RNA–Protein interactions for RNA: ENST00000542310.1

VPS33A-206, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS33A, Length 756 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-206ENST00000542310 PRKG2Q13237 762 aa15.12■□□□□ 0.01
VPS33A-206ENST00000542310 RPS6KA1Q15418 735 aa15.12■□□□□ 0.01
VPS33A-206ENST00000542310 UNC5AQ6ZN44 842 aa15.12■□□□□ 0.01
VPS33A-206ENST00000542310 CDHR3Q6ZTQ4 885 aa15.12■□□□□ 0.01
VPS33A-206ENST00000542310 ZNF534Q76KX8 674 aa15.12■□□□□ 0.01
VPS33A-206ENST00000542310 SLC22A15Q8IZD6 547 aa15.12■□□□□ 0.01
VPS33A-206ENST00000542310 ENDOVQ8N8Q3 282 aaKnown RBP15.12■□□□□ 0.01
VPS33A-206ENST00000542310 OR4L1Q8NH43 312 aa15.12■□□□□ 0.01
VPS33A-206ENST00000542310 C1orf54Q8WWF1 131 aa15.12■□□□□ 0.01
VPS33A-206ENST00000542310 TCTN2Q96GX1 697 aa15.12■□□□□ 0.01
VPS33A-206ENST00000542310 DHRS4Q9BTZ2 278 aa15.12■□□□□ 0.01
VPS33A-206ENST00000542310 XKR8Q9H6D3 395 aa15.12■□□□□ 0.01
VPS33A-206ENST00000542310 SLC2A6Q9UGQ3 507 aa15.12■□□□□ 0.01
VPS33A-206ENST00000542310 TLK1Q9UKI8 766 aa15.12■□□□□ 0.01
VPS33A-206ENST00000542310 SNX7Q9UNH6 387 aa15.12■□□□□ 0.01
VPS33A-206ENST00000542310 NUP210LQ5VU65 1888 aa15.12■□□□□ 0.01
VPS33A-206ENST00000542310 TNRC6AQ8NDV7 1962 aaKnown RBP15.11■□□□□ 0.01
VPS33A-206ENST00000542310 A0A0J9YY10 115 aa15.11■□□□□ 0.01
VPS33A-206ENST00000542310 BHMG1C9JSJ3 638 aaPredicted RBP15.11■□□□□ 0.01
VPS33A-206ENST00000542310 RPN2P04844 631 aa15.11■□□□□ 0.01
VPS33A-206ENST00000542310 APRTP07741 180 aa15.11■□□□□ 0.01
VPS33A-206ENST00000542310 CHRM5P08912 532 aaPredicted RBP15.11■□□□□ 0.01
VPS33A-206ENST00000542310 PVRP15151 417 aa15.11■□□□□ 0.01
VPS33A-206ENST00000542310 GRIA1P42261 906 aa15.11■□□□□ 0.01
VPS33A-206ENST00000542310 KIR2DS3Q14952 304 aa15.11■□□□□ 0.01
VPS33A-206ENST00000542310 NCF4Q15080 339 aa15.11■□□□□ 0.01
VPS33A-206ENST00000542310 SIX1Q15475 284 aaPredicted RBP15.11■□□□□ 0.01
VPS33A-206ENST00000542310 CCNG2Q16589 344 aa15.11■□□□□ 0.01
VPS33A-206ENST00000542310 SLC5A12Q1EHB4 618 aa15.11■□□□□ 0.01
VPS33A-206ENST00000542310 FASTKD1Q53R41 847 aaKnown RBP15.11■□□□□ 0.01
VPS33A-206ENST00000542310 ZNF385CQ66K41 422 aaPredicted RBP15.11■□□□□ 0.01
VPS33A-206ENST00000542310 ASB18Q6ZVZ8 466 aa15.11■□□□□ 0.01
VPS33A-206ENST00000542310 GPR135Q8IZ08 494 aa15.11■□□□□ 0.01
VPS33A-206ENST00000542310 MPP5Q8N3R9 675 aa15.11■□□□□ 0.01
VPS33A-206ENST00000542310 FLVCR1-AS1Q8TAF5 88 aa15.11■□□□□ 0.01
VPS33A-206ENST00000542310 MAIP1Q8WWC4 291 aa15.11■□□□□ 0.01
VPS33A-206ENST00000542310 OR2A14Q96R47 310 aa15.11■□□□□ 0.01
VPS33A-206ENST00000542310 CARD6Q9BX69 1037 aa15.11■□□□□ 0.01
VPS33A-206ENST00000542310 AP1M1Q9BXS5 423 aa15.11■□□□□ 0.01
VPS33A-206ENST00000542310 SLC7A5P2Q9GIP4 190 aa15.11■□□□□ 0.01
VPS33A-206ENST00000542310 TCFL5Q9UL49 500 aa15.11■□□□□ 0.01
VPS33A-206ENST00000542310 PADI2Q9Y2J8 665 aa15.11■□□□□ 0.01
VPS33A-206ENST00000542310 PCDHGB7Q9Y5F8 929 aa15.11■□□□□ 0.01
VPS33A-206ENST00000542310 AP1M2Q9Y6Q5 423 aa15.11■□□□□ 0.01
VPS33A-206ENST00000542310 PTPN13Q12923 2485 aa15.11■□□□□ 0.01
VPS33A-206ENST00000542310 C9J4A7 227 aa15.1■□□□□ 0.01
VPS33A-206ENST00000542310 H3BMH7 237 aa15.1■□□□□ 0.01
VPS33A-206ENST00000542310 OR1I1O60431 355 aa15.1■□□□□ 0.01
VPS33A-206ENST00000542310 CAPN1P07384 714 aa15.1■□□□□ 0.01
VPS33A-206ENST00000542310 NR1D1P20393 614 aa15.1■□□□□ 0.01
VPS33A-206ENST00000542310 AGXTP21549 392 aa15.1■□□□□ 0.01
VPS33A-206ENST00000542310 PKLRP30613 574 aa15.1■□□□□ 0.01
VPS33A-206ENST00000542310 TTPAP49638 278 aa15.1■□□□□ 0.01
VPS33A-206ENST00000542310 RAB28P51157 221 aa15.1■□□□□ 0.01
VPS33A-206ENST00000542310 BRD3Q15059 726 aa15.1■□□□□ 0.01
VPS33A-206ENST00000542310 PCID2Q5JVF3 399 aa15.1■□□□□ 0.01
VPS33A-206ENST00000542310 PRAMEF17Q5VTA0 474 aa15.1■□□□□ 0.01
VPS33A-206ENST00000542310 PAPD7Q5XG87 772 aaKnown RBP15.1■□□□□ 0.01
VPS33A-206ENST00000542310 UNC5DQ6UXZ4 953 aa15.1■□□□□ 0.01
VPS33A-206ENST00000542310 DCUN1D3Q8IWE4 304 aa15.1■□□□□ 0.01
VPS33A-206ENST00000542310 TEX19Q8NA77 164 aa15.1■□□□□ 0.01
VPS33A-206ENST00000542310 OR6P1Q8NGX9 317 aa15.1■□□□□ 0.01
VPS33A-206ENST00000542310 PROKR1Q8TCW9 393 aa15.1■□□□□ 0.01
VPS33A-206ENST00000542310 ASZ1Q8WWH4 475 aa15.1■□□□□ 0.01
VPS33A-206ENST00000542310 N4BP2L2Q92802 583 aaPredicted RBP15.1■□□□□ 0.01
VPS33A-206ENST00000542310 ZNF778Q96MU6 729 aa15.1■□□□□ 0.01
VPS33A-206ENST00000542310 NRTNQ99748 197 aa15.1■□□□□ 0.01
VPS33A-206ENST00000542310 TRIM55Q9BYV6 548 aa15.1■□□□□ 0.01
VPS33A-206ENST00000542310 IL22Q9GZX6 179 aa15.1■□□□□ 0.01
VPS33A-206ENST00000542310 MLXIPLQ9NP71 852 aa15.1■□□□□ 0.01
VPS33A-206ENST00000542310 ACSS2Q9NR19 701 aa15.1■□□□□ 0.01
VPS33A-206ENST00000542310 CATSPERZQ9NTU4 200 aa15.1■□□□□ 0.01
VPS33A-206ENST00000542310 ANAPC5Q9UJX4 755 aa15.1■□□□□ 0.01
VPS33A-206ENST00000542310 SRPK3Q9UPE1 567 aa15.1■□□□□ 0.01
VPS33A-206ENST00000542310 DRG1Q9Y295 367 aaKnown RBP15.1■□□□□ 0.01
VPS33A-206ENST00000542310 TDRKHQ9Y2W6 561 aaKnown RBP15.1■□□□□ 0.01
VPS33A-206ENST00000542310 NBASA2RRP1 2371 aa15.1■□□□□ 0.01
VPS33A-206ENST00000542310 RELNP78509 3460 aa15.09■□□□□ 0.01
VPS33A-206ENST00000542310 PRMT5O14744 637 aaPredicted RBP15.09■□□□□ 0.01
VPS33A-206ENST00000542310 ZNF749O43361 778 aa15.09■□□□□ 0.01
VPS33A-206ENST00000542310 GPC4O75487 556 aa15.09■□□□□ 0.01
VPS33A-206ENST00000542310 CEACAM4O75871 244 aa15.09■□□□□ 0.01
VPS33A-206ENST00000542310 DNAJB5O75953 348 aa15.09■□□□□ 0.01
VPS33A-206ENST00000542310 APOA4P06727 396 aa15.09■□□□□ 0.01
VPS33A-206ENST00000542310 CCDC175P0C221 793 aa15.09■□□□□ 0.01
VPS33A-206ENST00000542310 TPBGLP0DKB5 382 aa15.09■□□□□ 0.01
VPS33A-206ENST00000542310 ETS1P14921 441 aa15.09■□□□□ 0.01
VPS33A-206ENST00000542310 CCR7P32248 378 aa15.09■□□□□ 0.01
VPS33A-206ENST00000542310 PTGIRP43119 386 aa15.09■□□□□ 0.01
VPS33A-206ENST00000542310 GABRA4P48169 554 aa15.09■□□□□ 0.01
VPS33A-206ENST00000542310 CD97P48960 835 aa15.09■□□□□ 0.01
VPS33A-206ENST00000542310 PGDP52209 483 aa15.09■□□□□ 0.01
VPS33A-206ENST00000542310 SNX1Q13596 522 aa15.09■□□□□ 0.01
VPS33A-206ENST00000542310 SEMA3AQ14563 771 aa15.09■□□□□ 0.01
VPS33A-206ENST00000542310 TMED2Q15363 201 aa15.09■□□□□ 0.01
VPS33A-206ENST00000542310 ARMC3Q5W041 872 aa15.09■□□□□ 0.01
VPS33A-206ENST00000542310 CPZQ66K79 652 aa15.09■□□□□ 0.01
VPS33A-206ENST00000542310 LCN10Q6JVE6 187 aa15.09■□□□□ 0.01
VPS33A-206ENST00000542310 RHBDD2Q6NTF9 364 aa15.09■□□□□ 0.01
VPS33A-206ENST00000542310 LRRC6Q86X45 466 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms