 aa11.99□□□□□ -0.49
ERBB3-219ENST00000551242 LILRA4P59901 499 aa11.99□□□□□ -0.49
ERBB3-219ENST00000551242 CYP4F2P78329 520 aa11.99□□□□□ -0.49
ERBB3-219ENST00000551242 ZNF33AQ06730 810 aa11.99□□□□□ -0.49
ERBB3-219ENST00000551242 AP5B1Q2VPB7 878 aa11.99□□□□□ -0.49
ERBB3-219ENST00000551242 SIRPB2Q5JXA9 342 aa11.99□□□□□ -0.49
ERBB3-219ENST00000551242 LETMD1Q6P1Q0 360 aa11.99□□□□□ -0.49
ERBB3-219ENST00000551242 SHQ1Q6PI26 577 aaKnown RBP11.99□□□□□ -0.49
ERBB3-219ENST00000551242 TRAF7Q6Q0C0 670 aa11.99□□□□□ -0.49
ERBB3-219ENST00000551242 ZNF517Q6ZMY9 492 aaPredicted RBP11.99□□□□□ -0.49
ERBB3-219ENST00000551242 Q6ZPB1 254 aaPredicted RBP11.99□□□□□ -0.49
ERBB3-219ENST00000551242 GALNT10Q86SR1 603 aa11.99□□□□□ -0.49
ERBB3-219ENST00000551242 ZDHHC21Q8IVQ6 265 aa11.99□□□□□ -0.49
ERBB3-219ENST00000551242 IQCF2Q8IXL9 164 aa11.99□□□□□ -0.49
ERBB3-219ENST00000551242 LINC01465Q8N7H1 131 aa11.99□□□□□ -0.49
ERBB3-219ENST00000551242 OR13C4Q8NGS5 318 aa11.99□□□□□ -0.49
ERBB3-219ENST00000551242 BLOC1S5Q8TDH9 187 aa11.99□□□□□ -0.49
ERBB3-219ENST00000551242 PGAP3Q96FM1 320 aaPredicted RBP11.99□□□□□ -0.49
ERBB3-219ENST00000551242 COPS4Q9BT78 406 aa11.99□□□□□ -0.49
ERBB3-219ENST00000551242 RUBCNLQ9H714 662 aa11.99□□□□□ -0.49
ERBB3-219ENST00000551242 RANGRFQ9HD47 186 aaPredicted RBP11.99□□□□□ -0.49
ERBB3-219ENST00000551242 TSR3Q9UJK0 312 aaKnown RBP11.99□□□□□ -0.49
ERBB3-219ENST00000551242 ZNF236Q9UL36 1845 aa11.99□□□□□ -0.49
ERBB3-219ENST00000551242 A0A0G2JMP0 313 aa11.98□□□□□ -0.49
ERBB3-219ENST00000551242 A0A0X1KG70 313 aa11.98□□□□□ -0.49
ERBB3-219ENST00000551242 MYBPHLA2RUH7 354 aa11.98□□□□□ -0.49
ERBB3-219ENST00000551242 hCG_2039718K7EN88 272 aa11.98□□□□□ -0.49
ERBB3-219ENST00000551242 MEN1O00255 615 aa11.98□□□□□ -0.49
ERBB3-219ENST00000551242 CAPN1P07384 714 aa11.98□□□□□ -0.49
ERBB3-219ENST00000551242 SERPINF2P08697 491 aa11.98□□□□□ -0.49
ERBB3-219ENST00000551242 MYCLP1P12525 358 aaPredicted RBP11.98□□□□□ -0.49
ERBB3-219ENST00000551242 HTR2BP41595 481 aa11.98□□□□□ -0.49
ERBB3-219ENST00000551242 GPR50Q13585 617 aa11.98□□□□□ -0.49
ERBB3-219ENST00000551242 C18orf21Q32NC0 220 aaPredicted RBP11.98□□□□□ -0.49
ERBB3-219ENST00000551242 NXF2Q9GZY0 626 aaKnown RBP11.98□□□□□ -0.49
ERBB3-219ENST00000551242 ARNT2Q9HBZ2 717 aa11.98□□□□□ -0.49
ERBB3-219ENST00000551242 TM9SF3Q9HD45 589 aa11.98□□□□□ -0.49
ERBB3-219ENST00000551242 CCNB1IP1Q9NPC3 277 aa11.98□□□□□ -0.49
ERBB3-219ENST00000551242 NPAP1Q9NZP6 1156 aa11.98□□□□□ -0.49
ERBB3-219ENST00000551242 HACL1Q9UJ83 578 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms