RNA–Protein interactions for RNA: ENST00000542552.1

ECHDC2-223, Transcript of enoyl-CoA hydratase domain containing 2, humanhuman

TSL 1 (best)

Gene ECHDC2, Length 981 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC2-223ENST00000542552 CTBP1Q13363 440 aa14.97□□□□□ -0.01
ECHDC2-223ENST00000542552 THOC5Q13769 683 aaKnown RBP14.97□□□□□ -0.01
ECHDC2-223ENST00000542552 MAP7Q14244 749 aa14.97□□□□□ -0.01
ECHDC2-223ENST00000542552 CRYMQ14894 314 aa14.97□□□□□ -0.01
ECHDC2-223ENST00000542552 KYNUQ16719 465 aa14.97□□□□□ -0.01
ECHDC2-223ENST00000542552 MANEAQ5SRI9 462 aa14.97□□□□□ -0.01
ECHDC2-223ENST00000542552 CYB5D1Q6P9G0 228 aa14.97□□□□□ -0.01
ECHDC2-223ENST00000542552 FBXO38Q6PIJ6 1188 aa14.97□□□□□ -0.01
ECHDC2-223ENST00000542552 OTOAQ7RTW8 1153 aa14.97□□□□□ -0.01
ECHDC2-223ENST00000542552 BPHLQ86WA6 291 aaPredicted RBP14.97□□□□□ -0.01
ECHDC2-223ENST00000542552 IGDCC3Q8IVU1 814 aa14.97□□□□□ -0.01
ECHDC2-223ENST00000542552 DENND6AQ8IWF6 608 aa14.97□□□□□ -0.01
ECHDC2-223ENST00000542552 UNC5BQ8IZJ1 945 aa14.97□□□□□ -0.01
ECHDC2-223ENST00000542552 CACNA2D3Q8IZS8 1091 aa14.97□□□□□ -0.01
ECHDC2-223ENST00000542552 SERBP1Q8NC51 408 aaKnown RBP eCLIP14.97□□□□□ -0.01
ECHDC2-223ENST00000542552 FLVCR1-AS1Q8TAF5 88 aa14.97□□□□□ -0.01
ECHDC2-223ENST00000542552 FCRL4Q96PJ5 515 aa14.97□□□□□ -0.01
ECHDC2-223ENST00000542552 KRT12Q99456 494 aa14.97□□□□□ -0.01
ECHDC2-223ENST00000542552 PLAC1Q9HBJ0 212 aa14.97□□□□□ -0.01
ECHDC2-223ENST00000542552 C20orf96Q9NUD7 363 aaPredicted RBP14.97□□□□□ -0.01
ECHDC2-223ENST00000542552 ACTR10Q9NZ32 417 aa14.97□□□□□ -0.01
ECHDC2-223ENST00000542552 GALPQ9UBC7 116 aa14.97□□□□□ -0.01
ECHDC2-223ENST00000542552 TDRKHQ9Y2W6 561 aaKnown RBP14.97□□□□□ -0.01
ECHDC2-223ENST00000542552 CACNA1GO43497 2377 aa14.96□□□□□ -0.01
ECHDC2-223ENST00000542552 PIPSLA2A3N6 862 aa14.96□□□□□ -0.01
ECHDC2-223ENST00000542552 SLC9B1P1A6NJY1 282 aa14.96□□□□□ -0.01
ECHDC2-223ENST00000542552 BANF1O75531 89 aa14.96□□□□□ -0.01
ECHDC2-223ENST00000542552 SPAG6O75602 509 aa14.96□□□□□ -0.01
ECHDC2-223ENST00000542552 TTC4O95801 387 aa14.96□□□□□ -0.01
ECHDC2-223ENST00000542552 RPN2P04844 631 aa14.96□□□□□ -0.01
ECHDC2-223ENST00000542552 CHRM5P08912 532 aaPredicted RBP14.96□□□□□ -0.01
ECHDC2-223ENST00000542552 MSL3P1P0C860 447 aa14.96□□□□□ -0.01
ECHDC2-223ENST00000542552 ZNF28P17035 718 aa14.96□□□□□ -0.01
ECHDC2-223ENST00000542552 CDH3P22223 829 aa14.96□□□□□ -0.01
ECHDC2-223ENST00000542552 ATP5DP30049 168 aa14.96□□□□□ -0.01
ECHDC2-223ENST00000542552 CASQ1P31415 396 aa14.96□□□□□ -0.01
ECHDC2-223ENST00000542552 SLC1A2P43004 574 aa14.96□□□□□ -0.01
ECHDC2-223ENST00000542552 TUBB4BP68371 445 aa14.96□□□□□ -0.01
ECHDC2-223ENST00000542552 ACY1Q03154 408 aa14.96□□□□□ -0.01
ECHDC2-223ENST00000542552 TUBB3Q13509 450 aa14.96□□□□□ -0.01
ECHDC2-223ENST00000542552 TUBB2AQ13885 445 aa14.96□□□□□ -0.01
ECHDC2-223ENST00000542552 HSP90AA5PQ58FG0 334 aa14.96□□□□□ -0.01
ECHDC2-223ENST00000542552 ZNF549Q6P9A3 640 aa14.96□□□□□ -0.01
ECHDC2-223ENST00000542552 SPESP1Q6UW49 350 aa14.96□□□□□ -0.01
ECHDC2-223ENST00000542552 SYT10Q6XYQ8 523 aa14.96□□□□□ -0.01
ECHDC2-223ENST00000542552 PPP1R3BQ86XI6 285 aa14.96□□□□□ -0.01
ECHDC2-223ENST00000542552 DCUN1D3Q8IWE4 304 aa14.96□□□□□ -0.01
ECHDC2-223ENST00000542552 NLGN4XQ8N0W4 816 aa14.96□□□□□ -0.01
ECHDC2-223ENST00000542552 SPATA4Q8NEY3 305 aa14.96□□□□□ -0.01
ECHDC2-223ENST00000542552 NLGN4YQ8NFZ3 816 aaPredicted RBP14.96□□□□□ -0.01
ECHDC2-223ENST00000542552 CALML6Q8TD86 181 aa14.96□□□□□ -0.01
ECHDC2-223ENST00000542552 ZNF501Q96CX3 271 aaPredicted RBP14.96□□□□□ -0.01
ECHDC2-223ENST00000542552 SNF8Q96H20 258 aa14.96□□□□□ -0.01
ECHDC2-223ENST00000542552 BBC3Q96PG8 261 aaPredicted RBP14.96□□□□□ -0.01
ECHDC2-223ENST00000542552 TRAPPC9Q96Q05 1148 aa14.96□□□□□ -0.01
ECHDC2-223ENST00000542552 OR2A14Q96R47 310 aa14.96□□□□□ -0.01
ECHDC2-223ENST00000542552 UBL7Q96S82 380 aaPredicted RBP14.96□□□□□ -0.01
ECHDC2-223ENST00000542552 TUBB2BQ9BVA1 445 aa14.96□□□□□ -0.01
ECHDC2-223ENST00000542552 ULBP3Q9BZM4 244 aa14.96□□□□□ -0.01
ECHDC2-223ENST00000542552 PIEZO2Q9H5I5 2752 aa14.96□□□□□ -0.01
ECHDC2-223ENST00000542552 PDE7BQ9NP56 450 aa14.96□□□□□ -0.01
ECHDC2-223ENST00000542552 FGF21Q9NSA1 209 aa14.96□□□□□ -0.01
ECHDC2-223ENST00000542552 SPHK1Q9NYA1 384 aa14.96□□□□□ -0.01
ECHDC2-223ENST00000542552 KLHL42Q9P2K6 505 aa14.96□□□□□ -0.01
ECHDC2-223ENST00000542552 FBXO5Q9UKT4 447 aa14.96□□□□□ -0.01
ECHDC2-223ENST00000542552 MED16Q9Y2X0 877 aa14.96□□□□□ -0.01
ECHDC2-223ENST00000542552 KDM1AO60341 852 aa14.95□□□□□ -0.02
ECHDC2-223ENST00000542552 TIAF1O95411 115 aa14.95□□□□□ -0.02
ECHDC2-223ENST00000542552 MATN4O95460 622 aa14.95□□□□□ -0.02
ECHDC2-223ENST00000542552 F7P08709 466 aaPredicted RBP14.95□□□□□ -0.02
ECHDC2-223ENST00000542552 LIFP15018 202 aa14.95□□□□□ -0.02
ECHDC2-223ENST00000542552 ST6GAL1P15907 406 aa14.95□□□□□ -0.02
ECHDC2-223ENST00000542552 CHRM3P20309 590 aa14.95□□□□□ -0.02
ECHDC2-223ENST00000542552 PKLRP30613 574 aa14.95□□□□□ -0.02
ECHDC2-223ENST00000542552 ARL4DP49703 201 aa14.95□□□□□ -0.02
ECHDC2-223ENST00000542552 RAB28P51157 221 aa14.95□□□□□ -0.02
ECHDC2-223ENST00000542552 CLCN7P51798 805 aa14.95□□□□□ -0.02
ECHDC2-223ENST00000542552 ITGA8P53708 1063 aa14.95□□□□□ -0.02
ECHDC2-223ENST00000542552 ABHD18Q0P651 414 aa14.95□□□□□ -0.02
ECHDC2-223ENST00000542552 BBS9Q3SYG4 887 aa14.95□□□□□ -0.02
ECHDC2-223ENST00000542552 SOWAHCQ53LP3 525 aaPredicted RBP14.95□□□□□ -0.02
ECHDC2-223ENST00000542552 SPANXN3Q5MJ09 141 aa14.95□□□□□ -0.02
ECHDC2-223ENST00000542552 PWWP2BQ6NUJ5 590 aa14.95□□□□□ -0.02
ECHDC2-223ENST00000542552 PCSK4Q6UW60 755 aa14.95□□□□□ -0.02
ECHDC2-223ENST00000542552 PDIK1LQ8N165 341 aa14.95□□□□□ -0.02
ECHDC2-223ENST00000542552 IL22RA1Q8N6P7 574 aa14.95□□□□□ -0.02
ECHDC2-223ENST00000542552 LINC01555Q8NAE3 123 aa14.95□□□□□ -0.02
ECHDC2-223ENST00000542552 OR8K5Q8NH50 307 aa14.95□□□□□ -0.02
ECHDC2-223ENST00000542552 CFAP61Q8NHU2 1237 aa14.95□□□□□ -0.02
ECHDC2-223ENST00000542552 LRRC39Q96DD0 335 aa14.95□□□□□ -0.02
ECHDC2-223ENST00000542552 PWWP2AQ96N64 755 aa14.95□□□□□ -0.02
ECHDC2-223ENST00000542552 WDR83Q9BRX9 315 aaKnown RBP14.95□□□□□ -0.02
ECHDC2-223ENST00000542552 FAM167BQ9BTA0 163 aa14.95□□□□□ -0.02
ECHDC2-223ENST00000542552 CHRNA10Q9GZZ6 450 aa14.95□□□□□ -0.02
ECHDC2-223ENST00000542552 FBXO6Q9NRD1 293 aaPredicted RBP14.95□□□□□ -0.02
ECHDC2-223ENST00000542552 RARRES3Q9UL19 164 aa14.95□□□□□ -0.02
ECHDC2-223ENST00000542552 PLAGL1Q9UM63 463 aa14.95□□□□□ -0.02
ECHDC2-223ENST00000542552 PCDHGA4Q9Y5G9 962 aa14.95□□□□□ -0.02
ECHDC2-223ENST00000542552 NFS1Q9Y697 457 aa14.95□□□□□ -0.02
ECHDC2-223ENST00000542552 TEX264Q9Y6I9 313 aa14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms