RNA–Protein interactions for RNA: ENST00000543140.5

COL4A1-204, Transcript of collagen type IV alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A1, Length 2,547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1-204ENST00000543140 PSMA4P25789 261 aaKnown RBP15.94■□□□□ 0.14
COL4A1-204ENST00000543140 ABRQ12979 859 aa15.94■□□□□ 0.14
COL4A1-204ENST00000543140 GBX1Q14549 363 aa15.94■□□□□ 0.14
COL4A1-204ENST00000543140 INPP5AQ14642 412 aa15.94■□□□□ 0.14
COL4A1-204ENST00000543140 ACOX1Q15067 660 aa15.94■□□□□ 0.14
COL4A1-204ENST00000543140 CYP51A1Q16850 503 aa15.94■□□□□ 0.14
COL4A1-204ENST00000543140 FAM174BQ3ZCQ3 159 aa15.94■□□□□ 0.14
COL4A1-204ENST00000543140 HENMT1Q5T8I9 393 aaKnown RBP15.94■□□□□ 0.14
COL4A1-204ENST00000543140 NEK5Q6P3R8 708 aa15.94■□□□□ 0.14
COL4A1-204ENST00000543140 RTL10Q7L3V2 364 aa15.94■□□□□ 0.14
COL4A1-204ENST00000543140 TRIM46Q7Z4K8 759 aa15.94■□□□□ 0.14
COL4A1-204ENST00000543140 HID1Q8IV36 788 aa15.94■□□□□ 0.14
COL4A1-204ENST00000543140 AQP12AQ8IXF9 295 aa15.94■□□□□ 0.14
COL4A1-204ENST00000543140 C7orf61Q8IZ16 206 aa15.94■□□□□ 0.14
COL4A1-204ENST00000543140 LILRA3Q8N6C8 439 aaPredicted RBP15.94■□□□□ 0.14
COL4A1-204ENST00000543140 NXPE3Q969Y0 559 aa15.94■□□□□ 0.14
COL4A1-204ENST00000543140 ALPK3Q96L96 1907 aa15.94■□□□□ 0.14
COL4A1-204ENST00000543140 ZNF197O14709 1029 aa15.94■□□□□ 0.14
COL4A1-204ENST00000543140 TULP3O75386 442 aa15.94■□□□□ 0.14
COL4A1-204ENST00000543140 HLA-EP13747 358 aa15.94■□□□□ 0.14
COL4A1-204ENST00000543140 JAK1P23458 1154 aa15.94■□□□□ 0.14
COL4A1-204ENST00000543140 OR4D2P58180 307 aa15.94■□□□□ 0.14
COL4A1-204ENST00000543140 SUSD1Q6UWL2 747 aa15.94■□□□□ 0.14
COL4A1-204ENST00000543140 ADGRD2Q7Z7M1 963 aa15.94■□□□□ 0.14
COL4A1-204ENST00000543140 MARVELD2Q8N4S9 558 aa15.94■□□□□ 0.14
COL4A1-204ENST00000543140 CELF5Q8N6W0 485 aaKnown RBP15.94■□□□□ 0.14
COL4A1-204ENST00000543140 HERVK_113Q902F9 699 aa15.94■□□□□ 0.14
COL4A1-204ENST00000543140 SMG7Q92540 1137 aaKnown RBP15.94■□□□□ 0.14
COL4A1-204ENST00000543140 UHRF1Q96T88 793 aaPredicted RBP15.94■□□□□ 0.14
COL4A1-204ENST00000543140 ACPTQ9BZG2 426 aa15.94■□□□□ 0.14
COL4A1-204ENST00000543140 ARMC1Q9NVT9 282 aa15.94■□□□□ 0.14
COL4A1-204ENST00000543140 SMOXQ9NWM0 555 aa15.94■□□□□ 0.14
COL4A1-204ENST00000543140 TCF20Q9UGU0 1960 aaKnown RBP15.93■□□□□ 0.14
COL4A1-204ENST00000543140 SAC3D1A6NKF1 404 aa15.93■□□□□ 0.14
COL4A1-204ENST00000543140 KRT6AP02538 564 aa15.93■□□□□ 0.14
COL4A1-204ENST00000543140 KRT6BP04259 564 aa15.93■□□□□ 0.14
COL4A1-204ENST00000543140 ELFN1P0C7U0 828 aa15.93■□□□□ 0.14
COL4A1-204ENST00000543140 SLC6A11P48066 632 aa15.93■□□□□ 0.14
COL4A1-204ENST00000543140 PREPP48147 710 aa15.93■□□□□ 0.14
COL4A1-204ENST00000543140 KRT6CP48668 564 aa15.93■□□□□ 0.14
COL4A1-204ENST00000543140 CTSCP53634 463 aa15.93■□□□□ 0.14
COL4A1-204ENST00000543140 ZNF284Q2VY69 593 aa15.93■□□□□ 0.14
COL4A1-204ENST00000543140 PLEKHS1Q5SXH7 462 aa15.93■□□□□ 0.14
COL4A1-204ENST00000543140 METTL2BQ6P1Q9 378 aaKnown RBP15.93■□□□□ 0.14
COL4A1-204ENST00000543140 PARS2Q7L3T8 475 aaKnown RBP15.93■□□□□ 0.14
COL4A1-204ENST00000543140 DPP10Q8N608 796 aa15.93■□□□□ 0.14
COL4A1-204ENST00000543140 MCOLN3Q8TDD5 553 aa15.93■□□□□ 0.14
COL4A1-204ENST00000543140 SELENOMQ8WWX9 145 aa15.93■□□□□ 0.14
COL4A1-204ENST00000543140 USP7Q93009 1102 aa15.93■□□□□ 0.14
COL4A1-204ENST00000543140 DPY30Q9C005 99 aa15.93■□□□□ 0.14
COL4A1-204ENST00000543140 CERS4Q9HA82 394 aa15.93■□□□□ 0.14
COL4A1-204ENST00000543140 COQ6Q9Y2Z9 468 aa15.93■□□□□ 0.14
COL4A1-204ENST00000543140 OTOL1A6NHN0 477 aaPredicted RBP15.93■□□□□ 0.14
COL4A1-204ENST00000543140 PRRT4C9JH25 899 aa15.93■□□□□ 0.14
COL4A1-204ENST00000543140 GFYI3L273 518 aa15.93■□□□□ 0.14
COL4A1-204ENST00000543140 TSPAN6O43657 245 aa15.93■□□□□ 0.14
COL4A1-204ENST00000543140 MT-ND1P03886 318 aa15.93■□□□□ 0.14
COL4A1-204ENST00000543140 ENO2P09104 434 aaPredicted RBP15.93■□□□□ 0.14
COL4A1-204ENST00000543140 IL10P22301 178 aa15.93■□□□□ 0.14
COL4A1-204ENST00000543140 ST8SIA6P61647 398 aa15.93■□□□□ 0.14
COL4A1-204ENST00000543140 UBE3AQ05086 875 aa15.93■□□□□ 0.14
COL4A1-204ENST00000543140 KIAA0040Q15053 153 aa15.93■□□□□ 0.14
COL4A1-204ENST00000543140 SPANXN4Q5MJ08 99 aa15.93■□□□□ 0.14
COL4A1-204ENST00000543140 DNAJC14Q6Y2X3 702 aaPredicted RBP15.93■□□□□ 0.14
COL4A1-204ENST00000543140 ERMP1Q7Z2K6 904 aa15.93■□□□□ 0.14
COL4A1-204ENST00000543140 ADGRG5Q8IZF4 528 aa15.93■□□□□ 0.14
COL4A1-204ENST00000543140 ST13P4Q8IZP2 240 aaPredicted RBP15.93■□□□□ 0.14
COL4A1-204ENST00000543140 TRAM1L1Q8N609 369 aa15.93■□□□□ 0.14
COL4A1-204ENST00000543140 RASGEF1AQ8N9B8 481 aa15.93■□□□□ 0.14
COL4A1-204ENST00000543140 ASZ1Q8WWH4 475 aa15.93■□□□□ 0.14
COL4A1-204ENST00000543140 AP2M1Q96CW1 435 aa15.93■□□□□ 0.14
COL4A1-204ENST00000543140 GBP5Q96PP8 586 aa15.93■□□□□ 0.14
COL4A1-204ENST00000543140 ZBTB18Q99592 522 aa15.93■□□□□ 0.14
COL4A1-204ENST00000543140 CGREF1Q99674 301 aa15.93■□□□□ 0.14
COL4A1-204ENST00000543140 ZSCAN5AQ9BUG6 496 aa15.93■□□□□ 0.14
COL4A1-204ENST00000543140 ELOVL6Q9H5J4 265 aa15.93■□□□□ 0.14
COL4A1-204ENST00000543140 C1orf109Q9NX04 203 aa15.93■□□□□ 0.14
COL4A1-204ENST00000543140 FBXO10Q9UK96 956 aa15.93■□□□□ 0.14
COL4A1-204ENST00000543140 EIF3FO00303 357 aaPredicted RBP15.92■□□□□ 0.14
COL4A1-204ENST00000543140 PLK4O00444 970 aa15.92■□□□□ 0.14
COL4A1-204ENST00000543140 DFNA5O60443 496 aa15.92■□□□□ 0.14
COL4A1-204ENST00000543140 PRAMEF4O60810 478 aa15.92■□□□□ 0.14
COL4A1-204ENST00000543140 MPC1LP0DKB6 136 aa15.92■□□□□ 0.14
COL4A1-204ENST00000543140 CYP2A7P20853 494 aa15.92■□□□□ 0.14
COL4A1-204ENST00000543140 PBLDP30039 288 aaPredicted RBP15.92■□□□□ 0.14
COL4A1-204ENST00000543140 MMP12P39900 470 aa15.92■□□□□ 0.14
COL4A1-204ENST00000543140 EEFSECP57772 596 aaKnown RBP15.92■□□□□ 0.14
COL4A1-204ENST00000543140 DCDC1P59894 354 aa15.92■□□□□ 0.14
COL4A1-204ENST00000543140 PRKCQQ04759 706 aa15.92■□□□□ 0.14
COL4A1-204ENST00000543140 CACHD1Q5VU97 1274 aa15.92■□□□□ 0.14
COL4A1-204ENST00000543140 PRAMEF9Q5VWM5 478 aa15.92■□□□□ 0.14
COL4A1-204ENST00000543140 FAM109BQ6ICB4 259 aaPredicted RBP15.92■□□□□ 0.14
COL4A1-204ENST00000543140 LIPIQ6XZB0 460 aa15.92■□□□□ 0.14
COL4A1-204ENST00000543140 ZBTB49Q6ZSB9 765 aa15.92■□□□□ 0.14
COL4A1-204ENST00000543140 DPPA4Q7L190 304 aa15.92■□□□□ 0.14
COL4A1-204ENST00000543140 LRRC70Q7Z2Q7 622 aa15.92■□□□□ 0.14
COL4A1-204ENST00000543140 SFTPA1Q8IWL2 248 aa15.92■□□□□ 0.14
COL4A1-204ENST00000543140 RAVER1Q8IY67 606 aaKnown RBP15.92■□□□□ 0.14
COL4A1-204ENST00000543140 RNF175Q8N4F7 328 aa15.92■□□□□ 0.14
COL4A1-204ENST00000543140 BTN2A2Q8WVV5 523 aa15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms