RNA–Protein interactions for RNA: ENST00000543123.1

RTN3-212, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 712 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-212ENST00000543123 PCMTD2Q9NV79 361 aa12.7□□□□□ -0.38
RTN3-212ENST00000543123 PAK5Q9P286 719 aa12.7□□□□□ -0.38
RTN3-212ENST00000543123 ANAPC5Q9UJX4 755 aa12.7□□□□□ -0.38
RTN3-212ENST00000543123 SRPK3Q9UPE1 567 aa12.7□□□□□ -0.38
RTN3-212ENST00000543123 ICKQ9UPZ9 632 aa12.7□□□□□ -0.38
RTN3-212ENST00000543123 TDRKHQ9Y2W6 561 aaKnown RBP12.7□□□□□ -0.38
RTN3-212ENST00000543123 CAPN6Q9Y6Q1 641 aa12.7□□□□□ -0.38
RTN3-212ENST00000543123 PIKFYVEQ9Y2I7 2098 aa12.69□□□□□ -0.38
RTN3-212ENST00000543123 A0A0J9YY10 115 aa12.69□□□□□ -0.38
RTN3-212ENST00000543123 TCRBV7S2A1N4TA0A589 114 aa12.69□□□□□ -0.38
RTN3-212ENST00000543123 AP3B1O00203 1094 aa12.69□□□□□ -0.38
RTN3-212ENST00000543123 DNAJB5O75953 348 aa12.69□□□□□ -0.38
RTN3-212ENST00000543123 OR2B3O76000 313 aa12.69□□□□□ -0.38
RTN3-212ENST00000543123 CHRM5P08912 532 aaPredicted RBP12.69□□□□□ -0.38
RTN3-212ENST00000543123 UGT2B7P16662 529 aa12.69□□□□□ -0.38
RTN3-212ENST00000543123 NR1D1P20393 614 aa12.69□□□□□ -0.38
RTN3-212ENST00000543123 ACADLP28330 430 aa12.69□□□□□ -0.38
RTN3-212ENST00000543123 KIR2DS3Q14952 304 aa12.69□□□□□ -0.38
RTN3-212ENST00000543123 BRD3Q15059 726 aa12.69□□□□□ -0.38
RTN3-212ENST00000543123 TMED2Q15363 201 aa12.69□□□□□ -0.38
RTN3-212ENST00000543123 OASLQ15646 514 aaKnown RBP12.69□□□□□ -0.38
RTN3-212ENST00000543123 IGFBP7Q16270 282 aa12.69□□□□□ -0.38
RTN3-212ENST00000543123 FASTKD1Q53R41 847 aaKnown RBP12.69□□□□□ -0.38
RTN3-212ENST00000543123 ZNF789Q5FWF6 425 aa12.69□□□□□ -0.38
RTN3-212ENST00000543123 TSTD2Q5T7W7 516 aa12.69□□□□□ -0.38
RTN3-212ENST00000543123 CPZQ66K79 652 aa12.69□□□□□ -0.38
RTN3-212ENST00000543123 FAM198BQ6UWH4 519 aa12.69□□□□□ -0.38
RTN3-212ENST00000543123 C4orf22Q6V702 233 aa12.69□□□□□ -0.38
RTN3-212ENST00000543123 UNC5AQ6ZN44 842 aa12.69□□□□□ -0.38
RTN3-212ENST00000543123 CDHR3Q6ZTQ4 885 aa12.69□□□□□ -0.38
RTN3-212ENST00000543123 MED25Q71SY5 747 aa12.69□□□□□ -0.38
RTN3-212ENST00000543123 TMEM102Q8N9M5 508 aaPredicted RBP12.69□□□□□ -0.38
RTN3-212ENST00000543123 OR13J1Q8NGT2 312 aa12.69□□□□□ -0.38
RTN3-212ENST00000543123 OR6P1Q8NGX9 317 aa12.69□□□□□ -0.38
RTN3-212ENST00000543123 OR4L1Q8NH43 312 aa12.69□□□□□ -0.38
RTN3-212ENST00000543123 GSDMBQ8TAX9 411 aa12.69□□□□□ -0.38
RTN3-212ENST00000543123 PROKR1Q8TCW9 393 aa12.69□□□□□ -0.38
RTN3-212ENST00000543123 ASZ1Q8WWH4 475 aa12.69□□□□□ -0.38
RTN3-212ENST00000543123 HDAC10Q969S8 669 aa12.69□□□□□ -0.38
RTN3-212ENST00000543123 SGSM3Q96HU1 749 aa12.69□□□□□ -0.38
RTN3-212ENST00000543123 ETNK1Q9HBU6 452 aa12.69□□□□□ -0.38
RTN3-212ENST00000543123 RAB6BQ9NRW1 208 aa12.69□□□□□ -0.38
RTN3-212ENST00000543123 GPN3Q9UHW5 284 aaPredicted RBP12.69□□□□□ -0.38
RTN3-212ENST00000543123 ZNF451Q9Y4E5 1061 aa12.69□□□□□ -0.38
RTN3-212ENST00000543123 SLC5A10A0PJK1 596 aa12.68□□□□□ -0.38
RTN3-212ENST00000543123 OR51F1A6NGY5 319 aa12.68□□□□□ -0.38
RTN3-212ENST00000543123 ZSCAN9O15535 394 aaPredicted RBP12.68□□□□□ -0.38
RTN3-212ENST00000543123 ZNF749O43361 778 aa12.68□□□□□ -0.38
RTN3-212ENST00000543123 KLHL41O60662 606 aa12.68□□□□□ -0.38
RTN3-212ENST00000543123 TMEM63AO94886 807 aa12.68□□□□□ -0.38
RTN3-212ENST00000543123 GOT2P00505 430 aaKnown RBP12.68□□□□□ -0.38
RTN3-212ENST00000543123 IGHEP01854 428 aa12.68□□□□□ -0.38
RTN3-212ENST00000543123 APOA4P06727 396 aa12.68□□□□□ -0.38
RTN3-212ENST00000543123 APRTP07741 180 aa12.68□□□□□ -0.38
RTN3-212ENST00000543123 PVRP15151 417 aa12.68□□□□□ -0.38
RTN3-212ENST00000543123 PTGIRP43119 386 aa12.68□□□□□ -0.38
RTN3-212ENST00000543123 CD97P48960 835 aa12.68□□□□□ -0.38
RTN3-212ENST00000543123 TTPAP49638 278 aa12.68□□□□□ -0.38
RTN3-212ENST00000543123 CCL11P51671 97 aa12.68□□□□□ -0.38
RTN3-212ENST00000543123 ACVR1Q04771 509 aa12.68□□□□□ -0.38
RTN3-212ENST00000543123 UBAP2LQ14157 1087 aaKnown RBP12.68□□□□□ -0.38
RTN3-212ENST00000543123 SLC5A12Q1EHB4 618 aa12.68□□□□□ -0.38
RTN3-212ENST00000543123 COLEC12Q5KU26 742 aa12.68□□□□□ -0.38
RTN3-212ENST00000543123 PAPD7Q5XG87 772 aaKnown RBP12.68□□□□□ -0.38
RTN3-212ENST00000543123 SLC13A5Q86YT5 568 aaPredicted RBP12.68□□□□□ -0.38
RTN3-212ENST00000543123 SLC22A15Q8IZD6 547 aa12.68□□□□□ -0.38
RTN3-212ENST00000543123 SPC24Q8NBT2 197 aa12.68□□□□□ -0.38
RTN3-212ENST00000543123 ADAMTS17Q8TE56 1095 aa12.68□□□□□ -0.38
RTN3-212ENST00000543123 DENND1AQ8TEH3 1009 aa12.68□□□□□ -0.38
RTN3-212ENST00000543123 MIB2Q96AX9 1013 aa12.68□□□□□ -0.38
RTN3-212ENST00000543123 SLC22A18Q96BI1 424 aa12.68□□□□□ -0.38
RTN3-212ENST00000543123 TRIM55Q9BYV6 548 aa12.68□□□□□ -0.38
RTN3-212ENST00000543123 KLHL25Q9H0H3 589 aa12.68□□□□□ -0.38
RTN3-212ENST00000543123 TXLNGQ9NUQ3 528 aa12.68□□□□□ -0.38
RTN3-212ENST00000543123 IRAK4Q9NWZ3 460 aa12.68□□□□□ -0.38
RTN3-212ENST00000543123 TCAF1Q9Y4C2 921 aa12.68□□□□□ -0.38
RTN3-212ENST00000543123 MRFAP1Q9Y605 127 aa12.68□□□□□ -0.38
RTN3-212ENST00000543123 PRSS21Q9Y6M0 314 aa12.68□□□□□ -0.38
RTN3-212ENST00000543123 PRRC2CQ9Y520 2896 aaKnown RBP12.67□□□□□ -0.38
RTN3-212ENST00000543123 TTLL8A6PVC2 850 aa12.67□□□□□ -0.38
RTN3-212ENST00000543123 ISM1B1AKI9 464 aa12.67□□□□□ -0.38
RTN3-212ENST00000543123 K7EM74 188 aa12.67□□□□□ -0.38
RTN3-212ENST00000543123 DPM1O60762 260 aa12.67□□□□□ -0.38
RTN3-212ENST00000543123 VPS4BO75351 444 aa12.67□□□□□ -0.38
RTN3-212ENST00000543123 VARSP26640 1264 aaKnown RBP12.67□□□□□ -0.38
RTN3-212ENST00000543123 RAB28P51157 221 aa12.67□□□□□ -0.38
RTN3-212ENST00000543123 CHAF1BQ13112 559 aa12.67□□□□□ -0.38
RTN3-212ENST00000543123 RPS6KA1Q15418 735 aa12.67□□□□□ -0.38
RTN3-212ENST00000543123 PTCHD3Q3KNS1 767 aa12.67□□□□□ -0.38
RTN3-212ENST00000543123 PRAMEF17Q5VTA0 474 aa12.67□□□□□ -0.38
RTN3-212ENST00000543123 RHBDD2Q6NTF9 364 aa12.67□□□□□ -0.38
RTN3-212ENST00000543123 TLDC1Q6P9B6 456 aa12.67□□□□□ -0.38
RTN3-212ENST00000543123 TTC23LQ6PF05 361 aa12.67□□□□□ -0.38
RTN3-212ENST00000543123 UNC5DQ6UXZ4 953 aa12.67□□□□□ -0.38
RTN3-212ENST00000543123 TRIM73Q86UV7 250 aa12.67□□□□□ -0.38
RTN3-212ENST00000543123 DCUN1D3Q8IWE4 304 aa12.67□□□□□ -0.38
RTN3-212ENST00000543123 RAB42Q8N4Z0 105 aa12.67□□□□□ -0.38
RTN3-212ENST00000543123 FAM26EQ8N5C1 309 aa12.67□□□□□ -0.38
RTN3-212ENST00000543123 MAIP1Q8WWC4 291 aa12.67□□□□□ -0.38
RTN3-212ENST00000543123 OR2A14Q96R47 310 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms