RNA–Protein interactions for RNA: ENST00000549271.1

DDX54-206, Transcript of DEAD-box helicase 54, humanhuman

TSL 2

Gene DDX54, Length 756 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-206ENST00000549271 TUBB2AQ13885 445 aa11.82□□□□□ -0.52
DDX54-206ENST00000549271 NFE2L1Q14494 772 aa11.82□□□□□ -0.52
DDX54-206ENST00000549271 SPARCL1Q14515 664 aa11.82□□□□□ -0.52
DDX54-206ENST00000549271 LONRF2Q1L5Z9 754 aa11.82□□□□□ -0.52
DDX54-206ENST00000549271 ZNF630Q2M218 657 aaPredicted RBP11.82□□□□□ -0.52
DDX54-206ENST00000549271 DNTTIP2Q5QJE6 756 aaKnown RBP11.82□□□□□ -0.52
DDX54-206ENST00000549271 MEI1Q5TIA1 1274 aa11.82□□□□□ -0.52
DDX54-206ENST00000549271 KCTD11Q693B1 232 aa11.82□□□□□ -0.52
DDX54-206ENST00000549271 FAM198BQ6UWH4 519 aa11.82□□□□□ -0.52
DDX54-206ENST00000549271 FAM151BQ6UXP7 276 aa11.82□□□□□ -0.52
DDX54-206ENST00000549271 BNC2Q6ZN30 1099 aaPredicted RBP11.82□□□□□ -0.52
DDX54-206ENST00000549271 ZNF662Q6ZS27 426 aa11.82□□□□□ -0.52
DDX54-206ENST00000549271 GLT6D1Q7Z4J2 308 aa11.82□□□□□ -0.52
DDX54-206ENST00000549271 ZADH2Q8N4Q0 377 aa11.82□□□□□ -0.52
DDX54-206ENST00000549271 OR2L2Q8NH16 312 aa11.82□□□□□ -0.52
DDX54-206ENST00000549271 ZNF398Q8TD17 642 aa11.82□□□□□ -0.52
DDX54-206ENST00000549271 GRHL3Q8TE85 626 aa11.82□□□□□ -0.52
DDX54-206ENST00000549271 TM9SF4Q92544 642 aa11.82□□□□□ -0.52
DDX54-206ENST00000549271 LINC00615Q96LM1 132 aaPredicted RBP11.82□□□□□ -0.52
DDX54-206ENST00000549271 C19orf43Q9BQ61 176 aa11.82□□□□□ -0.52
DDX54-206ENST00000549271 TUBB2BQ9BVA1 445 aa11.82□□□□□ -0.52
DDX54-206ENST00000549271 FSD1LQ9BXM9 530 aa11.82□□□□□ -0.52
DDX54-206ENST00000549271 TSGA10Q9BZW7 698 aa11.82□□□□□ -0.52
DDX54-206ENST00000549271 ARNT2Q9HBZ2 717 aa11.82□□□□□ -0.52
DDX54-206ENST00000549271 ZBTB20Q9HC78 741 aaPredicted RBP11.82□□□□□ -0.52
DDX54-206ENST00000549271 CHST11Q9NPF2 352 aa11.82□□□□□ -0.52
DDX54-206ENST00000549271 KCND1Q9NSA2 647 aa11.82□□□□□ -0.52
DDX54-206ENST00000549271 HRASLS2Q9NWW9 162 aa11.82□□□□□ -0.52
DDX54-206ENST00000549271 PKP3Q9Y446 797 aa11.82□□□□□ -0.52
DDX54-206ENST00000549271 ARL5AQ9Y689 179 aa11.82□□□□□ -0.52
DDX54-206ENST00000549271 MAP1AP78559 2803 aaPredicted RBP11.81□□□□□ -0.52
DDX54-206ENST00000549271 AGAP14A8MT82 685 aa11.81□□□□□ -0.52
DDX54-206ENST00000549271 GPR39O43194 453 aa11.81□□□□□ -0.52
DDX54-206ENST00000549271 KLHL41O60662 606 aa11.81□□□□□ -0.52
DDX54-206ENST00000549271 ZBTB11O95625 1053 aaPredicted RBP11.81□□□□□ -0.52
DDX54-206ENST00000549271 ARL4DP49703 201 aa11.81□□□□□ -0.52
DDX54-206ENST00000549271 SOX8P57073 446 aa11.81□□□□□ -0.52
DDX54-206ENST00000549271 KRTAP10-9P60411 292 aa11.81□□□□□ -0.52
DDX54-206ENST00000549271 CCZ1BP86790 482 aa11.81□□□□□ -0.52
DDX54-206ENST00000549271 CCZ1P86791 482 aaPredicted RBP11.81□□□□□ -0.52
DDX54-206ENST00000549271 PRPSAP1Q14558 356 aa11.81□□□□□ -0.52
DDX54-206ENST00000549271 PLCL1Q15111 1095 aa11.81□□□□□ -0.52
DDX54-206ENST00000549271 TAF1AQ15573 450 aaPredicted RBP11.81□□□□□ -0.52
DDX54-206ENST00000549271 PARP6Q2NL67 630 aa11.81□□□□□ -0.52
DDX54-206ENST00000549271 BCL7AQ4VC05 210 aa11.81□□□□□ -0.52
DDX54-206ENST00000549271 MRGPREQ86SM8 312 aa11.81□□□□□ -0.52
DDX54-206ENST00000549271 OOSP2Q86WS3 158 aa11.81□□□□□ -0.52
DDX54-206ENST00000549271 RAB43Q86YS6 212 aa11.81□□□□□ -0.52
DDX54-206ENST00000549271 MMP21Q8N119 569 aa11.81□□□□□ -0.52
DDX54-206ENST00000549271 NXPE1Q8N323 547 aa11.81□□□□□ -0.52
DDX54-206ENST00000549271 GALNT16Q8N428 558 aa11.81□□□□□ -0.52
DDX54-206ENST00000549271 OR4K2Q8NGD2 314 aa11.81□□□□□ -0.52
DDX54-206ENST00000549271 FAR1Q8WVX9 515 aa11.81□□□□□ -0.52
DDX54-206ENST00000549271 ATG4AQ8WYN0 398 aa11.81□□□□□ -0.52
DDX54-206ENST00000549271 INSM2Q96T92 566 aaPredicted RBP11.81□□□□□ -0.52
DDX54-206ENST00000549271 TBL1YQ9BQ87 522 aa11.81□□□□□ -0.52
DDX54-206ENST00000549271 TMEM121Q9BTD3 319 aa11.81□□□□□ -0.52
DDX54-206ENST00000549271 KIR3DX1Q9H7L2 352 aa11.81□□□□□ -0.52
DDX54-206ENST00000549271 IMP3Q9NV31 184 aaKnown RBP11.81□□□□□ -0.52
DDX54-206ENST00000549271 SLC24A2Q9UI40 661 aa11.81□□□□□ -0.52
DDX54-206ENST00000549271 PSMD13Q9UNM6 376 aa11.81□□□□□ -0.52
DDX54-206ENST00000549271 BTRCQ9Y297 605 aa11.81□□□□□ -0.52
DDX54-206ENST00000549271 CSAG2Q9Y5P2 127 aa11.81□□□□□ -0.52
DDX54-206ENST00000549271 ANKRD12Q6UB98 2062 aa11.8□□□□□ -0.52
DDX54-206ENST00000549271 UBA6A0AVT1 1052 aaPredicted RBP11.8□□□□□ -0.52
DDX54-206ENST00000549271 OR2AG2A6NM03 316 aa11.8□□□□□ -0.52
DDX54-206ENST00000549271 STX7O15400 261 aaKnown RBP11.8□□□□□ -0.52
DDX54-206ENST00000549271 PRICKLE3O43900 615 aaPredicted RBP11.8□□□□□ -0.52
DDX54-206ENST00000549271 ZNF189O75820 626 aaPredicted RBP11.8□□□□□ -0.52
DDX54-206ENST00000549271 MSL3P1P0C860 447 aa11.8□□□□□ -0.52
DDX54-206ENST00000549271 MSH3P20585 1137 aa11.8□□□□□ -0.52
DDX54-206ENST00000549271 CAPN3P20807 821 aa11.8□□□□□ -0.52
DDX54-206ENST00000549271 NDUFS1P28331 727 aa11.8□□□□□ -0.52
DDX54-206ENST00000549271 HTR1EP28566 365 aa11.8□□□□□ -0.52
DDX54-206ENST00000549271 SSTR2P30874 369 aa11.8□□□□□ -0.52
DDX54-206ENST00000549271 TSFMP43897 325 aaKnown RBP11.8□□□□□ -0.52
DDX54-206ENST00000549271 XIAPP98170 497 aa11.8□□□□□ -0.52
DDX54-206ENST00000549271 OASLQ15646 514 aaKnown RBP11.8□□□□□ -0.52
DDX54-206ENST00000549271 GPR19Q15760 415 aa11.8□□□□□ -0.52
DDX54-206ENST00000549271 DCAF10Q5QP82 559 aa11.8□□□□□ -0.52
DDX54-206ENST00000549271 FNBP1LQ5T0N5 605 aa11.8□□□□□ -0.52
DDX54-206ENST00000549271 TMTC4Q5T4D3 741 aa11.8□□□□□ -0.52
DDX54-206ENST00000549271 PRAMEF17Q5VTA0 474 aa11.8□□□□□ -0.52
DDX54-206ENST00000549271 SLC13A5Q86YT5 568 aaPredicted RBP11.8□□□□□ -0.52
DDX54-206ENST00000549271 CPT1BQ92523 772 aa11.8□□□□□ -0.52
DDX54-206ENST00000549271 C12orf66Q96MD2 445 aa11.8□□□□□ -0.52
DDX54-206ENST00000549271 PPP1R2P1Q96PQ5 205 aa11.8□□□□□ -0.52
DDX54-206ENST00000549271 SLX1AQ9BQ83 275 aa11.8□□□□□ -0.52
DDX54-206ENST00000549271 WWP1Q9H0M0 922 aa11.8□□□□□ -0.52
DDX54-206ENST00000549271 SYTL2Q9HCH5 934 aa11.8□□□□□ -0.52
DDX54-206ENST00000549271 LZTFL1Q9NQ48 299 aa11.8□□□□□ -0.52
DDX54-206ENST00000549271 NOVA2Q9UNW9 492 aaKnown RBP11.8□□□□□ -0.52
DDX54-206ENST00000549271 COLEC10Q9Y6Z7 277 aa11.8□□□□□ -0.52
DDX54-206ENST00000549271 C2orf81A6NN90 581 aa11.79□□□□□ -0.52
DDX54-206ENST00000549271 MATN2O00339 956 aa11.79□□□□□ -0.52
DDX54-206ENST00000549271 LDB2O43679 373 aa11.79□□□□□ -0.52
DDX54-206ENST00000549271 SGTAO43765 313 aa11.79□□□□□ -0.52
DDX54-206ENST00000549271 LIASO43766 372 aa11.79□□□□□ -0.52
DDX54-206ENST00000549271 SRP72O76094 671 aaKnown RBP11.79□□□□□ -0.52
DDX54-206ENST00000549271 PRAMEF1O95521 474 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms