RNA–Protein interactions for RNA: ENST00000550104.5

ATXN2-219, Transcript of ataxin 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ATXN2, Length 4,648 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN2-219ENST00000550104 PER2O15055 1255 aa16.51■□□□□ 0.23
ATXN2-219ENST00000550104 SUV39H1O43463 412 aa16.51■□□□□ 0.23
ATXN2-219ENST00000550104 TTKP33981 857 aa16.51■□□□□ 0.23
ATXN2-219ENST00000550104 ARF5P84085 180 aa16.51■□□□□ 0.23
ATXN2-219ENST00000550104 PDCD4Q53EL6 469 aaKnown RBP16.51■□□□□ 0.23
ATXN2-219ENST00000550104 FRG2Q64ET8 278 aa16.51■□□□□ 0.23
ATXN2-219ENST00000550104 BLOC1S3Q6QNY0 202 aa16.51■□□□□ 0.23
ATXN2-219ENST00000550104 GRASPQ7Z6J2 395 aaPredicted RBP16.51■□□□□ 0.23
ATXN2-219ENST00000550104 FAM210AQ96ND0 272 aa16.51■□□□□ 0.23
ATXN2-219ENST00000550104 FRG2BQ96QU4 278 aa16.51■□□□□ 0.23
ATXN2-219ENST00000550104 BBS4Q96RK4 519 aa16.51■□□□□ 0.23
ATXN2-219ENST00000550104 KLF16Q9BXK1 252 aaPredicted RBP16.51■□□□□ 0.23
ATXN2-219ENST00000550104 NLNQ9BYT8 704 aa16.51■□□□□ 0.23
ATXN2-219ENST00000550104 TGM5O43548 720 aa16.51■□□□□ 0.23
ATXN2-219ENST00000550104 CLIC3O95833 236 aa16.51■□□□□ 0.23
ATXN2-219ENST00000550104 C1QAP02745 245 aa16.51■□□□□ 0.23
ATXN2-219ENST00000550104 RFX3P48380 749 aa16.51■□□□□ 0.23
ATXN2-219ENST00000550104 KCNC1P48547 511 aa16.51■□□□□ 0.23
ATXN2-219ENST00000550104 ERVPABLB-1P60509 514 aa16.51■□□□□ 0.23
ATXN2-219ENST00000550104 TP53BP2Q13625 1128 aa16.51■□□□□ 0.23
ATXN2-219ENST00000550104 INTS11Q5TA45 600 aaKnown RBP16.51■□□□□ 0.23
ATXN2-219ENST00000550104 KLHDC10Q6PID8 442 aa16.51■□□□□ 0.23
ATXN2-219ENST00000550104 CHSY3Q70JA7 882 aa16.51■□□□□ 0.23
ATXN2-219ENST00000550104 BEND7Q8N7W2 519 aaPredicted RBP16.51■□□□□ 0.23
ATXN2-219ENST00000550104 LINC01599Q8WXQ3 324 aa16.51■□□□□ 0.23
ATXN2-219ENST00000550104 SORCS1Q8WY21 1168 aa16.51■□□□□ 0.23
ATXN2-219ENST00000550104 H0Y858 1186 aa16.51■□□□□ 0.23
ATXN2-219ENST00000550104 hCG_2039718K7EN88 272 aa16.51■□□□□ 0.23
ATXN2-219ENST00000550104 SLC35G4P0C7Q5 338 aa16.51■□□□□ 0.23
ATXN2-219ENST00000550104 LSM3P62310 102 aaKnown RBP16.51■□□□□ 0.23
ATXN2-219ENST00000550104 ANXA8L1Q5VT79 327 aa16.51■□□□□ 0.23
ATXN2-219ENST00000550104 STX19Q8N4C7 294 aa16.51■□□□□ 0.23
ATXN2-219ENST00000550104 C11orf49Q9H6J7 331 aa16.51■□□□□ 0.23
ATXN2-219ENST00000550104 FER1L6Q2WGJ9 1857 aa16.51■□□□□ 0.23
ATXN2-219ENST00000550104 RFPL2O75678 378 aa16.5■□□□□ 0.23
ATXN2-219ENST00000550104 PPP2R1BP30154 601 aa16.5■□□□□ 0.23
ATXN2-219ENST00000550104 CAPGP40121 348 aa16.5■□□□□ 0.23
ATXN2-219ENST00000550104 CASP9P55211 416 aa16.5■□□□□ 0.23
ATXN2-219ENST00000550104 ELP6Q0PNE2 266 aa16.5■□□□□ 0.23
ATXN2-219ENST00000550104 OR4F3Q6IEY1 312 aa16.5■□□□□ 0.23
ATXN2-219ENST00000550104 RERGLQ9H628 205 aa16.5■□□□□ 0.23
ATXN2-219ENST00000550104 PALMDQ9NP74 551 aa16.5■□□□□ 0.23
ATXN2-219ENST00000550104 IL26Q9NPH9 171 aa16.5■□□□□ 0.23
ATXN2-219ENST00000550104 MAPRE3Q9UPY8 281 aa16.5■□□□□ 0.23
ATXN2-219ENST00000550104 IGLV3-10A0A075B6K4 115 aa16.5■□□□□ 0.23
ATXN2-219ENST00000550104 WNT9AO14904 365 aa16.5■□□□□ 0.23
ATXN2-219ENST00000550104 PRKD3O94806 890 aa16.5■□□□□ 0.23
ATXN2-219ENST00000550104 ZBTB11O95625 1053 aaPredicted RBP16.5■□□□□ 0.23
ATXN2-219ENST00000550104 EBLN1P0CF75 366 aa16.5■□□□□ 0.23
ATXN2-219ENST00000550104 TUBB3Q13509 450 aa16.5■□□□□ 0.23
ATXN2-219ENST00000550104 DCTN2Q13561 401 aaKnown RBP16.5■□□□□ 0.23
ATXN2-219ENST00000550104 ATP13A5Q4VNC0 1218 aa16.5■□□□□ 0.23
ATXN2-219ENST00000550104 OGFRL1Q5TC84 451 aaPredicted RBP16.5■□□□□ 0.23
ATXN2-219ENST00000550104 BHLHA9Q7RTU4 235 aa16.5■□□□□ 0.23
ATXN2-219ENST00000550104 PLEKHA8Q96JA3 519 aa16.5■□□□□ 0.23
ATXN2-219ENST00000550104 PRICKLE1Q96MT3 831 aaPredicted RBP16.5■□□□□ 0.23
ATXN2-219ENST00000550104 ATOH8Q96SQ7 321 aa16.5■□□□□ 0.23
ATXN2-219ENST00000550104 C8orf4Q9NR00 106 aa16.5■□□□□ 0.23
ATXN2-219ENST00000550104 RIMKLBQ9ULI2 386 aa16.5■□□□□ 0.23
ATXN2-219ENST00000550104 OAS3Q9Y6K5 1087 aaKnown RBP16.5■□□□□ 0.23
ATXN2-219ENST00000550104 SAP18O00422 153 aaKnown RBP16.5■□□□□ 0.23
ATXN2-219ENST00000550104 NFATC1O95644 943 aa16.5■□□□□ 0.23
ATXN2-219ENST00000550104 ASLP04424 464 aa16.5■□□□□ 0.23
ATXN2-219ENST00000550104 GSTM1P09488 218 aa16.5■□□□□ 0.23
ATXN2-219ENST00000550104 PREPP48147 710 aa16.5■□□□□ 0.23
ATXN2-219ENST00000550104 PPIGQ13427 754 aaKnown RBP eCLIP16.5■□□□□ 0.23
ATXN2-219ENST00000550104 MED27Q6P2C8 311 aa16.5■□□□□ 0.23
ATXN2-219ENST00000550104 LARP4Q71RC2 724 aaKnown RBP eCLIP16.5■□□□□ 0.23
ATXN2-219ENST00000550104 THAP5Q7Z6K1 395 aa16.5■□□□□ 0.23
ATXN2-219ENST00000550104 CYP4Z1Q86W10 505 aa16.5■□□□□ 0.23
ATXN2-219ENST00000550104 RGL4Q8IZJ4 473 aa16.5■□□□□ 0.23
ATXN2-219ENST00000550104 IRF7Q92985 503 aa16.5■□□□□ 0.23
ATXN2-219ENST00000550104 SLC22A12Q96S37 553 aa16.5■□□□□ 0.23
ATXN2-219ENST00000550104 IL36AQ9UHA7 158 aa16.5■□□□□ 0.23
ATXN2-219ENST00000550104 GOLGB1Q14789 3259 aaKnown RBP16.5■□□□□ 0.23
ATXN2-219ENST00000550104 MAGEB17A8MXT2 336 aa16.5■□□□□ 0.23
ATXN2-219ENST00000550104 STK25O00506 426 aa16.5■□□□□ 0.23
ATXN2-219ENST00000550104 NME4O00746 187 aa16.5■□□□□ 0.23
ATXN2-219ENST00000550104 S100A5P33763 92 aa16.5■□□□□ 0.23
ATXN2-219ENST00000550104 DEFB103AP81534 67 aa16.5■□□□□ 0.23
ATXN2-219ENST00000550104 ALDH6A1Q02252 535 aaKnown RBP16.5■□□□□ 0.23
ATXN2-219ENST00000550104 C2orf80Q0P641 193 aa16.5■□□□□ 0.23
ATXN2-219ENST00000550104 ZNF648Q5T619 568 aaPredicted RBP16.5■□□□□ 0.23
ATXN2-219ENST00000550104 PGM2L1Q6PCE3 622 aa16.5■□□□□ 0.23
ATXN2-219ENST00000550104 SHKBP1Q8TBC3 707 aa16.5■□□□□ 0.23
ATXN2-219ENST00000550104 KRT84Q9NSB2 600 aa16.5■□□□□ 0.23
ATXN2-219ENST00000550104 IMP3Q9NV31 184 aaKnown RBP16.5■□□□□ 0.23
ATXN2-219ENST00000550104 USE1Q9NZ43 259 aa16.5■□□□□ 0.23
ATXN2-219ENST00000550104 PCDHGA11Q9Y5H2 935 aa16.5■□□□□ 0.23
ATXN2-219ENST00000550104 H3BN98 237 aa16.49■□□□□ 0.23
ATXN2-219ENST00000550104 SLC6A2P23975 617 aa16.49■□□□□ 0.23
ATXN2-219ENST00000550104 VIPR1P32241 457 aa16.49■□□□□ 0.23
ATXN2-219ENST00000550104 YAP1P46937 504 aaKnown RBP16.49■□□□□ 0.23
ATXN2-219ENST00000550104 LDLRAP1Q5SW96 308 aa16.49■□□□□ 0.23
ATXN2-219ENST00000550104 LETMD1Q6P1Q0 360 aa16.49■□□□□ 0.23
ATXN2-219ENST00000550104 TMEM25Q86YD3 366 aa16.49■□□□□ 0.23
ATXN2-219ENST00000550104 AURKBQ96GD4 344 aaPredicted RBP16.49■□□□□ 0.23
ATXN2-219ENST00000550104 GORASP1Q9BQQ3 440 aa16.49■□□□□ 0.23
ATXN2-219ENST00000550104 RAPGEFL1Q9UHV5 662 aa16.49■□□□□ 0.23
ATXN2-219ENST00000550104 LEFTY1O75610 366 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms