RNA–Protein interactions for RNA: ENST00000543397.1

SRGAP1-206, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 1 (best) BASIC

Gene SRGAP1, Length 5,652 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-206ENST00000543397 OR10T2Q8NGX3 314 aa6.77□□□□□ -1.33
SRGAP1-206ENST00000543397 PHOSPHO2Q8TCD6 241 aa6.77□□□□□ -1.33
SRGAP1-206ENST00000543397 TFGQ92734 400 aaPredicted RBP6.77□□□□□ -1.33
SRGAP1-206ENST00000543397 RAB7BQ96AH8 199 aa6.77□□□□□ -1.33
SRGAP1-206ENST00000543397 ZNF354BQ96LW1 612 aa6.77□□□□□ -1.33
SRGAP1-206ENST00000543397 TEFMQ96QE5 360 aaKnown RBP6.77□□□□□ -1.33
SRGAP1-206ENST00000543397 ARHGAP9Q9BRR9 750 aa6.77□□□□□ -1.33
SRGAP1-206ENST00000543397 EFCAB11Q9BUY7 163 aa6.77□□□□□ -1.33
SRGAP1-206ENST00000543397 FLRT1Q9NZU1 646 aa6.77□□□□□ -1.33
SRGAP1-206ENST00000543397 CHD4Q14839 1912 aa6.77□□□□□ -1.33
SRGAP1-206ENST00000543397 SMIM31A0A1B0GVY4 71 aa6.77□□□□□ -1.33
SRGAP1-206ENST00000543397 ZNF840PA6NDX5 716 aa6.77□□□□□ -1.33
SRGAP1-206ENST00000543397 A8MU76 341 aa6.77□□□□□ -1.33
SRGAP1-206ENST00000543397 METTL18O95568 372 aa6.77□□□□□ -1.33
SRGAP1-206ENST00000543397 UROSP10746 265 aa6.77□□□□□ -1.33
SRGAP1-206ENST00000543397 RPL10P27635 214 aaKnown RBP6.77□□□□□ -1.33
SRGAP1-206ENST00000543397 CCR8P51685 355 aa6.77□□□□□ -1.33
SRGAP1-206ENST00000543397 GDF10P55107 478 aa6.77□□□□□ -1.33
SRGAP1-206ENST00000543397 WDR5P61964 334 aaKnown RBP6.77□□□□□ -1.33
SRGAP1-206ENST00000543397 LGALS3BPQ08380 585 aa6.77□□□□□ -1.33
SRGAP1-206ENST00000543397 PIN1Q13526 163 aaPredicted RBP6.77□□□□□ -1.33
SRGAP1-206ENST00000543397 ELOCQ15369 112 aa6.77□□□□□ -1.33
SRGAP1-206ENST00000543397 SIRPB2Q5JXA9 342 aa6.77□□□□□ -1.33
SRGAP1-206ENST00000543397 MLIPQ5VWP3 458 aa6.77□□□□□ -1.33
SRGAP1-206ENST00000543397 FAM171BQ6P995 826 aa6.77□□□□□ -1.33
SRGAP1-206ENST00000543397 ZMIZ2Q8NF64 920 aa6.77□□□□□ -1.33
SRGAP1-206ENST00000543397 SMPDL3AQ92484 453 aa6.77□□□□□ -1.33
SRGAP1-206ENST00000543397 NCSTNQ92542 709 aa6.77□□□□□ -1.33
SRGAP1-206ENST00000543397 TBC1D20Q96BZ9 403 aa6.77□□□□□ -1.33
SRGAP1-206ENST00000543397 LRIG1Q96JA1 1093 aa6.77□□□□□ -1.33
SRGAP1-206ENST00000543397 PAAF1Q9BRP4 392 aa6.77□□□□□ -1.33
SRGAP1-206ENST00000543397 PNPOQ9NVS9 261 aa6.77□□□□□ -1.33
SRGAP1-206ENST00000543397 DLGAP2Q9P1A6 1054 aa6.77□□□□□ -1.33
SRGAP1-206ENST00000543397 SLC17A7Q9P2U7 560 aa6.77□□□□□ -1.33
SRGAP1-206ENST00000543397 B4GALT6Q9UBX8 382 aa6.77□□□□□ -1.33
SRGAP1-206ENST00000543397 AJAP1Q9UKB5 411 aaPredicted RBP6.77□□□□□ -1.33
SRGAP1-206ENST00000543397 CLCA3PQ9Y6N3 262 aa6.77□□□□□ -1.33
SRGAP1-206ENST00000543397 IGKV6D-21A0A0A0MT36 114 aa6.77□□□□□ -1.33
SRGAP1-206ENST00000543397 A0A0J9YVX5 310 aa6.77□□□□□ -1.33
SRGAP1-206ENST00000543397 A0A0J9YYE9 177 aa6.77□□□□□ -1.33
SRGAP1-206ENST00000543397 TTC24A2A3L6 582 aaPredicted RBP6.77□□□□□ -1.33
SRGAP1-206ENST00000543397 PAK4O96013 591 aaPredicted RBP6.77□□□□□ -1.33
SRGAP1-206ENST00000543397 TSPAN19P0C672 248 aa6.77□□□□□ -1.33
SRGAP1-206ENST00000543397 ATP1B2P14415 290 aaPredicted RBP6.77□□□□□ -1.33
SRGAP1-206ENST00000543397 HOXC12P31275 282 aa6.77□□□□□ -1.33
SRGAP1-206ENST00000543397 AP1S2P56377 157 aa6.77□□□□□ -1.33
SRGAP1-206ENST00000543397 RPP38P78345 283 aaKnown RBP6.77□□□□□ -1.33
SRGAP1-206ENST00000543397 SPIBQ01892 262 aa6.77□□□□□ -1.33
SRGAP1-206ENST00000543397 DYNC1I2Q13409 638 aaKnown RBP6.77□□□□□ -1.33
SRGAP1-206ENST00000543397 ELAVL3Q14576 367 aaKnown RBP6.77□□□□□ -1.33
SRGAP1-206ENST00000543397 FASTKD3Q14CZ7 662 aaKnown RBP6.77□□□□□ -1.33
SRGAP1-206ENST00000543397 KCTD19Q17RG1 926 aaPredicted RBP6.77□□□□□ -1.33
SRGAP1-206ENST00000543397 FBXO43Q4G163 708 aa6.77□□□□□ -1.33
SRGAP1-206ENST00000543397 PRAMEF14Q5SWL7 426 aa6.77□□□□□ -1.33
SRGAP1-206ENST00000543397 PRAMEF13Q5VWM6 474 aa6.77□□□□□ -1.33
SRGAP1-206ENST00000543397 TTC27Q6P3X3 843 aa6.77□□□□□ -1.33
SRGAP1-206ENST00000543397 CAMKVQ8NCB2 501 aa6.77□□□□□ -1.33
SRGAP1-206ENST00000543397 OR2T12Q8NG77 320 aa6.77□□□□□ -1.33
SRGAP1-206ENST00000543397 CENPIQ92674 756 aaPredicted RBP6.77□□□□□ -1.33
SRGAP1-206ENST00000543397 RIT1Q92963 219 aa6.77□□□□□ -1.33
SRGAP1-206ENST00000543397 RCN3Q96D15 328 aa6.77□□□□□ -1.33
SRGAP1-206ENST00000543397 MTERF3Q96E29 417 aa6.77□□□□□ -1.33
SRGAP1-206ENST00000543397 HBEGFQ99075 208 aa6.77□□□□□ -1.33
SRGAP1-206ENST00000543397 TAPBPLQ9BX59 468 aa6.77□□□□□ -1.33
SRGAP1-206ENST00000543397 ADAM19Q9H013 955 aa6.77□□□□□ -1.33
SRGAP1-206ENST00000543397 RACGAP1Q9H0H5 632 aa6.77□□□□□ -1.33
SRGAP1-206ENST00000543397 NECTIN3Q9NQS3 549 aa6.77□□□□□ -1.33
SRGAP1-206ENST00000543397 SAMHD1Q9Y3Z3 626 aaKnown RBP6.77□□□□□ -1.33
SRGAP1-206ENST00000543397 OR51F1A6NGY5 319 aa6.77□□□□□ -1.33
SRGAP1-206ENST00000543397 GRID2O43424 1007 aa6.77□□□□□ -1.33
SRGAP1-206ENST00000543397 SNX3O60493 162 aa6.77□□□□□ -1.33
SRGAP1-206ENST00000543397 ICMTO60725 284 aa6.77□□□□□ -1.33
SRGAP1-206ENST00000543397 PRAMEF11O60813 436 aa6.77□□□□□ -1.33
SRGAP1-206ENST00000543397 NIPSNAP2O75323 286 aa6.77□□□□□ -1.33
SRGAP1-206ENST00000543397 OR4F21O95013 312 aa6.77□□□□□ -1.33
SRGAP1-206ENST00000543397 RYKP34925 604 aa6.77□□□□□ -1.33
SRGAP1-206ENST00000543397 VIPR2P41587 438 aa6.77□□□□□ -1.33
SRGAP1-206ENST00000543397 RGS8P57771 180 aaPredicted RBP6.77□□□□□ -1.33
SRGAP1-206ENST00000543397 RPS21P63220 83 aaKnown RBP6.77□□□□□ -1.33
SRGAP1-206ENST00000543397 SLC25A3Q00325 362 aa6.77□□□□□ -1.33
SRGAP1-206ENST00000543397 TNK2Q07912 1038 aa6.77□□□□□ -1.33
SRGAP1-206ENST00000543397 WASHC2DQ5SRD0 308 aa6.77□□□□□ -1.33
SRGAP1-206ENST00000543397 PIK3R6Q5UE93 754 aa6.77□□□□□ -1.33
SRGAP1-206ENST00000543397 CADM2Q8N3J6 435 aa6.77□□□□□ -1.33
SRGAP1-206ENST00000543397 CPSF7Q8N684 471 aaKnown RBP6.77□□□□□ -1.33
SRGAP1-206ENST00000543397 NAXEQ8NCW5 288 aa6.77□□□□□ -1.33
SRGAP1-206ENST00000543397 ATP6V1C2Q8NEY4 427 aa6.77□□□□□ -1.33
SRGAP1-206ENST00000543397 ZNF641Q96N77 438 aaPredicted RBP6.77□□□□□ -1.33
SRGAP1-206ENST00000543397 OLFM1Q99784 485 aa6.77□□□□□ -1.33
SRGAP1-206ENST00000543397 GPR174Q9BXC1 333 aa6.77□□□□□ -1.33
SRGAP1-206ENST00000543397 SLC2A11Q9BYW1 496 aa6.77□□□□□ -1.33
SRGAP1-206ENST00000543397 STRADBQ9C0K7 418 aa6.77□□□□□ -1.33
SRGAP1-206ENST00000543397 KLHL25Q9H0H3 589 aa6.77□□□□□ -1.33
SRGAP1-206ENST00000543397 SLCO1B3Q9NPD5 702 aa6.77□□□□□ -1.33
SRGAP1-206ENST00000543397 ACTR10Q9NZ32 417 aa6.77□□□□□ -1.33
SRGAP1-206ENST00000543397 CFAP20Q9Y6A4 193 aaKnown RBP6.77□□□□□ -1.33
SRGAP1-206ENST00000543397 ARFGEF2Q9Y6D5 1785 aa6.77□□□□□ -1.33
SRGAP1-206ENST00000543397 A0A1W2PP55 124 aa6.76□□□□□ -1.33
SRGAP1-206ENST00000543397 MAGEA13PA6NCF6 341 aa6.76□□□□□ -1.33
SRGAP1-206ENST00000543397 K7EPI3 171 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms