RNA–Protein interactions for RNA: ENST00000546164.5

YBX3-217, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 805 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-217ENST00000546164 ATP1A2P50993 1020 aa11.51□□□□□ -0.57
YBX3-217ENST00000546164 CSE1LP55060 971 aaKnown RBP11.51□□□□□ -0.57
YBX3-217ENST00000546164 HSD11B2P80365 405 aa11.51□□□□□ -0.57
YBX3-217ENST00000546164 ACY1Q03154 408 aa11.51□□□□□ -0.57
YBX3-217ENST00000546164 FOXM1Q08050 763 aa11.51□□□□□ -0.57
YBX3-217ENST00000546164 VAC14Q08AM6 782 aa11.51□□□□□ -0.57
YBX3-217ENST00000546164 MAP7Q14244 749 aa11.51□□□□□ -0.57
YBX3-217ENST00000546164 LARP7Q4G0J3 582 aaKnown RBP eCLIP11.51□□□□□ -0.57
YBX3-217ENST00000546164 ZNF789Q5FWF6 425 aa11.51□□□□□ -0.57
YBX3-217ENST00000546164 SPANXN3Q5MJ09 141 aa11.51□□□□□ -0.57
YBX3-217ENST00000546164 INO80CQ6PI98 192 aaPredicted RBP11.51□□□□□ -0.57
YBX3-217ENST00000546164 UNC5AQ6ZN44 842 aa11.51□□□□□ -0.57
YBX3-217ENST00000546164 GPR155Q7Z3F1 870 aa11.51□□□□□ -0.57
YBX3-217ENST00000546164 ZNF572Q7Z3I7 529 aaPredicted RBP11.51□□□□□ -0.57
YBX3-217ENST00000546164 MAATS1Q7Z4T9 603 aa11.51□□□□□ -0.57
YBX3-217ENST00000546164 DENND6AQ8IWF6 608 aa11.51□□□□□ -0.57
YBX3-217ENST00000546164 SIDT2Q8NBJ9 832 aaKnown RBP11.51□□□□□ -0.57
YBX3-217ENST00000546164 KCNJ9Q92806 393 aa11.51□□□□□ -0.57
YBX3-217ENST00000546164 NKD1Q969G9 470 aa11.51□□□□□ -0.57
YBX3-217ENST00000546164 FCRL4Q96PJ5 515 aa11.51□□□□□ -0.57
YBX3-217ENST00000546164 CTRCQ99895 268 aa11.51□□□□□ -0.57
YBX3-217ENST00000546164 FAM167BQ9BTA0 163 aa11.51□□□□□ -0.57
YBX3-217ENST00000546164 MENTQ9BUN1 341 aa11.51□□□□□ -0.57
YBX3-217ENST00000546164 CRYL1Q9Y2S2 319 aa11.51□□□□□ -0.57
YBX3-217ENST00000546164 MRFAP1Q9Y605 127 aa11.51□□□□□ -0.57
YBX3-217ENST00000546164 ATMQ13315 3056 aa11.5□□□□□ -0.57
YBX3-217ENST00000546164 TEX51A0A1B0GUA7 166 aa11.5□□□□□ -0.57
YBX3-217ENST00000546164 PIPSLA2A3N6 862 aa11.5□□□□□ -0.57
YBX3-217ENST00000546164 GSAPA4D1B5 854 aa11.5□□□□□ -0.57
YBX3-217ENST00000546164 EFCAB8A8MWE9 144 aa11.5□□□□□ -0.57
YBX3-217ENST00000546164 E7ESA3 106 aa11.5□□□□□ -0.57
YBX3-217ENST00000546164 EFSO43281 561 aa11.5□□□□□ -0.57
YBX3-217ENST00000546164 RAD1O60671 282 aa11.5□□□□□ -0.57
YBX3-217ENST00000546164 STK17BO94768 372 aa11.5□□□□□ -0.57
YBX3-217ENST00000546164 FOLR1P15328 257 aa11.5□□□□□ -0.57
YBX3-217ENST00000546164 MAP4P27816 1152 aaKnown RBP11.5□□□□□ -0.57
YBX3-217ENST00000546164 SLC1A2P43004 574 aa11.5□□□□□ -0.57
YBX3-217ENST00000546164 ARL4DP49703 201 aa11.5□□□□□ -0.57
YBX3-217ENST00000546164 RAB28P51157 221 aa11.5□□□□□ -0.57
YBX3-217ENST00000546164 ITGA8P53708 1063 aa11.5□□□□□ -0.57
YBX3-217ENST00000546164 CXADRP78310 365 aa11.5□□□□□ -0.57
YBX3-217ENST00000546164 ABRQ12979 859 aa11.5□□□□□ -0.57
YBX3-217ENST00000546164 CTBP1Q13363 440 aa11.5□□□□□ -0.57
YBX3-217ENST00000546164 PDAP1Q13442 181 aaKnown RBP11.5□□□□□ -0.57
YBX3-217ENST00000546164 FRG1Q14331 258 aaKnown RBP11.5□□□□□ -0.57
YBX3-217ENST00000546164 GRB7Q14451 532 aa11.5□□□□□ -0.57
YBX3-217ENST00000546164 HIF1AQ16665 826 aa11.5□□□□□ -0.57
YBX3-217ENST00000546164 KYNUQ16719 465 aa11.5□□□□□ -0.57
YBX3-217ENST00000546164 BBS9Q3SYG4 887 aa11.5□□□□□ -0.57
YBX3-217ENST00000546164 HSP90AA5PQ58FG0 334 aa11.5□□□□□ -0.57
YBX3-217ENST00000546164 KIAA0408Q6ZU52 694 aa11.5□□□□□ -0.57
YBX3-217ENST00000546164 KCNMB4Q86W47 210 aa11.5□□□□□ -0.57
YBX3-217ENST00000546164 IGDCC3Q8IVU1 814 aa11.5□□□□□ -0.57
YBX3-217ENST00000546164 CNTN4Q8IWV2 1026 aa11.5□□□□□ -0.57
YBX3-217ENST00000546164 ZBTB2Q8N680 514 aa11.5□□□□□ -0.57
YBX3-217ENST00000546164 BBOF1Q8ND07 529 aa11.5□□□□□ -0.57
YBX3-217ENST00000546164 GABPB2Q8TAK5 448 aaPredicted RBP11.5□□□□□ -0.57
YBX3-217ENST00000546164 GSDMBQ8TAX9 411 aa11.5□□□□□ -0.57
YBX3-217ENST00000546164 PPM1MQ96MI6 270 aa11.5□□□□□ -0.57
YBX3-217ENST00000546164 NRTNQ99748 197 aa11.5□□□□□ -0.57
YBX3-217ENST00000546164 WDR83Q9BRX9 315 aaKnown RBP11.5□□□□□ -0.57
YBX3-217ENST00000546164 ERP44Q9BS26 406 aa11.5□□□□□ -0.57
YBX3-217ENST00000546164 CHRNA10Q9GZZ6 450 aa11.5□□□□□ -0.57
YBX3-217ENST00000546164 XKR8Q9H6D3 395 aa11.5□□□□□ -0.57
YBX3-217ENST00000546164 PLAC1Q9HBJ0 212 aa11.5□□□□□ -0.57
YBX3-217ENST00000546164 CPNE5Q9HCH3 593 aa11.5□□□□□ -0.57
YBX3-217ENST00000546164 SYTL2Q9HCH5 934 aa11.5□□□□□ -0.57
YBX3-217ENST00000546164 PDE7BQ9NP56 450 aa11.5□□□□□ -0.57
YBX3-217ENST00000546164 ACTR10Q9NZ32 417 aa11.5□□□□□ -0.57
YBX3-217ENST00000546164 FBXO5Q9UKT4 447 aa11.5□□□□□ -0.57
YBX3-217ENST00000546164 TDRKHQ9Y2W6 561 aaKnown RBP11.5□□□□□ -0.57
YBX3-217ENST00000546164 MED16Q9Y2X0 877 aa11.5□□□□□ -0.57
YBX3-217ENST00000546164 COMMD10Q9Y6G5 202 aa11.5□□□□□ -0.57
YBX3-217ENST00000546164 TEX264Q9Y6I9 313 aa11.5□□□□□ -0.57
YBX3-217ENST00000546164 SLC9B1P1A6NJY1 282 aa11.49□□□□□ -0.57
YBX3-217ENST00000546164 BANF1O75531 89 aa11.49□□□□□ -0.57
YBX3-217ENST00000546164 MATN4O95460 622 aa11.49□□□□□ -0.57
YBX3-217ENST00000546164 CHRM5P08912 532 aaPredicted RBP11.49□□□□□ -0.57
YBX3-217ENST00000546164 EBLN1P0CF75 366 aa11.49□□□□□ -0.57
YBX3-217ENST00000546164 CHRM3P20309 590 aa11.49□□□□□ -0.57
YBX3-217ENST00000546164 CDH3P22223 829 aa11.49□□□□□ -0.57
YBX3-217ENST00000546164 PKLRP30613 574 aa11.49□□□□□ -0.57
YBX3-217ENST00000546164 CCNFP41002 786 aa11.49□□□□□ -0.57
YBX3-217ENST00000546164 RPL21P46778 160 aaKnown RBP11.49□□□□□ -0.57
YBX3-217ENST00000546164 CLCN7P51798 805 aa11.49□□□□□ -0.57
YBX3-217ENST00000546164 EMP3P54852 163 aa11.49□□□□□ -0.57
YBX3-217ENST00000546164 ARL4CP56559 192 aa11.49□□□□□ -0.57
YBX3-217ENST00000546164 TUBB4BP68371 445 aa11.49□□□□□ -0.57
YBX3-217ENST00000546164 TUBB3Q13509 450 aa11.49□□□□□ -0.57
YBX3-217ENST00000546164 TUBB2AQ13885 445 aa11.49□□□□□ -0.57
YBX3-217ENST00000546164 KIR2DS3Q14952 304 aa11.49□□□□□ -0.57
YBX3-217ENST00000546164 TTLL9Q3SXZ7 439 aa11.49□□□□□ -0.57
YBX3-217ENST00000546164 MANEAQ5SRI9 462 aa11.49□□□□□ -0.57
YBX3-217ENST00000546164 TMTC4Q5T4D3 741 aa11.49□□□□□ -0.57
YBX3-217ENST00000546164 STEAP4Q687X5 459 aa11.49□□□□□ -0.57
YBX3-217ENST00000546164 ZNF549Q6P9A3 640 aa11.49□□□□□ -0.57
YBX3-217ENST00000546164 SPESP1Q6UW49 350 aa11.49□□□□□ -0.57
YBX3-217ENST00000546164 CCDC81Q6ZN84 652 aa11.49□□□□□ -0.57
YBX3-217ENST00000546164 NEK10Q6ZWH5 1172 aa11.49□□□□□ -0.57
YBX3-217ENST00000546164 TIPARPQ7Z3E1 657 aaKnown RBP11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms