RNA–Protein interactions for RNA: ENST00000544093.5

CHFR-222, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 942 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-222ENST00000544093 LPGAT1Q92604 370 aa22.54■■□□□ 1.2
CHFR-222ENST00000544093 NAPGQ99747 312 aaPredicted RBP22.54■■□□□ 1.2
CHFR-222ENST00000544093 ARHGAP9Q9BRR9 750 aa22.54■■□□□ 1.2
CHFR-222ENST00000544093 XKR8Q9H6D3 395 aa22.54■■□□□ 1.2
CHFR-222ENST00000544093 KCND1Q9NSA2 647 aa22.54■■□□□ 1.2
CHFR-222ENST00000544093 INTS10Q9NVR2 710 aaKnown RBP22.54■■□□□ 1.2
CHFR-222ENST00000544093 KCND3Q9UK17 655 aa22.54■■□□□ 1.2
CHFR-222ENST00000544093 PADI1Q9ULC6 663 aa22.54■■□□□ 1.2
CHFR-222ENST00000544093 TDRKHQ9Y2W6 561 aaKnown RBP22.54■■□□□ 1.2
CHFR-222ENST00000544093 SAR1BQ9Y6B6 198 aa22.54■■□□□ 1.2
CHFR-222ENST00000544093 PIEZO2Q9H5I5 2752 aa22.54■■□□□ 1.2
CHFR-222ENST00000544093 LOC101059948A0A1B0GTJ6 334 aa22.53■■□□□ 1.2
CHFR-222ENST00000544093 SLC9B1P1A6NJY1 282 aa22.53■■□□□ 1.2
CHFR-222ENST00000544093 IQCF5A8MTL0 148 aa22.53■■□□□ 1.2
CHFR-222ENST00000544093 GOLGA8MH3BSY2 632 aa22.53■■□□□ 1.2
CHFR-222ENST00000544093 USP1O94782 785 aa22.53■■□□□ 1.2
CHFR-222ENST00000544093 SFTPCP11686 197 aa22.53■■□□□ 1.2
CHFR-222ENST00000544093 RAB28P51157 221 aa22.53■■□□□ 1.2
CHFR-222ENST00000544093 CSE1LP55060 971 aaKnown RBP22.53■■□□□ 1.2
CHFR-222ENST00000544093 C19orf57Q0VDD7 668 aa22.53■■□□□ 1.2
CHFR-222ENST00000544093 ANKRD20A4Q4UJ75 823 aa22.53■■□□□ 1.2
CHFR-222ENST00000544093 PWWP2BQ6NUJ5 590 aa22.53■■□□□ 1.2
CHFR-222ENST00000544093 UNC5AQ6ZN44 842 aa22.53■■□□□ 1.2
CHFR-222ENST00000544093 SYDE1Q6ZW31 735 aaPredicted RBP22.53■■□□□ 1.2
CHFR-222ENST00000544093 CILP2Q8IUL8 1156 aa22.53■■□□□ 1.2
CHFR-222ENST00000544093 KRT222Q8N1A0 295 aa22.53■■□□□ 1.2
CHFR-222ENST00000544093 LKAAEAR1Q8TD35 194 aa22.53■■□□□ 1.2
CHFR-222ENST00000544093 ZNF669Q96BR6 464 aaPredicted RBP22.53■■□□□ 1.2
CHFR-222ENST00000544093 ZNF501Q96CX3 271 aaPredicted RBP22.53■■□□□ 1.2
CHFR-222ENST00000544093 ASIC3Q9UHC3 531 aa22.53■■□□□ 1.2
CHFR-222ENST00000544093 CTAGE9A4FU28 777 aa22.52■■□□□ 1.2
CHFR-222ENST00000544093 CPNE3O75131 537 aaKnown RBP22.52■■□□□ 1.2
CHFR-222ENST00000544093 CHRM5P08912 532 aaPredicted RBP22.52■■□□□ 1.2
CHFR-222ENST00000544093 THOC5Q13769 683 aaKnown RBP22.52■■□□□ 1.2
CHFR-222ENST00000544093 PTK6Q13882 451 aa22.52■■□□□ 1.2
CHFR-222ENST00000544093 KIR2DS3Q14952 304 aa22.52■■□□□ 1.2
CHFR-222ENST00000544093 RNASEH2BQ5TBB1 312 aaKnown RBP22.52■■□□□ 1.2
CHFR-222ENST00000544093 TMEM126BQ8IUX1 230 aa22.52■■□□□ 1.2
CHFR-222ENST00000544093 CALML6Q8TD86 181 aa22.52■■□□□ 1.2
CHFR-222ENST00000544093 MED8Q96G25 268 aa22.52■■□□□ 1.2
CHFR-222ENST00000544093 FOPNLQ96NB1 174 aa22.52■■□□□ 1.2
CHFR-222ENST00000544093 BIRC8Q96P09 236 aa22.52■■□□□ 1.2
CHFR-222ENST00000544093 RAB11FIP5Q9BXF6 653 aa22.52■■□□□ 1.2
CHFR-222ENST00000544093 FAM117AQ9C073 453 aa22.52■■□□□ 1.2
CHFR-222ENST00000544093 CHRNA10Q9GZZ6 450 aa22.52■■□□□ 1.2
CHFR-222ENST00000544093 DDX47Q9H0S4 455 aaKnown RBP22.52■■□□□ 1.2
CHFR-222ENST00000544093 RNF14Q9UBS8 474 aa22.52■■□□□ 1.2
CHFR-222ENST00000544093 PCDHB3Q9Y5E6 796 aa22.52■■□□□ 1.2
CHFR-222ENST00000544093 C21orf140B9A014 251 aa22.51■■□□□ 1.19
CHFR-222ENST00000544093 GOLGA8KD6RF30 607 aa22.51■■□□□ 1.19
CHFR-222ENST00000544093 GOLGA8TH3BQL2 631 aa22.51■■□□□ 1.19
CHFR-222ENST00000544093 SCRG1O75711 98 aa22.51■■□□□ 1.19
CHFR-222ENST00000544093 ATP5DP30049 168 aa22.51■■□□□ 1.19
CHFR-222ENST00000544093 DLSTP36957 453 aa22.51■■□□□ 1.19
CHFR-222ENST00000544093 GPR19Q15760 415 aa22.51■■□□□ 1.19
CHFR-222ENST00000544093 KCTD19Q17RG1 926 aaPredicted RBP22.51■■□□□ 1.19
CHFR-222ENST00000544093 VRK3Q8IV63 474 aa22.51■■□□□ 1.19
CHFR-222ENST00000544093 RAB42Q8N4Z0 105 aa22.51■■□□□ 1.19
CHFR-222ENST00000544093 GABPB2Q8TAK5 448 aaPredicted RBP22.51■■□□□ 1.19
CHFR-222ENST00000544093 MAGEC3Q8TD91 643 aa22.51■■□□□ 1.19
CHFR-222ENST00000544093 STARD8Q92502 1023 aa22.51■■□□□ 1.19
CHFR-222ENST00000544093 SLC22A18Q96BI1 424 aa22.51■■□□□ 1.19
CHFR-222ENST00000544093 TCTN2Q96GX1 697 aa22.51■■□□□ 1.19
CHFR-222ENST00000544093 TRAPPC9Q96Q05 1148 aa22.51■■□□□ 1.19
CHFR-222ENST00000544093 NAT9Q9BTE0 207 aa22.51■■□□□ 1.19
CHFR-222ENST00000544093 TWSG1Q9GZX9 223 aa22.51■■□□□ 1.19
CHFR-222ENST00000544093 LHX9Q9NQ69 397 aa22.51■■□□□ 1.19
CHFR-222ENST00000544093 MAD1L1Q9Y6D9 718 aa22.51■■□□□ 1.19
CHFR-222ENST00000544093 COL6A6A6NMZ7 2263 aa22.51■■□□□ 1.19
CHFR-222ENST00000544093 CCDC188H7C350 402 aa22.5■■□□□ 1.19
CHFR-222ENST00000544093 SMAPO00193 183 aa22.5■■□□□ 1.19
CHFR-222ENST00000544093 DNALI1O14645 258 aaPredicted RBP22.5■■□□□ 1.19
CHFR-222ENST00000544093 TIAF1O95411 115 aa22.5■■□□□ 1.19
CHFR-222ENST00000544093 ST6GAL1P15907 406 aa22.5■■□□□ 1.19
CHFR-222ENST00000544093 UGT2B7P16662 529 aa22.5■■□□□ 1.19
CHFR-222ENST00000544093 FMO4P31512 558 aa22.5■■□□□ 1.19
CHFR-222ENST00000544093 CCNFP41002 786 aa22.5■■□□□ 1.19
CHFR-222ENST00000544093 PAFAH1B1P43034 410 aa22.5■■□□□ 1.19
CHFR-222ENST00000544093 ABRQ12979 859 aa22.5■■□□□ 1.19
CHFR-222ENST00000544093 KYNUQ16719 465 aa22.5■■□□□ 1.19
CHFR-222ENST00000544093 LONRF1Q17RB8 773 aa22.5■■□□□ 1.19
CHFR-222ENST00000544093 CTSL3PQ5NE16 218 aa22.5■■□□□ 1.19
CHFR-222ENST00000544093 ZNF470Q6ECI4 717 aa22.5■■□□□ 1.19
CHFR-222ENST00000544093 BORAQ6PGQ7 559 aa22.5■■□□□ 1.19
CHFR-222ENST00000544093 CREG2Q8IUH2 290 aa22.5■■□□□ 1.19
CHFR-222ENST00000544093 UNC5BQ8IZJ1 945 aa22.5■■□□□ 1.19
CHFR-222ENST00000544093 SEC14L1Q92503 715 aa22.5■■□□□ 1.19
CHFR-222ENST00000544093 RAD51AP1Q96B01 352 aa22.5■■□□□ 1.19
CHFR-222ENST00000544093 SIGLEC10Q96LC7 697 aa22.5■■□□□ 1.19
CHFR-222ENST00000544093 PPM1MQ96MI6 270 aa22.5■■□□□ 1.19
CHFR-222ENST00000544093 LRFN5Q96NI6 719 aa22.5■■□□□ 1.19
CHFR-222ENST00000544093 OR2A14Q96R47 310 aa22.5■■□□□ 1.19
CHFR-222ENST00000544093 SERTAD3Q9UJW9 196 aa22.5■■□□□ 1.19
CHFR-222ENST00000544093 CROTQ9UKG9 612 aa22.5■■□□□ 1.19
CHFR-222ENST00000544093 PCDHGA6Q9Y5G7 932 aa22.5■■□□□ 1.19
CHFR-222ENST00000544093 A0A0J9YY10 115 aa22.49■■□□□ 1.19
CHFR-222ENST00000544093 ZCWPW2A0A1B0GU75 182 aa22.49■■□□□ 1.19
CHFR-222ENST00000544093 E5RI56 91 aa22.49■■□□□ 1.19
CHFR-222ENST00000544093 RECKO95980 971 aa22.49■■□□□ 1.19
CHFR-222ENST00000544093 PKLRP30613 574 aa22.49■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms