RNA–Protein interactions for RNA: ENST00000543939.5

COPS7A-218, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3

Gene COPS7A, Length 1,728 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-218ENST00000543939 WDR47O94967 919 aa19.34■□□□□ 0.69
COPS7A-218ENST00000543939 HMOX2P30519 316 aa19.34■□□□□ 0.69
COPS7A-218ENST00000543939 BDKRB1P46663 353 aa19.34■□□□□ 0.69
COPS7A-218ENST00000543939 FASTKQ14296 549 aaKnown RBP19.34■□□□□ 0.69
COPS7A-218ENST00000543939 SLC44A4Q53GD3 710 aa19.34■□□□□ 0.69
COPS7A-218ENST00000543939 NEK5Q6P3R8 708 aa19.34■□□□□ 0.69
COPS7A-218ENST00000543939 RNF165Q6ZSG1 346 aa19.34■□□□□ 0.69
COPS7A-218ENST00000543939 KBTBD6Q86V97 674 aa19.34■□□□□ 0.69
COPS7A-218ENST00000543939 PARP9Q8IXQ6 854 aa19.34■□□□□ 0.69
COPS7A-218ENST00000543939 ARHGAP24Q8N264 748 aa19.34■□□□□ 0.69
COPS7A-218ENST00000543939 DPEP2Q9H4A9 486 aa19.34■□□□□ 0.69
COPS7A-218ENST00000543939 WDR26Q9H7D7 661 aa19.34■□□□□ 0.69
COPS7A-218ENST00000543939 SLC2A4RGQ9NR83 387 aa19.34■□□□□ 0.69
COPS7A-218ENST00000543939 RIC8BQ9NVN3 520 aa19.34■□□□□ 0.69
COPS7A-218ENST00000543939 RNF11Q9Y3C5 154 aa19.34■□□□□ 0.69
COPS7A-218ENST00000543939 SRFP11831 508 aa19.33■□□□□ 0.68
COPS7A-218ENST00000543939 ITGAXP20702 1163 aa19.33■□□□□ 0.68
COPS7A-218ENST00000543939 NFE2L1Q14494 772 aa19.33■□□□□ 0.68
COPS7A-218ENST00000543939 PLA2G4EQ3MJ16 856 aa19.33■□□□□ 0.68
COPS7A-218ENST00000543939 CCSMST1Q4G0I0 132 aa19.33■□□□□ 0.68
COPS7A-218ENST00000543939 IL27RAQ6UWB1 636 aa19.33■□□□□ 0.68
COPS7A-218ENST00000543939 FAM83HQ6ZRV2 1179 aaPredicted RBP19.33■□□□□ 0.68
COPS7A-218ENST00000543939 Q6ZSR9 355 aa19.33■□□□□ 0.68
COPS7A-218ENST00000543939 SPATA19Q7Z5L4 167 aa19.33■□□□□ 0.68
COPS7A-218ENST00000543939 LRRTM4Q86VH4 590 aa19.33■□□□□ 0.68
COPS7A-218ENST00000543939 KLHDC8AQ8IYD2 350 aa19.33■□□□□ 0.68
COPS7A-218ENST00000543939 SNX31Q8N9S9 440 aa19.33■□□□□ 0.68
COPS7A-218ENST00000543939 ATL1Q8WXF7 558 aa19.33■□□□□ 0.68
COPS7A-218ENST00000543939 PYCR2Q96C36 320 aa19.33■□□□□ 0.68
COPS7A-218ENST00000543939 DNAJC11Q9NVH1 559 aa19.33■□□□□ 0.68
COPS7A-218ENST00000543939 MMP17Q9ULZ9 603 aa19.33■□□□□ 0.68
COPS7A-218ENST00000543939 NCKAP1Q9Y2A7 1128 aa19.33■□□□□ 0.68
COPS7A-218ENST00000543939 PRKAB1Q9Y478 270 aa19.33■□□□□ 0.68
COPS7A-218ENST00000543939 OR1A2Q9Y585 309 aa19.33■□□□□ 0.68
COPS7A-218ENST00000543939 DNMT3AQ9Y6K1 912 aaPredicted RBP19.33■□□□□ 0.68
COPS7A-218ENST00000543939 TBC1D3DA0A087WVF3 549 aa19.32■□□□□ 0.68
COPS7A-218ENST00000543939 TBC1D3IA0A087WXS9 549 aa19.32■□□□□ 0.68
COPS7A-218ENST00000543939 TBC1D3EA0A087X179 549 aa19.32■□□□□ 0.68
COPS7A-218ENST00000543939 TBC1D3KA0A087X1G2 549 aa19.32■□□□□ 0.68
COPS7A-218ENST00000543939 TBC1D3FA6NER0 549 aaPredicted RBP19.32■□□□□ 0.68
COPS7A-218ENST00000543939 GPR89AB7ZAQ6 455 aa19.32■□□□□ 0.68
COPS7A-218ENST00000543939 TBC1D3LB9A6J9 549 aa19.32■□□□□ 0.68
COPS7A-218ENST00000543939 PEX11AO75192 247 aa19.32■□□□□ 0.68
COPS7A-218ENST00000543939 C1orf105O95561 183 aa19.32■□□□□ 0.68
COPS7A-218ENST00000543939 TBC1D3HP0C7X1 549 aa19.32■□□□□ 0.68
COPS7A-218ENST00000543939 GPR89BP0CG08 455 aa19.32■□□□□ 0.68
COPS7A-218ENST00000543939 GPX3P22352 226 aa19.32■□□□□ 0.68
COPS7A-218ENST00000543939 ACADVLP49748 655 aa19.32■□□□□ 0.68
COPS7A-218ENST00000543939 RAP1GDS1P52306 607 aa19.32■□□□□ 0.68
COPS7A-218ENST00000543939 PFN3P60673 137 aa19.32■□□□□ 0.68
COPS7A-218ENST00000543939 STX1BP61266 288 aa19.32■□□□□ 0.68
COPS7A-218ENST00000543939 IRX1P78414 480 aaPredicted RBP19.32■□□□□ 0.68
COPS7A-218ENST00000543939 AGKQ53H12 422 aa19.32■□□□□ 0.68
COPS7A-218ENST00000543939 TBC1D3GQ6DHY5 549 aa19.32■□□□□ 0.68
COPS7A-218ENST00000543939 TBC1D3CQ6IPX1 549 aa19.32■□□□□ 0.68
COPS7A-218ENST00000543939 GK5Q6ZS86 529 aa19.32■□□□□ 0.68
COPS7A-218ENST00000543939 HOMEZQ8IX15 550 aa19.32■□□□□ 0.68
COPS7A-218ENST00000543939 TBC1D3Q8IZP1 549 aaPredicted RBP19.32■□□□□ 0.68
COPS7A-218ENST00000543939 OXR1Q8N573 874 aa19.32■□□□□ 0.68
COPS7A-218ENST00000543939 PKP4Q99569 1192 aa19.32■□□□□ 0.68
COPS7A-218ENST00000543939 THTPAQ9BU02 230 aa19.32■□□□□ 0.68
COPS7A-218ENST00000543939 C1QTNF7Q9BXJ2 289 aa19.32■□□□□ 0.68
COPS7A-218ENST00000543939 SLC29A3Q9BZD2 475 aa19.32■□□□□ 0.68
COPS7A-218ENST00000543939 ATG10Q9H0Y0 220 aa19.32■□□□□ 0.68
COPS7A-218ENST00000543939 PHPT1Q9NRX4 125 aaPredicted RBP19.32■□□□□ 0.68
COPS7A-218ENST00000543939 STOX2Q9P2F5 926 aaPredicted RBP19.32■□□□□ 0.68
COPS7A-218ENST00000543939 SLC22A14Q9Y267 594 aa19.32■□□□□ 0.68
COPS7A-218ENST00000543939 CLDN9O95484 217 aa19.31■□□□□ 0.68
COPS7A-218ENST00000543939 NDUFV2P19404 249 aa19.31■□□□□ 0.68
COPS7A-218ENST00000543939 CD72P21854 359 aa19.31■□□□□ 0.68
COPS7A-218ENST00000543939 ACADLP28330 430 aa19.31■□□□□ 0.68
COPS7A-218ENST00000543939 IGFALSP35858 605 aa19.31■□□□□ 0.68
COPS7A-218ENST00000543939 RPA4Q13156 261 aa19.31■□□□□ 0.68
COPS7A-218ENST00000543939 TDGQ13569 410 aa19.31■□□□□ 0.68
COPS7A-218ENST00000543939 ABRAXAS2Q15018 415 aa19.31■□□□□ 0.68
COPS7A-218ENST00000543939 MAPRE2Q15555 327 aa19.31■□□□□ 0.68
COPS7A-218ENST00000543939 GSTA3Q16772 222 aa19.31■□□□□ 0.68
COPS7A-218ENST00000543939 AGTRAPQ6RW13 159 aa19.31■□□□□ 0.68
COPS7A-218ENST00000543939 AMZ2Q86W34 360 aa19.31■□□□□ 0.68
COPS7A-218ENST00000543939 ASB12Q8WXK4 309 aa19.31■□□□□ 0.68
COPS7A-218ENST00000543939 RCN3Q96D15 328 aa19.31■□□□□ 0.68
COPS7A-218ENST00000543939 OR52A5Q9H2C5 316 aa19.31■□□□□ 0.68
COPS7A-218ENST00000543939 SLC23A2Q9UGH3 650 aa19.31■□□□□ 0.68
COPS7A-218ENST00000543939 SEC23IPQ9Y6Y8 1000 aaKnown RBP19.31■□□□□ 0.68
COPS7A-218ENST00000543939 AIM2O14862 343 aa19.31■□□□□ 0.68
COPS7A-218ENST00000543939 ATP6V1G2O95670 118 aa19.31■□□□□ 0.68
COPS7A-218ENST00000543939 ACADMP11310 421 aa19.31■□□□□ 0.68
COPS7A-218ENST00000543939 MYCLP1P12525 358 aaPredicted RBP19.31■□□□□ 0.68
COPS7A-218ENST00000543939 ITPKAP23677 461 aa19.31■□□□□ 0.68
COPS7A-218ENST00000543939 MRPL19P49406 292 aaKnown RBP19.31■□□□□ 0.68
COPS7A-218ENST00000543939 PPP2CBP62714 309 aa19.31■□□□□ 0.68
COPS7A-218ENST00000543939 PPP2CAP67775 309 aa19.31■□□□□ 0.68
COPS7A-218ENST00000543939 SFSWAPQ12872 951 aaKnown RBP19.31■□□□□ 0.68
COPS7A-218ENST00000543939 GGTA1PQ4G0N0 100 aa19.31■□□□□ 0.68
COPS7A-218ENST00000543939 C6orf136Q5SQH8 315 aa19.31■□□□□ 0.68
COPS7A-218ENST00000543939 KIAA1324Q6UXG2 1013 aaKnown RBP19.31■□□□□ 0.68
COPS7A-218ENST00000543939 SCUBE1Q8IWY4 988 aa19.31■□□□□ 0.68
COPS7A-218ENST00000543939 SFRP1Q8N474 314 aa19.31■□□□□ 0.68
COPS7A-218ENST00000543939 HLA-CQ95604 372 aa19.31■□□□□ 0.68
COPS7A-218ENST00000543939 ACTR8Q9H981 624 aa19.31■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms