RNA–Protein interactions for RNA: ENST00000543633.5

VPS33A-208, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS33A, Length 2,019 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-208ENST00000543633 VWA8A3KMH1 1905 aa13.45□□□□□ -0.26
VPS33A-208ENST00000543633 A0A096LPI6 279 aa13.45□□□□□ -0.26
VPS33A-208ENST00000543633 A0A0D9SEW6 157 aa13.45□□□□□ -0.26
VPS33A-208ENST00000543633 H3BNC9 293 aa13.45□□□□□ -0.26
VPS33A-208ENST00000543633 WNT9AO14904 365 aa13.45□□□□□ -0.26
VPS33A-208ENST00000543633 ADAM23O75077 832 aa13.45□□□□□ -0.26
VPS33A-208ENST00000543633 E2F6O75461 281 aa13.45□□□□□ -0.26
VPS33A-208ENST00000543633 EOMESO95936 686 aa13.45□□□□□ -0.26
VPS33A-208ENST00000543633 CNPP09543 421 aaKnown RBP13.45□□□□□ -0.26
VPS33A-208ENST00000543633 CYBAP13498 195 aa13.45□□□□□ -0.26
VPS33A-208ENST00000543633 HPCAL1P37235 193 aa13.45□□□□□ -0.26
VPS33A-208ENST00000543633 ARL1P40616 181 aaPredicted RBP13.45□□□□□ -0.26
VPS33A-208ENST00000543633 PIK3CGP48736 1102 aa13.45□□□□□ -0.26
VPS33A-208ENST00000543633 SP3Q02447 781 aa13.45□□□□□ -0.26
VPS33A-208ENST00000543633 CDK5R2Q13319 367 aa13.45□□□□□ -0.26
VPS33A-208ENST00000543633 FAM174BQ3ZCQ3 159 aa13.45□□□□□ -0.26
VPS33A-208ENST00000543633 HABP4Q5JVS0 413 aaKnown RBP13.45□□□□□ -0.26
VPS33A-208ENST00000543633 GNASQ5JWF2 1037 aa13.45□□□□□ -0.26
VPS33A-208ENST00000543633 CAPN13Q6MZZ7 669 aaPredicted RBP13.45□□□□□ -0.26
VPS33A-208ENST00000543633 OR7A2PQ8NGA2 310 aa13.45□□□□□ -0.26
VPS33A-208ENST00000543633 SGCDQ92629 289 aa13.45□□□□□ -0.26
VPS33A-208ENST00000543633 YIPF6Q96EC8 236 aa13.45□□□□□ -0.26
VPS33A-208ENST00000543633 NTMT1Q9BV86 223 aa13.45□□□□□ -0.26
VPS33A-208ENST00000543633 DGCR6LQ9BY27 220 aa13.45□□□□□ -0.26
VPS33A-208ENST00000543633 NACA2Q9H009 215 aa13.45□□□□□ -0.26
VPS33A-208ENST00000543633 DUSP21Q9H596 190 aa13.45□□□□□ -0.26
VPS33A-208ENST00000543633 INIPQ9NRY2 104 aa13.45□□□□□ -0.26
VPS33A-208ENST00000543633 PAK1IP1Q9NWT1 392 aaPredicted RBP13.45□□□□□ -0.26
VPS33A-208ENST00000543633 C1orf109Q9NX04 203 aa13.45□□□□□ -0.26
VPS33A-208ENST00000543633 BRCA2P51587 3418 aa13.45□□□□□ -0.26
VPS33A-208ENST00000543633 NOBOXO60393 691 aa13.44□□□□□ -0.26
VPS33A-208ENST00000543633 TLR5O60602 858 aa13.44□□□□□ -0.26
VPS33A-208ENST00000543633 ANGPTL1O95841 491 aa13.44□□□□□ -0.26
VPS33A-208ENST00000543633 EBLN1P0CF75 366 aa13.44□□□□□ -0.26
VPS33A-208ENST00000543633 AGXTP21549 392 aa13.44□□□□□ -0.26
VPS33A-208ENST00000543633 SLC11A2P49281 568 aa13.44□□□□□ -0.26
VPS33A-208ENST00000543633 GZMMP51124 257 aa13.44□□□□□ -0.26
VPS33A-208ENST00000543633 IST1P53990 364 aa13.44□□□□□ -0.26
VPS33A-208ENST00000543633 ABHD18Q0P651 414 aa13.44□□□□□ -0.26
VPS33A-208ENST00000543633 MRPL58Q14197 206 aaKnown RBP13.44□□□□□ -0.26
VPS33A-208ENST00000543633 AGAP7PQ5VUJ5 663 aa13.44□□□□□ -0.26
VPS33A-208ENST00000543633 LRRC8DQ7L1W4 858 aa13.44□□□□□ -0.26
VPS33A-208ENST00000543633 CHPFQ8IZ52 775 aa13.44□□□□□ -0.26
VPS33A-208ENST00000543633 TMEM132CQ8N3T6 1108 aa13.44□□□□□ -0.26
VPS33A-208ENST00000543633 RORBQ92753 470 aa13.44□□□□□ -0.26
VPS33A-208ENST00000543633 PYURFQ96I23 114 aa13.44□□□□□ -0.26
VPS33A-208ENST00000543633 ZBED2Q9BTP6 218 aa13.44□□□□□ -0.26
VPS33A-208ENST00000543633 KCNH6Q9H252 994 aa13.44□□□□□ -0.26
VPS33A-208ENST00000543633 LRTM1Q9HBL6 345 aa13.44□□□□□ -0.26
VPS33A-208ENST00000543633 RNF186Q9NXI6 227 aa13.44□□□□□ -0.26
VPS33A-208ENST00000543633 INTS6Q9UL03 887 aaKnown RBP13.44□□□□□ -0.26
VPS33A-208ENST00000543633 PKP3Q9Y446 797 aa13.44□□□□□ -0.26
VPS33A-208ENST00000543633 KRBA1A5PL33 1030 aa13.44□□□□□ -0.26
VPS33A-208ENST00000543633 CNOT3O75175 753 aaKnown RBP13.44□□□□□ -0.26
VPS33A-208ENST00000543633 FKBP9O95302 570 aa13.44□□□□□ -0.26
VPS33A-208ENST00000543633 ACPPP15309 386 aa13.44□□□□□ -0.26
VPS33A-208ENST00000543633 HOXB9P17482 250 aaPredicted RBP13.44□□□□□ -0.26
VPS33A-208ENST00000543633 IGFBP5P24593 272 aa13.44□□□□□ -0.26
VPS33A-208ENST00000543633 VEGFBP49765 207 aa13.44□□□□□ -0.26
VPS33A-208ENST00000543633 EMX1Q04741 257 aaPredicted RBP13.44□□□□□ -0.26
VPS33A-208ENST00000543633 CYP2A13Q16696 494 aa13.44□□□□□ -0.26
VPS33A-208ENST00000543633 CDKL4Q5MAI5 379 aa13.44□□□□□ -0.26
VPS33A-208ENST00000543633 SPANXN4Q5MJ08 99 aa13.44□□□□□ -0.26
VPS33A-208ENST00000543633 SYT6Q5T7P8 510 aaPredicted RBP13.44□□□□□ -0.26
VPS33A-208ENST00000543633 CXCL17Q6UXB2 119 aa13.44□□□□□ -0.26
VPS33A-208ENST00000543633 DET1Q7L5Y6 550 aa13.44□□□□□ -0.26
VPS33A-208ENST00000543633 SLCO6A1Q86UG4 719 aa13.44□□□□□ -0.26
VPS33A-208ENST00000543633 PGBD3Q8N328 593 aa13.44□□□□□ -0.26
VPS33A-208ENST00000543633 MFSD4AQ8N468 514 aa13.44□□□□□ -0.26
VPS33A-208ENST00000543633 LIX1Q8N485 282 aa13.44□□□□□ -0.26
VPS33A-208ENST00000543633 DCBLD1Q8N8Z6 715 aa13.44□□□□□ -0.26
VPS33A-208ENST00000543633 USP7Q93009 1102 aa13.44□□□□□ -0.26
VPS33A-208ENST00000543633 NCLNQ969V3 563 aa13.44□□□□□ -0.26
VPS33A-208ENST00000543633 FAM120BQ96EK7 910 aaKnown RBP13.44□□□□□ -0.26
VPS33A-208ENST00000543633 TTLL2Q9BWV7 592 aa13.44□□□□□ -0.26
VPS33A-208ENST00000543633 IKZF5Q9H5V7 419 aa13.44□□□□□ -0.26
VPS33A-208ENST00000543633 RMND5AQ9H871 391 aa13.44□□□□□ -0.26
VPS33A-208ENST00000543633 RDH14Q9HBH5 336 aa13.44□□□□□ -0.26
VPS33A-208ENST00000543633 SPC25Q9HBM1 224 aa13.44□□□□□ -0.26
VPS33A-208ENST00000543633 SCN3BQ9NY72 215 aa13.44□□□□□ -0.26
VPS33A-208ENST00000543633 IL17CQ9P0M4 197 aa13.44□□□□□ -0.26
VPS33A-208ENST00000543633 OPTCQ9UBM4 332 aa13.44□□□□□ -0.26
VPS33A-208ENST00000543633 SAMD4AQ9UPU9 718 aaKnown RBP13.44□□□□□ -0.26
VPS33A-208ENST00000543633 PER2O15055 1255 aa13.43□□□□□ -0.26
VPS33A-208ENST00000543633 B4GALT3O60512 393 aa13.43□□□□□ -0.26
VPS33A-208ENST00000543633 INMTO95050 263 aa13.43□□□□□ -0.26
VPS33A-208ENST00000543633 ZNF7P17097 686 aaPredicted RBP13.43□□□□□ -0.26
VPS33A-208ENST00000543633 SLC6A4P31645 630 aa13.43□□□□□ -0.26
VPS33A-208ENST00000543633 HALP42357 657 aa13.43□□□□□ -0.26
VPS33A-208ENST00000543633 SLC35A2P78381 396 aa13.43□□□□□ -0.26
VPS33A-208ENST00000543633 TTLL9Q3SXZ7 439 aa13.43□□□□□ -0.26
VPS33A-208ENST00000543633 CTXN3Q4LDR2 81 aa13.43□□□□□ -0.26
VPS33A-208ENST00000543633 ZNF783Q6ZMS7 281 aa13.43□□□□□ -0.26
VPS33A-208ENST00000543633 MCOLN3Q8TDD5 553 aa13.43□□□□□ -0.26
VPS33A-208ENST00000543633 C2orf15Q8WU43 125 aaKnown RBP13.43□□□□□ -0.26
VPS33A-208ENST00000543633 ITCHQ96J02 903 aa13.43□□□□□ -0.26
VPS33A-208ENST00000543633 CD244Q9BZW8 370 aa13.43□□□□□ -0.26
VPS33A-208ENST00000543633 CLPBQ9H078 707 aa13.43□□□□□ -0.26
VPS33A-208ENST00000543633 EPS8L2Q9H6S3 715 aa13.43□□□□□ -0.26
VPS33A-208ENST00000543633 CWH43Q9H720 699 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms