RNA–Protein interactions for RNA: ENST00000544052.6

SCFD1-207, Transcript of sec1 family domain containing 1, humanhuman

TSL 2 BASIC

Gene SCFD1, Length 2,058 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-207ENST00000544052 PIGTQ969N2 578 aa3.59□□□□□ -1.83
SCFD1-207ENST00000544052 MTBPQ96DY7 904 aa3.59□□□□□ -1.83
SCFD1-207ENST00000544052 ZNF778Q96MU6 729 aa3.59□□□□□ -1.83
SCFD1-207ENST00000544052 SPAG5Q96R06 1193 aa3.59□□□□□ -1.83
SCFD1-207ENST00000544052 KATNB1Q9BVA0 655 aa3.59□□□□□ -1.83
SCFD1-207ENST00000544052 LRMDAQ9H2I8 198 aa3.59□□□□□ -1.83
SCFD1-207ENST00000544052 PCDH9Q9HC56 1237 aa3.59□□□□□ -1.83
SCFD1-207ENST00000544052 COQ3Q9NZJ6 369 aa3.59□□□□□ -1.83
SCFD1-207ENST00000544052 ZFP37Q9Y6Q3 630 aaPredicted RBP3.59□□□□□ -1.83
SCFD1-207ENST00000544052 COL5A2P05997 1499 aaPredicted RBP3.59□□□□□ -1.84
SCFD1-207ENST00000544052 CD163L1Q9NR16 1453 aa3.59□□□□□ -1.84
SCFD1-207ENST00000544052 ZNF521Q96K83 1311 aa3.58□□□□□ -1.84
SCFD1-207ENST00000544052 CLIC2O15247 247 aa3.58□□□□□ -1.84
SCFD1-207ENST00000544052 TOMM40O96008 361 aa3.58□□□□□ -1.84
SCFD1-207ENST00000544052 TMPOP42166 694 aaKnown RBP3.58□□□□□ -1.84
SCFD1-207ENST00000544052 CRKLP46109 303 aaKnown RBP3.58□□□□□ -1.84
SCFD1-207ENST00000544052 PLCD1P51178 756 aa3.58□□□□□ -1.84
SCFD1-207ENST00000544052 ZNF75DP51815 510 aa3.58□□□□□ -1.84
SCFD1-207ENST00000544052 CAPZA1P52907 286 aa3.58□□□□□ -1.84
SCFD1-207ENST00000544052 CTSCP53634 463 aa3.58□□□□□ -1.84
SCFD1-207ENST00000544052 HSPB3Q12988 150 aa3.58□□□□□ -1.84
SCFD1-207ENST00000544052 PRKAA1Q13131 559 aa3.58□□□□□ -1.84
SCFD1-207ENST00000544052 E2F5Q15329 346 aa3.58□□□□□ -1.84
SCFD1-207ENST00000544052 GCNT6Q5T4J0 391 aa3.58□□□□□ -1.84
SCFD1-207ENST00000544052 C8orf82Q6P1X6 216 aaPredicted RBP3.58□□□□□ -1.84
SCFD1-207ENST00000544052 FAM198BQ6UWH4 519 aa3.58□□□□□ -1.84
SCFD1-207ENST00000544052 FAM114A1Q8IWE2 563 aa3.58□□□□□ -1.84
SCFD1-207ENST00000544052 CEP57L1Q8IYX8 460 aa3.58□□□□□ -1.84
SCFD1-207ENST00000544052 GBGT1Q8N5D6 347 aa3.58□□□□□ -1.84
SCFD1-207ENST00000544052 TMED6Q8WW62 240 aa3.58□□□□□ -1.84
SCFD1-207ENST00000544052 SEMA4DQ92854 862 aa3.58□□□□□ -1.84
SCFD1-207ENST00000544052 MR1Q95460 341 aa3.58□□□□□ -1.84
SCFD1-207ENST00000544052 HHATLQ9HCP6 504 aa3.58□□□□□ -1.84
SCFD1-207ENST00000544052 MYNNQ9NPC7 610 aa3.58□□□□□ -1.84
SCFD1-207ENST00000544052 HIF1ANQ9NWT6 349 aa3.58□□□□□ -1.84
SCFD1-207ENST00000544052 MYO6Q9UM54 1294 aa3.58□□□□□ -1.84
SCFD1-207ENST00000544052 OR2W1Q9Y3N9 320 aa3.58□□□□□ -1.84
SCFD1-207ENST00000544052 DISP2A7MBM2 1401 aa3.58□□□□□ -1.84
SCFD1-207ENST00000544052 ACEP12821 1306 aa3.58□□□□□ -1.84
SCFD1-207ENST00000544052 H0YAE9 185 aa3.58□□□□□ -1.84
SCFD1-207ENST00000544052 MED24O75448 989 aa3.58□□□□□ -1.84
SCFD1-207ENST00000544052 GAGE7O76087 117 aa3.58□□□□□ -1.84
SCFD1-207ENST00000544052 BMP10O95393 424 aa3.58□□□□□ -1.84
SCFD1-207ENST00000544052 CRYABP02511 175 aaKnown RBP3.58□□□□□ -1.84
SCFD1-207ENST00000544052 HSP90AB1P08238 724 aaKnown RBP3.58□□□□□ -1.84
SCFD1-207ENST00000544052 DANCRP0C864 163 aa3.58□□□□□ -1.84
SCFD1-207ENST00000544052 GAGE12FP0CL80 117 aa3.58□□□□□ -1.84
SCFD1-207ENST00000544052 GAGE12GP0CL81 117 aa3.58□□□□□ -1.84
SCFD1-207ENST00000544052 GAGE12IP0CL82 117 aa3.58□□□□□ -1.84
SCFD1-207ENST00000544052 ITGA2P17301 1181 aa3.58□□□□□ -1.84
SCFD1-207ENST00000544052 MPZP25189 248 aa3.58□□□□□ -1.84
SCFD1-207ENST00000544052 PNRC1Q12796 327 aaPredicted RBP3.58□□□□□ -1.84
SCFD1-207ENST00000544052 GAGE1Q13065 139 aa3.58□□□□□ -1.84
SCFD1-207ENST00000544052 GAGE4Q13068 117 aa3.58□□□□□ -1.84
SCFD1-207ENST00000544052 NFATC4Q14934 902 aa3.58□□□□□ -1.84
SCFD1-207ENST00000544052 ZRANB3Q5FWF4 1079 aa3.58□□□□□ -1.84
SCFD1-207ENST00000544052 CCNI2Q6ZMN8 369 aaPredicted RBP3.58□□□□□ -1.84
SCFD1-207ENST00000544052 FAM219AQ8IW50 185 aa3.58□□□□□ -1.84
SCFD1-207ENST00000544052 ANKRD13CQ8N6S4 541 aa3.58□□□□□ -1.84
SCFD1-207ENST00000544052 ROBO4Q8WZ75 1007 aa3.58□□□□□ -1.84
SCFD1-207ENST00000544052 EXT2Q93063 718 aa3.58□□□□□ -1.84
SCFD1-207ENST00000544052 SPSB1Q96BD6 273 aa3.58□□□□□ -1.84
SCFD1-207ENST00000544052 FERMT1Q9BQL6 677 aa3.58□□□□□ -1.84
SCFD1-207ENST00000544052 CDK19Q9BWU1 502 aa3.58□□□□□ -1.84
SCFD1-207ENST00000544052 MOV10L1Q9BXT6 1211 aaKnown RBP3.58□□□□□ -1.84
SCFD1-207ENST00000544052 SLC29A3Q9BZD2 475 aa3.58□□□□□ -1.84
SCFD1-207ENST00000544052 CSTL1Q9H114 145 aa3.58□□□□□ -1.84
SCFD1-207ENST00000544052 FZD8Q9H461 694 aa3.58□□□□□ -1.84
SCFD1-207ENST00000544052 PADI2Q9Y2J8 665 aa3.58□□□□□ -1.84
SCFD1-207ENST00000544052 KCNK7Q9Y2U2 307 aa3.58□□□□□ -1.84
SCFD1-207ENST00000544052 USP6P35125 1406 aa3.57□□□□□ -1.84
SCFD1-207ENST00000544052 PPIP5K1Q6PFW1 1433 aa3.57□□□□□ -1.84
SCFD1-207ENST00000544052 MYOM1P52179 1685 aa3.57□□□□□ -1.84
SCFD1-207ENST00000544052 FAM208AQ9UK61 1670 aaKnown RBP3.57□□□□□ -1.84
SCFD1-207ENST00000544052 PAPPAQ13219 1627 aa3.57□□□□□ -1.84
SCFD1-207ENST00000544052 BTAF1O14981 1849 aa3.57□□□□□ -1.84
SCFD1-207ENST00000544052 OR5K3A6NET4 321 aa3.57□□□□□ -1.84
SCFD1-207ENST00000544052 TMEM221A6NGB7 291 aa3.57□□□□□ -1.84
SCFD1-207ENST00000544052 ANXA2P2A6NMY6 339 aa3.57□□□□□ -1.84
SCFD1-207ENST00000544052 PI4K2BG5E9Z4 385 aa3.57□□□□□ -1.84
SCFD1-207ENST00000544052 SYNCRIPO60506 623 aaKnown RBP3.57□□□□□ -1.84
SCFD1-207ENST00000544052 TSPAN1O60635 241 aa3.57□□□□□ -1.84
SCFD1-207ENST00000544052 ACSL3O95573 720 aa3.57□□□□□ -1.84
SCFD1-207ENST00000544052 GBAP04062 536 aa3.57□□□□□ -1.84
SCFD1-207ENST00000544052 KRT19P08727 400 aa3.57□□□□□ -1.84
SCFD1-207ENST00000544052 ZNF12P17014 697 aa3.57□□□□□ -1.84
SCFD1-207ENST00000544052 TKTP29401 623 aaKnown RBP3.57□□□□□ -1.84
SCFD1-207ENST00000544052 AMPHP49418 695 aa3.57□□□□□ -1.84
SCFD1-207ENST00000544052 BMXP51813 675 aa3.57□□□□□ -1.84
SCFD1-207ENST00000544052 TPD52P55327 224 aaPredicted RBP3.57□□□□□ -1.84
SCFD1-207ENST00000544052 SLC20A2Q08357 652 aa3.57□□□□□ -1.84
SCFD1-207ENST00000544052 GAGE2BQ13066 116 aa3.57□□□□□ -1.84
SCFD1-207ENST00000544052 GAGE2EQ4V326 116 aa3.57□□□□□ -1.84
SCFD1-207ENST00000544052 GAGE2AQ6NT46 116 aa3.57□□□□□ -1.84
SCFD1-207ENST00000544052 ZNF549Q6P9A3 640 aa3.57□□□□□ -1.84
SCFD1-207ENST00000544052 SATL1Q86VE3 508 aa3.57□□□□□ -1.84
SCFD1-207ENST00000544052 RNF113BQ8IZP6 322 aaKnown RBP3.57□□□□□ -1.84
SCFD1-207ENST00000544052 SIX6OS1Q8N1H7 587 aa3.57□□□□□ -1.84
SCFD1-207ENST00000544052 CLIP4Q8N3C7 705 aa3.57□□□□□ -1.84
SCFD1-207ENST00000544052 ZNF114Q8NC26 417 aa3.57□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms