RNA–Protein interactions for RNA: ENST00000546849.1

NPAS3-204, Transcript of neuronal PAS domain protein 3, humanhuman

TSL 3

Gene NPAS3, Length 464 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-204ENST00000546849 RBPMS2Q6ZRY4 209 aaKnown RBP5.73□□□□□ -1.49
NPAS3-204ENST00000546849 SLC26A9Q7LBE3 791 aa5.73□□□□□ -1.49
NPAS3-204ENST00000546849 TRMT1LQ7Z2T5 733 aaKnown RBP5.73□□□□□ -1.49
NPAS3-204ENST00000546849 ADCK2Q7Z695 626 aa5.73□□□□□ -1.49
NPAS3-204ENST00000546849 DNAJC22Q8N4W6 341 aa5.73□□□□□ -1.49
NPAS3-204ENST00000546849 PI4KAP1Q8N8J0 262 aa5.73□□□□□ -1.49
NPAS3-204ENST00000546849 CAMKVQ8NCB2 501 aa5.73□□□□□ -1.49
NPAS3-204ENST00000546849 KIF18AQ8NI77 898 aa5.73□□□□□ -1.49
NPAS3-204ENST00000546849 ARSGQ96EG1 525 aa5.73□□□□□ -1.49
NPAS3-204ENST00000546849 SGK494Q96LW2 274 aa5.73□□□□□ -1.49
NPAS3-204ENST00000546849 C17orf77Q96MU5 243 aa5.73□□□□□ -1.49
NPAS3-204ENST00000546849 MYADMQ96S97 322 aa5.73□□□□□ -1.49
NPAS3-204ENST00000546849 PKP4Q99569 1192 aa5.73□□□□□ -1.49
NPAS3-204ENST00000546849 BTBD10Q9BSF8 475 aa5.73□□□□□ -1.49
NPAS3-204ENST00000546849 NAA11Q9BSU3 229 aaPredicted RBP5.73□□□□□ -1.49
NPAS3-204ENST00000546849 GPR88Q9GZN0 384 aa5.73□□□□□ -1.49
NPAS3-204ENST00000546849 ZNF556Q9HAH1 456 aa5.73□□□□□ -1.49
NPAS3-204ENST00000546849 C5AR2Q9P296 337 aa5.73□□□□□ -1.49
NPAS3-204ENST00000546849 PCF11O94913 1555 aaKnown RBP5.72□□□□□ -1.49
NPAS3-204ENST00000546849 SRCAPQ6ZRS2 3230 aa5.72□□□□□ -1.49
NPAS3-204ENST00000546849 TNFSF12-TNFSF13A0A0A6YY99 330 aa5.72□□□□□ -1.49
NPAS3-204ENST00000546849 C5orf60A6NFR6 353 aa5.72□□□□□ -1.49
NPAS3-204ENST00000546849 GAPDHSO14556 408 aaPredicted RBP5.72□□□□□ -1.49
NPAS3-204ENST00000546849 PRSS1P07477 247 aa5.72□□□□□ -1.49
NPAS3-204ENST00000546849 RAB40ALP0C0E4 278 aa5.72□□□□□ -1.49
NPAS3-204ENST00000546849 MSH3P20585 1137 aa5.72□□□□□ -1.49
NPAS3-204ENST00000546849 PNRC1Q12796 327 aaPredicted RBP5.72□□□□□ -1.49
NPAS3-204ENST00000546849 TAF13Q15543 124 aa5.72□□□□□ -1.49
NPAS3-204ENST00000546849 VWC2Q2TAL6 325 aa5.72□□□□□ -1.49
NPAS3-204ENST00000546849 CCNYL2Q5T2Q4 361 aa5.72□□□□□ -1.49
NPAS3-204ENST00000546849 MFSD12Q6NUT3 480 aa5.72□□□□□ -1.49
NPAS3-204ENST00000546849 ZNF554Q86TJ5 538 aa5.72□□□□□ -1.49
NPAS3-204ENST00000546849 VSIG1Q86XK7 387 aa5.72□□□□□ -1.49
NPAS3-204ENST00000546849 CDK20Q8IZL9 346 aa5.72□□□□□ -1.49
NPAS3-204ENST00000546849 SSMEM1Q8WWF3 244 aa5.72□□□□□ -1.49
NPAS3-204ENST00000546849 ROBO4Q8WZ75 1007 aa5.72□□□□□ -1.49
NPAS3-204ENST00000546849 MOB3AQ96BX8 217 aa5.72□□□□□ -1.49
NPAS3-204ENST00000546849 LINC00615Q96LM1 132 aaPredicted RBP5.72□□□□□ -1.49
NPAS3-204ENST00000546849 SPAG5Q96R06 1193 aa5.72□□□□□ -1.49
NPAS3-204ENST00000546849 SLC25A23Q9BV35 468 aa5.72□□□□□ -1.49
NPAS3-204ENST00000546849 ANKRD2Q9GZV1 360 aa5.72□□□□□ -1.49
NPAS3-204ENST00000546849 MIS12Q9H081 205 aa5.72□□□□□ -1.49
NPAS3-204ENST00000546849 BICC1Q9H694 974 aaKnown RBP5.72□□□□□ -1.49
NPAS3-204ENST00000546849 GKN1Q9NS71 199 aa5.72□□□□□ -1.49
NPAS3-204ENST00000546849 PRMT7Q9NVM4 692 aaPredicted RBP5.72□□□□□ -1.49
NPAS3-204ENST00000546849 GIMAP2Q9UG22 337 aa5.72□□□□□ -1.49
NPAS3-204ENST00000546849 TUBE1Q9UJT0 475 aa5.72□□□□□ -1.49
NPAS3-204ENST00000546849 EFCAB5A4FU69 1503 aa5.72□□□□□ -1.49
NPAS3-204ENST00000546849 CARMIL1Q5VZK9 1371 aa5.71□□□□□ -1.5
NPAS3-204ENST00000546849 TRIM77I1YAP6 450 aa5.71□□□□□ -1.5
NPAS3-204ENST00000546849 LMX1BO60663 402 aa5.71□□□□□ -1.5
NPAS3-204ENST00000546849 CELF2O95319 508 aaKnown RBP5.71□□□□□ -1.5
NPAS3-204ENST00000546849 HSPA4LO95757 839 aa5.71□□□□□ -1.5
NPAS3-204ENST00000546849 QDPRP09417 244 aa5.71□□□□□ -1.5
NPAS3-204ENST00000546849 DANCRP0C864 163 aa5.71□□□□□ -1.5
NPAS3-204ENST00000546849 ACHEP22303 614 aa5.71□□□□□ -1.5
NPAS3-204ENST00000546849 CCR10P46092 362 aa5.71□□□□□ -1.5
NPAS3-204ENST00000546849 ZNF41P51814 821 aaPredicted RBP5.71□□□□□ -1.5
NPAS3-204ENST00000546849 RBPJQ06330 500 aa5.71□□□□□ -1.5
NPAS3-204ENST00000546849 DMPKQ09013 629 aa5.71□□□□□ -1.5
NPAS3-204ENST00000546849 THNSL1Q8IYQ7 743 aa5.71□□□□□ -1.5
NPAS3-204ENST00000546849 ARHGAP24Q8N264 748 aa5.71□□□□□ -1.5
NPAS3-204ENST00000546849 IQUBQ8NA54 791 aa5.71□□□□□ -1.5
NPAS3-204ENST00000546849 OR2T12Q8NG77 320 aa5.71□□□□□ -1.5
NPAS3-204ENST00000546849 THOC1Q96FV9 657 aaKnown RBP5.71□□□□□ -1.5
NPAS3-204ENST00000546849 ZMAT2Q96NC0 199 aaKnown RBP5.71□□□□□ -1.5
NPAS3-204ENST00000546849 INPP4AQ96PE3 977 aaPredicted RBP5.71□□□□□ -1.5
NPAS3-204ENST00000546849 PSD2Q9BQI7 771 aa5.71□□□□□ -1.5
NPAS3-204ENST00000546849 VN1R1Q9GZP7 353 aa5.71□□□□□ -1.5
NPAS3-204ENST00000546849 ABT1Q9ULW3 272 aaKnown RBP5.71□□□□□ -1.5
NPAS3-204ENST00000546849 FMN1Q68DA7 1419 aa5.71□□□□□ -1.5
NPAS3-204ENST00000546849 SNAPC4Q5SXM2 1469 aa5.71□□□□□ -1.5
NPAS3-204ENST00000546849 CCNB3Q8WWL7 1395 aa5.7□□□□□ -1.5
NPAS3-204ENST00000546849 ARHGEF37A1IGU5 675 aa5.7□□□□□ -1.5
NPAS3-204ENST00000546849 PRSS44E7EML9 344 aa5.7□□□□□ -1.5
NPAS3-204ENST00000546849 CLDN4O14493 209 aa5.7□□□□□ -1.5
NPAS3-204ENST00000546849 PRKNO60260 465 aaPredicted RBP5.7□□□□□ -1.5
NPAS3-204ENST00000546849 TOMM70O94826 608 aa5.7□□□□□ -1.5
NPAS3-204ENST00000546849 FGF5P12034 268 aa5.7□□□□□ -1.5
NPAS3-204ENST00000546849 HOXB6P17509 224 aaKnown RBP5.7□□□□□ -1.5
NPAS3-204ENST00000546849 MAPK12P53778 367 aa5.7□□□□□ -1.5
NPAS3-204ENST00000546849 ZRSR1Q15695 479 aaKnown RBP5.7□□□□□ -1.5
NPAS3-204ENST00000546849 KLHL26Q53HC5 615 aa5.7□□□□□ -1.5
NPAS3-204ENST00000546849 SPECC1Q5M775 1068 aa5.7□□□□□ -1.5
NPAS3-204ENST00000546849 STPG1Q5TH74 334 aa5.7□□□□□ -1.5
NPAS3-204ENST00000546849 C11orf63Q6NUN7 778 aa5.7□□□□□ -1.5
NPAS3-204ENST00000546849 LINGO4Q6UY18 593 aa5.7□□□□□ -1.5
NPAS3-204ENST00000546849 PPP1R21Q6ZMI0 780 aa5.7□□□□□ -1.5
NPAS3-204ENST00000546849 C18orf65Q6ZTR6 163 aa5.7□□□□□ -1.5
NPAS3-204ENST00000546849 ERN2Q76MJ5 926 aaKnown RBP5.7□□□□□ -1.5
NPAS3-204ENST00000546849 ARHGAP22Q7Z5H3 698 aa5.7□□□□□ -1.5
NPAS3-204ENST00000546849 CEP57L1Q8IYX8 460 aa5.7□□□□□ -1.5
NPAS3-204ENST00000546849 ZNF611Q8N823 705 aa5.7□□□□□ -1.5
NPAS3-204ENST00000546849 TRIML1Q8N9V2 468 aa5.7□□□□□ -1.5
NPAS3-204ENST00000546849 OR1J1Q8NGS3 322 aa5.7□□□□□ -1.5
NPAS3-204ENST00000546849 SETD6Q8TBK2 473 aa5.7□□□□□ -1.5
NPAS3-204ENST00000546849 TM9SF4Q92544 642 aa5.7□□□□□ -1.5
NPAS3-204ENST00000546849 UHRF2Q96PU4 802 aa5.7□□□□□ -1.5
NPAS3-204ENST00000546849 FERMT1Q9BQL6 677 aa5.7□□□□□ -1.5
NPAS3-204ENST00000546849 RTP3Q9BQQ7 232 aa5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms