RNA–Protein interactions for RNA: ENST00000550008.6

CUX1-214, Transcript of cut like homeobox 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CUX1, Length 4,350 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-214ENST00000550008 HERC3Q15034 1050 aa14.69□□□□□ -0.06
CUX1-214ENST00000550008 PARGQ86W56 976 aa14.69□□□□□ -0.06
CUX1-214ENST00000550008 BTBD9Q96Q07 612 aa14.69□□□□□ -0.06
CUX1-214ENST00000550008 C1QTNF7Q9BXJ2 289 aa14.69□□□□□ -0.06
CUX1-214ENST00000550008 HCFC1R1Q9NWW0 138 aa14.69□□□□□ -0.06
CUX1-214ENST00000550008 MSRAQ9UJ68 235 aa14.69□□□□□ -0.06
CUX1-214ENST00000550008 PNMA8CA0A1B0GUJ8 204 aa14.69□□□□□ -0.06
CUX1-214ENST00000550008 VARSP26640 1264 aaKnown RBP14.69□□□□□ -0.06
CUX1-214ENST00000550008 HTR6P50406 440 aa14.69□□□□□ -0.06
CUX1-214ENST00000550008 CCNIQ14094 377 aa14.69□□□□□ -0.06
CUX1-214ENST00000550008 TRIM40Q6P9F5 258 aa14.69□□□□□ -0.06
CUX1-214ENST00000550008 TCAIMQ8N3R3 496 aa14.69□□□□□ -0.06
CUX1-214ENST00000550008 OR5AK3PQ8NH89 298 aa14.69□□□□□ -0.06
CUX1-214ENST00000550008 MIR1-1HGQ9H1L0 117 aa14.69□□□□□ -0.06
CUX1-214ENST00000550008 RAB26Q9ULW5 256 aa14.69□□□□□ -0.06
CUX1-214ENST00000550008 KLHL20Q9Y2M5 609 aa14.69□□□□□ -0.06
CUX1-214ENST00000550008 OR1F1O43749 312 aa14.69□□□□□ -0.06
CUX1-214ENST00000550008 SLC28A2O43868 658 aa14.69□□□□□ -0.06
CUX1-214ENST00000550008 C8GP07360 202 aa14.69□□□□□ -0.06
CUX1-214ENST00000550008 ACP5P13686 325 aa14.69□□□□□ -0.06
CUX1-214ENST00000550008 ATP1B2P14415 290 aaPredicted RBP14.69□□□□□ -0.06
CUX1-214ENST00000550008 HPGDP15428 266 aa14.69□□□□□ -0.06
CUX1-214ENST00000550008 PRDX3P30048 256 aaKnown RBP14.69□□□□□ -0.06
CUX1-214ENST00000550008 VITQ6UXI7 678 aa14.69□□□□□ -0.06
CUX1-214ENST00000550008 RTN4RL1Q86UN2 441 aaPredicted RBP14.69□□□□□ -0.06
CUX1-214ENST00000550008 HID1Q8IV36 788 aa14.69□□□□□ -0.06
CUX1-214ENST00000550008 C1orf52Q8N6N3 182 aaKnown RBP14.69□□□□□ -0.06
CUX1-214ENST00000550008 SLC32A1Q9H598 525 aa14.69□□□□□ -0.06
CUX1-214ENST00000550008 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP14.69□□□□□ -0.064e-11■■■■■ 28.6
CUX1-214ENST00000550008 TMEM98Q9Y2Y6 226 aa14.69□□□□□ -0.06
CUX1-214ENST00000550008 LYVE1Q9Y5Y7 322 aa14.69□□□□□ -0.06
CUX1-214ENST00000550008 THSD7AQ9UPZ6 1657 aa14.69□□□□□ -0.06
CUX1-214ENST00000550008 A0A1W2PP18 115 aa14.69□□□□□ -0.06
CUX1-214ENST00000550008 ITGBL1O95965 494 aaPredicted RBP14.69□□□□□ -0.06
CUX1-214ENST00000550008 DNAJB13P59910 316 aa14.69□□□□□ -0.06
CUX1-214ENST00000550008 ZDHHC20Q5W0Z9 365 aa14.69□□□□□ -0.06
CUX1-214ENST00000550008 UTS2BQ765I0 119 aa14.69□□□□□ -0.06
CUX1-214ENST00000550008 QRFPRQ96P65 431 aa14.69□□□□□ -0.06
CUX1-214ENST00000550008 LINC00597Q9H2U6 94 aa14.69□□□□□ -0.06
CUX1-214ENST00000550008 AASDHPPTQ9NRN7 309 aa14.69□□□□□ -0.06
CUX1-214ENST00000550008 DHRS7Q9Y394 339 aa14.69□□□□□ -0.06
CUX1-214ENST00000550008 LRRC42Q9Y546 428 aa14.69□□□□□ -0.06
CUX1-214ENST00000550008 TNKS1BP1Q9C0C2 1729 aaKnown RBP14.68□□□□□ -0.06
CUX1-214ENST00000550008 MUSKO15146 869 aa14.68□□□□□ -0.06
CUX1-214ENST00000550008 GNRH1P01148 92 aa14.68□□□□□ -0.06
CUX1-214ENST00000550008 RHOP08100 348 aa14.68□□□□□ -0.06
CUX1-214ENST00000550008 RHDQ02161 417 aa14.68□□□□□ -0.06
CUX1-214ENST00000550008 PERM1Q5SV97 790 aa14.68□□□□□ -0.06
CUX1-214ENST00000550008 FRG2Q64ET8 278 aa14.68□□□□□ -0.06
CUX1-214ENST00000550008 PDE12Q6L8Q7 609 aaKnown RBP14.68□□□□□ -0.06
CUX1-214ENST00000550008 PAGE2Q7Z2X7 111 aa14.68□□□□□ -0.06
CUX1-214ENST00000550008 GATAD2AQ86YP4 633 aa14.68□□□□□ -0.06
CUX1-214ENST00000550008 PHF12Q96QT6 1004 aa14.68□□□□□ -0.06
CUX1-214ENST00000550008 FRG2BQ96QU4 278 aa14.68□□□□□ -0.06
CUX1-214ENST00000550008 PHPT1Q9NRX4 125 aaPredicted RBP14.68□□□□□ -0.06
CUX1-214ENST00000550008 IGSF5Q9NSI5 407 aa14.68□□□□□ -0.06
CUX1-214ENST00000550008 HMX2A2RU54 273 aa14.68□□□□□ -0.06
CUX1-214ENST00000550008 MAGEB17A8MXT2 336 aa14.68□□□□□ -0.06
CUX1-214ENST00000550008 BCAS2O75934 225 aaPredicted RBP14.68□□□□□ -0.06
CUX1-214ENST00000550008 PRKACGP22612 351 aa14.68□□□□□ -0.06
CUX1-214ENST00000550008 IGFBP5P24593 272 aa14.68□□□□□ -0.06
CUX1-214ENST00000550008 SLBPQ14493 270 aaKnown RBP eCLIP14.68□□□□□ -0.06
CUX1-214ENST00000550008 TNFAIP8L2Q6P589 184 aaPredicted RBP14.68□□□□□ -0.06
CUX1-214ENST00000550008 KRT73Q86Y46 540 aa14.68□□□□□ -0.06
CUX1-214ENST00000550008 ZDHHC21Q8IVQ6 265 aa14.68□□□□□ -0.06
CUX1-214ENST00000550008 ARL10Q8N8L6 244 aa14.68□□□□□ -0.06
CUX1-214ENST00000550008 SLC22A12Q96S37 553 aa14.68□□□□□ -0.06
CUX1-214ENST00000550008 PLAGL1Q9UM63 463 aa14.68□□□□□ -0.06
CUX1-214ENST00000550008 AP3M1Q9Y2T2 418 aa14.68□□□□□ -0.06
CUX1-214ENST00000550008 TGM5O43548 720 aa14.68□□□□□ -0.06
CUX1-214ENST00000550008 TPST2O60704 377 aa14.68□□□□□ -0.06
CUX1-214ENST00000550008 PGRP06401 933 aa14.68□□□□□ -0.06
CUX1-214ENST00000550008 DBTP11182 482 aaKnown RBP14.68□□□□□ -0.06
CUX1-214ENST00000550008 ATF6P18850 670 aa14.68□□□□□ -0.06
CUX1-214ENST00000550008 SERPINB1P30740 379 aa14.68□□□□□ -0.06
CUX1-214ENST00000550008 CCR4P51679 360 aa14.68□□□□□ -0.06
CUX1-214ENST00000550008 FPGSQ05932 587 aa14.68□□□□□ -0.06
CUX1-214ENST00000550008 ITGADQ13349 1161 aa14.68□□□□□ -0.06
CUX1-214ENST00000550008 ATP13A5Q4VNC0 1218 aa14.68□□□□□ -0.06
CUX1-214ENST00000550008 C9orf64Q5T6V5 341 aa14.68□□□□□ -0.06
CUX1-214ENST00000550008 OR13J1Q8NGT2 312 aa14.68□□□□□ -0.06
CUX1-214ENST00000550008 IRF7Q92985 503 aa14.68□□□□□ -0.06
CUX1-214ENST00000550008 PLEKHG4BQ96PX9 1271 aa14.68□□□□□ -0.06
CUX1-214ENST00000550008 ELAC1Q9H777 363 aaKnown RBP14.68□□□□□ -0.06
CUX1-214ENST00000550008 INTS7Q9NVH2 962 aaKnown RBP14.68□□□□□ -0.06
CUX1-214ENST00000550008 PCDHGA11Q9Y5H2 935 aa14.68□□□□□ -0.06
CUX1-214ENST00000550008 SSC5DA1L4H1 1573 aa14.67□□□□□ -0.06
CUX1-214ENST00000550008 DYTNA2CJ06 578 aa14.67□□□□□ -0.06
CUX1-214ENST00000550008 HHLA1C9JL84 531 aa14.67□□□□□ -0.06
CUX1-214ENST00000550008 APODP05090 189 aa14.67□□□□□ -0.06
CUX1-214ENST00000550008 ALDH4A1P30038 563 aa14.67□□□□□ -0.06
CUX1-214ENST00000550008 APLP1P51693 650 aa14.67□□□□□ -0.06
CUX1-214ENST00000550008 MAPK12P53778 367 aa14.67□□□□□ -0.06
CUX1-214ENST00000550008 GPM6BQ13491 265 aa14.67□□□□□ -0.06
CUX1-214ENST00000550008 KRTCAP2Q8N6L1 136 aa14.67□□□□□ -0.06
CUX1-214ENST00000550008 ENDOVQ8N8Q3 282 aaKnown RBP14.67□□□□□ -0.06
CUX1-214ENST00000550008 CHST14Q8NCH0 376 aa14.67□□□□□ -0.06
CUX1-214ENST00000550008 CASD1Q96PB1 797 aa14.67□□□□□ -0.06
CUX1-214ENST00000550008 HTATIP2Q9BUP3 242 aa14.67□□□□□ -0.06
CUX1-214ENST00000550008 OR51B5Q9H339 312 aa14.67□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms