RNA–Protein interactions for RNA: ENST00000545540.5

USP28-214, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 2 BASIC

Gene USP28, Length 3,431 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-214ENST00000545540 TTPALQ9BTX7 342 aa14.72□□□□□ -0.05
USP28-214ENST00000545540 FUNDC2Q9BWH2 189 aa14.72□□□□□ -0.05
USP28-214ENST00000545540 MYOFQ9NZM1 2061 aa14.72□□□□□ -0.05
USP28-214ENST00000545540 ELOVL7A1L3X0 281 aa14.72□□□□□ -0.05
USP28-214ENST00000545540 MANSC4A6NHS7 340 aaPredicted RBP14.72□□□□□ -0.05
USP28-214ENST00000545540 RAD51BO15315 384 aa14.72□□□□□ -0.05
USP28-214ENST00000545540 EOMESO95936 686 aa14.72□□□□□ -0.05
USP28-214ENST00000545540 OTCP00480 354 aa14.72□□□□□ -0.05
USP28-214ENST00000545540 ESR1P03372 595 aa14.72□□□□□ -0.05
USP28-214ENST00000545540 FUCA1P04066 466 aa14.72□□□□□ -0.05
USP28-214ENST00000545540 GALTP07902 379 aa14.72□□□□□ -0.05
USP28-214ENST00000545540 HOXB8P17481 243 aaPredicted RBP14.72□□□□□ -0.05
USP28-214ENST00000545540 HTR1BP28222 390 aa14.72□□□□□ -0.05
USP28-214ENST00000545540 CDH18Q13634 790 aa14.72□□□□□ -0.05
USP28-214ENST00000545540 MRPL58Q14197 206 aaKnown RBP14.72□□□□□ -0.05
USP28-214ENST00000545540 ZXDCQ2QGD7 858 aaPredicted RBP14.72□□□□□ -0.05
USP28-214ENST00000545540 POM121L1PQ3SYA9 428 aa14.72□□□□□ -0.05
USP28-214ENST00000545540 ADGRF1Q5T601 910 aa14.72□□□□□ -0.05
USP28-214ENST00000545540 ZNF648Q5T619 568 aaPredicted RBP14.72□□□□□ -0.05
USP28-214ENST00000545540 CCSAPQ6IQ19 270 aaPredicted RBP14.72□□□□□ -0.05
USP28-214ENST00000545540 ZSWIM9Q86XI8 627 aa14.72□□□□□ -0.05
USP28-214ENST00000545540 ZNF548Q8NEK5 533 aaPredicted RBP14.72□□□□□ -0.05
USP28-214ENST00000545540 UPF1Q92900 1129 aaKnown RBP eCLIP14.72□□□□□ -0.05
USP28-214ENST00000545540 ZBTB18Q99592 522 aa14.72□□□□□ -0.05
USP28-214ENST00000545540 ZFYVE1Q9HBF4 777 aa14.72□□□□□ -0.05
USP28-214ENST00000545540 ZNF451Q9Y4E5 1061 aa14.72□□□□□ -0.05
USP28-214ENST00000545540 DOCK6Q96HP0 2047 aa14.72□□□□□ -0.05
USP28-214ENST00000545540 SYN3O14994 580 aa14.72□□□□□ -0.05
USP28-214ENST00000545540 BCKDHAP12694 445 aa14.72□□□□□ -0.05
USP28-214ENST00000545540 AKT1P31749 480 aa14.72□□□□□ -0.05
USP28-214ENST00000545540 HNF1BP35680 557 aa14.72□□□□□ -0.05
USP28-214ENST00000545540 RAD23AP54725 363 aa14.72□□□□□ -0.05
USP28-214ENST00000545540 FKBP1BP68106 108 aa14.72□□□□□ -0.05
USP28-214ENST00000545540 RAPSNQ13702 412 aa14.72□□□□□ -0.05
USP28-214ENST00000545540 BROXQ5VW32 411 aa14.72□□□□□ -0.05
USP28-214ENST00000545540 ZNF773Q6PK81 442 aa14.72□□□□□ -0.05
USP28-214ENST00000545540 PAPD5Q8NDF8 572 aaKnown RBP14.72□□□□□ -0.05
USP28-214ENST00000545540 PSD4Q8NDX1 1056 aa14.72□□□□□ -0.05
USP28-214ENST00000545540 CHDHQ8NE62 594 aaPredicted RBP14.72□□□□□ -0.05
USP28-214ENST00000545540 OR13F1Q8NGS4 319 aa14.72□□□□□ -0.05
USP28-214ENST00000545540 APOLD1Q96LR9 279 aa14.72□□□□□ -0.05
USP28-214ENST00000545540 CASD1Q96PB1 797 aa14.72□□□□□ -0.05
USP28-214ENST00000545540 ALOXE3Q9BYJ1 711 aa14.72□□□□□ -0.05
USP28-214ENST00000545540 P2RY12Q9H244 342 aa14.72□□□□□ -0.05
USP28-214ENST00000545540 LRTM1Q9HBL6 345 aa14.72□□□□□ -0.05
USP28-214ENST00000545540 TBC1D23Q9NUY8 699 aa14.72□□□□□ -0.05
USP28-214ENST00000545540 LHX3Q9UBR4 397 aa14.72□□□□□ -0.05
USP28-214ENST00000545540 PTBP2Q9UKA9 531 aaKnown RBP14.72□□□□□ -0.05
USP28-214ENST00000545540 A0A1B0GVM2 712 aa14.71□□□□□ -0.05
USP28-214ENST00000545540 GAPDHSO14556 408 aaPredicted RBP14.71□□□□□ -0.05
USP28-214ENST00000545540 ATP6V1G1O75348 118 aa14.71□□□□□ -0.05
USP28-214ENST00000545540 PDYNP01213 254 aa14.71□□□□□ -0.05
USP28-214ENST00000545540 IGHA2P01877 340 aa14.71□□□□□ -0.05
USP28-214ENST00000545540 UMPSP11172 480 aa14.71□□□□□ -0.05
USP28-214ENST00000545540 BOP1Q14137 746 aaKnown RBP14.71□□□□□ -0.05
USP28-214ENST00000545540 CARTPTQ16568 116 aa14.71□□□□□ -0.05
USP28-214ENST00000545540 C6orf141Q5SZD1 244 aa14.71□□□□□ -0.05
USP28-214ENST00000545540 NCEH1Q6PIU2 408 aa14.71□□□□□ -0.05
USP28-214ENST00000545540 CRTC3Q6UUV7 619 aa14.71□□□□□ -0.05
USP28-214ENST00000545540 Q6ZPB1 254 aaPredicted RBP14.71□□□□□ -0.05
USP28-214ENST00000545540 CEP68Q76N32 757 aa14.71□□□□□ -0.05
USP28-214ENST00000545540 ZNF551Q7Z340 670 aaPredicted RBP14.71□□□□□ -0.05
USP28-214ENST00000545540 PDPRQ8NCN5 879 aa14.71□□□□□ -0.05
USP28-214ENST00000545540 FAM120BQ96EK7 910 aaKnown RBP14.71□□□□□ -0.05
USP28-214ENST00000545540 PARVBQ9HBI1 364 aa14.71□□□□□ -0.05
USP28-214ENST00000545540 ARL15Q9NXU5 204 aa14.71□□□□□ -0.05
USP28-214ENST00000545540 TUBA8Q9NY65 449 aaPredicted RBP14.71□□□□□ -0.05
USP28-214ENST00000545540 EIF3LQ9Y262 564 aaKnown RBP14.71□□□□□ -0.05
USP28-214ENST00000545540 CCL27Q9Y4X3 112 aa14.71□□□□□ -0.05
USP28-214ENST00000545540 OCM2P0CE71 109 aa14.71□□□□□ -0.05
USP28-214ENST00000545540 OCMP0CE72 109 aaPredicted RBP14.71□□□□□ -0.05
USP28-214ENST00000545540 GNPDA1P46926 289 aa14.71□□□□□ -0.05
USP28-214ENST00000545540 KIAA0040Q15053 153 aa14.71□□□□□ -0.05
USP28-214ENST00000545540 CYP27C1Q4G0S4 372 aa14.71□□□□□ -0.05
USP28-214ENST00000545540 OR4F3Q6IEY1 312 aa14.71□□□□□ -0.05
USP28-214ENST00000545540 ADNP2Q6IQ32 1131 aa14.71□□□□□ -0.05
USP28-214ENST00000545540 DOK6Q6PKX4 331 aa14.71□□□□□ -0.05
USP28-214ENST00000545540 CENPSQ8N2Z9 138 aa14.71□□□□□ -0.05
USP28-214ENST00000545540 BEND7Q8N7W2 519 aaPredicted RBP14.71□□□□□ -0.05
USP28-214ENST00000545540 FATE1Q969F0 183 aa14.71□□□□□ -0.05
USP28-214ENST00000545540 FAM126AQ9BYI3 521 aaPredicted RBP14.71□□□□□ -0.05
USP28-214ENST00000545540 POLE4Q9NR33 117 aa14.71□□□□□ -0.05
USP28-214ENST00000545540 HEBP1Q9NRV9 189 aa14.71□□□□□ -0.05
USP28-214ENST00000545540 BAG5Q9UL15 447 aa14.71□□□□□ -0.05
USP28-214ENST00000545540 ABCG2Q9UNQ0 655 aa14.71□□□□□ -0.05
USP28-214ENST00000545540 PDE10AQ9Y233 779 aa14.71□□□□□ -0.05
USP28-214ENST00000545540 ILVBLA1L0T0 632 aa14.7□□□□□ -0.06
USP28-214ENST00000545540 OR6C75A6NL08 312 aa14.7□□□□□ -0.06
USP28-214ENST00000545540 PER2O15055 1255 aa14.7□□□□□ -0.06
USP28-214ENST00000545540 CREG1O75629 220 aa14.7□□□□□ -0.06
USP28-214ENST00000545540 BPIP17213 487 aa14.7□□□□□ -0.06
USP28-214ENST00000545540 OPRL1P41146 370 aa14.7□□□□□ -0.06
USP28-214ENST00000545540 CTSOP43234 321 aaPredicted RBP14.7□□□□□ -0.06
USP28-214ENST00000545540 DGKEP52429 567 aa14.7□□□□□ -0.06
USP28-214ENST00000545540 OCA2Q04671 838 aa14.7□□□□□ -0.06
USP28-214ENST00000545540 CACNG1Q06432 222 aa14.7□□□□□ -0.06
USP28-214ENST00000545540 NFATC2Q13469 925 aa14.7□□□□□ -0.06
USP28-214ENST00000545540 MAPK11Q15759 364 aa14.7□□□□□ -0.06
USP28-214ENST00000545540 COQ5Q5HYK3 327 aa14.7□□□□□ -0.06
USP28-214ENST00000545540 TMEM236Q5W0B7 351 aa14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms