RNA–Protein interactions for RNA: ENST00000550987.5

CPSF6-206, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 4

Gene CPSF6, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-206ENST00000550987 LDB2O43679 373 aa5.21□□□□□ -1.58
CPSF6-206ENST00000550987 SYNCRIPO60506 623 aaKnown RBP5.21□□□□□ -1.58
CPSF6-206ENST00000550987 TSPAN1O60635 241 aa5.21□□□□□ -1.58
CPSF6-206ENST00000550987 LUC7L3O95232 432 aaKnown RBP5.21□□□□□ -1.58
CPSF6-206ENST00000550987 C22orf31O95567 290 aa5.21□□□□□ -1.58
CPSF6-206ENST00000550987 ATP6V1B1P15313 513 aa5.21□□□□□ -1.58
CPSF6-206ENST00000550987 ARSBP15848 533 aa5.21□□□□□ -1.58
CPSF6-206ENST00000550987 ACHEP22303 614 aa5.21□□□□□ -1.58
CPSF6-206ENST00000550987 AMPHP49418 695 aa5.21□□□□□ -1.58
CPSF6-206ENST00000550987 RASSF2P50749 326 aa5.21□□□□□ -1.58
CPSF6-206ENST00000550987 RBPJQ06330 500 aa5.21□□□□□ -1.58
CPSF6-206ENST00000550987 PTGR1Q14914 329 aa5.21□□□□□ -1.58
CPSF6-206ENST00000550987 TRIP6Q15654 476 aaKnown RBP5.21□□□□□ -1.58
CPSF6-206ENST00000550987 CCDC6Q16204 474 aa5.21□□□□□ -1.58
CPSF6-206ENST00000550987 CDC37Q16543 378 aaPredicted RBP5.21□□□□□ -1.58
CPSF6-206ENST00000550987 FSCBQ5H9T9 825 aa5.21□□□□□ -1.58
CPSF6-206ENST00000550987 N4BP2L1Q5TBK1 243 aaPredicted RBP5.21□□□□□ -1.58
CPSF6-206ENST00000550987 ASPHD1Q5U4P2 390 aa5.21□□□□□ -1.58
CPSF6-206ENST00000550987 OTUD1Q5VV17 481 aaPredicted RBP5.21□□□□□ -1.58
CPSF6-206ENST00000550987 PPP1R21Q6ZMI0 780 aa5.21□□□□□ -1.58
CPSF6-206ENST00000550987 TPRG1Q6ZUI0 275 aa5.21□□□□□ -1.58
CPSF6-206ENST00000550987 RD3Q7Z3Z2 195 aa5.21□□□□□ -1.58
CPSF6-206ENST00000550987 GLRX5Q86SX6 157 aa5.21□□□□□ -1.58
CPSF6-206ENST00000550987 CEP57Q86XR8 500 aa5.21□□□□□ -1.58
CPSF6-206ENST00000550987 UNC45BQ8IWX7 931 aa5.21□□□□□ -1.58
CPSF6-206ENST00000550987 CCDC170Q8IYT3 715 aa5.21□□□□□ -1.58
CPSF6-206ENST00000550987 CCAR2Q8N163 923 aaKnown RBP5.21□□□□□ -1.58
CPSF6-206ENST00000550987 IGFBPL1Q8WX77 278 aa5.21□□□□□ -1.58
CPSF6-206ENST00000550987 DNAAF4Q8WXU2 420 aa5.21□□□□□ -1.58
CPSF6-206ENST00000550987 DDB2Q92466 427 aa5.21□□□□□ -1.58
CPSF6-206ENST00000550987 GRAMD2BQ96HH9 432 aa5.21□□□□□ -1.58
CPSF6-206ENST00000550987 MGME1Q9BQP7 344 aa5.21□□□□□ -1.58
CPSF6-206ENST00000550987 MRPL9Q9BYD2 267 aaKnown RBP5.21□□□□□ -1.58
CPSF6-206ENST00000550987 PRSS22Q9GZN4 317 aa5.21□□□□□ -1.58
CPSF6-206ENST00000550987 FAM234AQ9H0X4 552 aa5.21□□□□□ -1.58
CPSF6-206ENST00000550987 KCNN2Q9H2S1 579 aa5.21□□□□□ -1.58
CPSF6-206ENST00000550987 CLK4Q9HAZ1 481 aaKnown RBP5.21□□□□□ -1.58
CPSF6-206ENST00000550987 SEBOXQ9HB31 216 aaPredicted RBP5.21□□□□□ -1.58
CPSF6-206ENST00000550987 KRCC1Q9NPI7 259 aaPredicted RBP5.21□□□□□ -1.58
CPSF6-206ENST00000550987 TUBA8Q9NY65 449 aaPredicted RBP5.21□□□□□ -1.58
CPSF6-206ENST00000550987 FLRT1Q9NZU1 646 aa5.21□□□□□ -1.58
CPSF6-206ENST00000550987 IL36RNQ9UBH0 155 aa5.21□□□□□ -1.58
CPSF6-206ENST00000550987 WBP11Q9Y2W2 641 aaKnown RBP5.21□□□□□ -1.58
CPSF6-206ENST00000550987 CENPJQ9HC77 1338 aaPredicted RBP5.21□□□□□ -1.58
CPSF6-206ENST00000550987 CCL15-CCL14A0A0B4J2E2 113 aa5.2□□□□□ -1.58
CPSF6-206ENST00000550987 EPOPA6NHQ4 379 aa5.2□□□□□ -1.58
CPSF6-206ENST00000550987 PSMD14O00487 310 aa5.2□□□□□ -1.58
CPSF6-206ENST00000550987 VWA5AO00534 786 aa5.2□□□□□ -1.58
CPSF6-206ENST00000550987 SLC7A4O43246 635 aa5.2□□□□□ -1.58
CPSF6-206ENST00000550987 FSHBP01225 129 aa5.2□□□□□ -1.58
CPSF6-206ENST00000550987 LINGO3P0C6S8 592 aa5.2□□□□□ -1.58
CPSF6-206ENST00000550987 PDGFRAP16234 1089 aa5.2□□□□□ -1.58
CPSF6-206ENST00000550987 ALDH1B1P30837 517 aa5.2□□□□□ -1.58
CPSF6-206ENST00000550987 PRKCIP41743 596 aa5.2□□□□□ -1.58
CPSF6-206ENST00000550987 SNRPEP62304 92 aaKnown RBP5.2□□□□□ -1.58
CPSF6-206ENST00000550987 PPP2R5CQ13362 524 aa5.2□□□□□ -1.58
CPSF6-206ENST00000550987 CTF1Q16619 201 aa5.2□□□□□ -1.58
CPSF6-206ENST00000550987 CCL15Q16663 113 aa5.2□□□□□ -1.58
CPSF6-206ENST00000550987 ZNF284Q2VY69 593 aa5.2□□□□□ -1.58
CPSF6-206ENST00000550987 MYLK3Q32MK0 819 aa5.2□□□□□ -1.58
CPSF6-206ENST00000550987 TEX38Q6PEX7 206 aa5.2□□□□□ -1.58
CPSF6-206ENST00000550987 ZBTB49Q6ZSB9 765 aa5.2□□□□□ -1.58
CPSF6-206ENST00000550987 DET1Q7L5Y6 550 aa5.2□□□□□ -1.58
CPSF6-206ENST00000550987 SPATA21Q7Z572 469 aa5.2□□□□□ -1.58
CPSF6-206ENST00000550987 ADIPOR2Q86V24 386 aa5.2□□□□□ -1.58
CPSF6-206ENST00000550987 CEP57L1Q8IYX8 460 aa5.2□□□□□ -1.58
CPSF6-206ENST00000550987 CHCHD4Q8N4Q1 142 aa5.2□□□□□ -1.58
CPSF6-206ENST00000550987 AADATQ8N5Z0 425 aa5.2□□□□□ -1.58
CPSF6-206ENST00000550987 C7orf57Q8NEG2 295 aa5.2□□□□□ -1.58
CPSF6-206ENST00000550987 TBC1D16Q8TBP0 767 aa5.2□□□□□ -1.58
CPSF6-206ENST00000550987 TAS1R2Q8TE23 839 aa5.2□□□□□ -1.58
CPSF6-206ENST00000550987 RND1Q92730 232 aa5.2□□□□□ -1.58
CPSF6-206ENST00000550987 INPP5DQ92835 1189 aa5.2□□□□□ -1.58
CPSF6-206ENST00000550987 CCDC43Q96MW1 224 aaKnown RBP5.2□□□□□ -1.58
CPSF6-206ENST00000550987 NEK1Q96PY6 1258 aa5.2□□□□□ -1.58
CPSF6-206ENST00000550987 EGFL8Q99944 293 aa5.2□□□□□ -1.58
CPSF6-206ENST00000550987 HAUS8Q9BT25 410 aa5.2□□□□□ -1.58
CPSF6-206ENST00000550987 PPIL3Q9H2H8 161 aaKnown RBP5.2□□□□□ -1.58
CPSF6-206ENST00000550987 ANKZF1Q9H8Y5 726 aa5.2□□□□□ -1.58
CPSF6-206ENST00000550987 MMP25Q9NPA2 562 aa5.2□□□□□ -1.58
CPSF6-206ENST00000550987 MTRRQ9UBK8 725 aa5.2□□□□□ -1.58
CPSF6-206ENST00000550987 HS3ST3B1Q9Y662 390 aa5.2□□□□□ -1.58
CPSF6-206ENST00000550987 RLFQ13129 1914 aa5.2□□□□□ -1.58
CPSF6-206ENST00000550987 AKAP13Q12802 2813 aa5.2□□□□□ -1.58
CPSF6-206ENST00000550987 NCAPD2Q15021 1401 aa5.2□□□□□ -1.58
CPSF6-206ENST00000550987 SPENQ96T58 3664 aaKnown RBP5.2□□□□□ -1.58
CPSF6-206ENST00000550987 LOC100996750A0A140TA64 210 aa5.19□□□□□ -1.58
CPSF6-206ENST00000550987 E5RJQ4 531 aa5.19□□□□□ -1.58
CPSF6-206ENST00000550987 J3QR06 171 aa5.19□□□□□ -1.58
CPSF6-206ENST00000550987 CNOT3O75175 753 aaKnown RBP5.19□□□□□ -1.58
CPSF6-206ENST00000550987 BAG2O95816 211 aa5.19□□□□□ -1.58
CPSF6-206ENST00000550987 OR52Z1P0C646 297 aa5.19□□□□□ -1.58
CPSF6-206ENST00000550987 GNLYP22749 145 aa5.19□□□□□ -1.58
CPSF6-206ENST00000550987 KELP23276 732 aa5.19□□□□□ -1.58
CPSF6-206ENST00000550987 GABRA5P31644 462 aa5.19□□□□□ -1.58
CPSF6-206ENST00000550987 ATP6V1E1P36543 226 aa5.19□□□□□ -1.58
CPSF6-206ENST00000550987 COMPP49747 757 aaPredicted RBP5.19□□□□□ -1.58
CPSF6-206ENST00000550987 YWHAHQ04917 246 aaPredicted RBP5.19□□□□□ -1.58
CPSF6-206ENST00000550987 HSPB3Q12988 150 aa5.19□□□□□ -1.58
CPSF6-206ENST00000550987 PTK6Q13882 451 aa5.19□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms