RNA–Protein interactions for RNA: ENST00000541963.5

CPSF7-220, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4 BASIC

Gene CPSF7, Length 549 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-220ENST00000541963 DYNC1LI1Q9Y6G9 523 aaKnown RBP5.42□□□□□ -1.54
CPSF7-220ENST00000541963 ITIH6Q6UXX5 1313 aa5.42□□□□□ -1.54
CPSF7-220ENST00000541963 CENPVL1A0A0U1RR11 272 aa5.41□□□□□ -1.54
CPSF7-220ENST00000541963 PIPSLA2A3N6 862 aa5.41□□□□□ -1.54
CPSF7-220ENST00000541963 TMEM191CA6NGB0 347 aa5.41□□□□□ -1.54
CPSF7-220ENST00000541963 ZSCAN5CA6NGD5 496 aaPredicted RBP5.41□□□□□ -1.54
CPSF7-220ENST00000541963 LRRC72A6NJI9 287 aa5.41□□□□□ -1.54
CPSF7-220ENST00000541963 TTC34A8MYJ7 566 aa5.41□□□□□ -1.54
CPSF7-220ENST00000541963 SLC30A4O14863 429 aa5.41□□□□□ -1.54
CPSF7-220ENST00000541963 ALOX15BO15296 676 aa5.41□□□□□ -1.54
CPSF7-220ENST00000541963 PRPSAP2O60256 369 aa5.41□□□□□ -1.54
CPSF7-220ENST00000541963 CNTN5O94779 1100 aa5.41□□□□□ -1.54
CPSF7-220ENST00000541963 IL1BP01584 269 aa5.41□□□□□ -1.54
CPSF7-220ENST00000541963 SERPINF2P08697 491 aa5.41□□□□□ -1.54
CPSF7-220ENST00000541963 GOT1P17174 413 aa5.41□□□□□ -1.54
CPSF7-220ENST00000541963 SLC8A1P32418 973 aa5.41□□□□□ -1.54
CPSF7-220ENST00000541963 LIPAP38571 399 aa5.41□□□□□ -1.54
CPSF7-220ENST00000541963 PBX1P40424 430 aa5.41□□□□□ -1.54
CPSF7-220ENST00000541963 PTGER3P43115 390 aa5.41□□□□□ -1.54
CPSF7-220ENST00000541963 ATXN1P54253 815 aaKnown RBP5.41□□□□□ -1.54
CPSF7-220ENST00000541963 HDAC4P56524 1084 aa5.41□□□□□ -1.54
CPSF7-220ENST00000541963 ARL4CP56559 192 aa5.41□□□□□ -1.54
CPSF7-220ENST00000541963 YBEYP58557 167 aaPredicted RBP5.41□□□□□ -1.54
CPSF7-220ENST00000541963 TIRAPP58753 221 aa5.41□□□□□ -1.54
CPSF7-220ENST00000541963 RPL7AP62424 266 aaKnown RBP5.41□□□□□ -1.54
CPSF7-220ENST00000541963 GNA12Q03113 381 aa5.41□□□□□ -1.54
CPSF7-220ENST00000541963 SCAPQ12770 1279 aa5.41□□□□□ -1.54
CPSF7-220ENST00000541963 FOXE3Q13461 319 aa5.41□□□□□ -1.54
CPSF7-220ENST00000541963 MAMLD1Q13495 774 aa5.41□□□□□ -1.54
CPSF7-220ENST00000541963 BMPR2Q13873 1038 aa5.41□□□□□ -1.54
CPSF7-220ENST00000541963 PIGHQ14442 188 aaPredicted RBP5.41□□□□□ -1.54
CPSF7-220ENST00000541963 SF3A2Q15428 464 aaKnown RBP5.41□□□□□ -1.54
CPSF7-220ENST00000541963 DLG2Q15700 870 aa5.41□□□□□ -1.54
CPSF7-220ENST00000541963 CST6Q15828 149 aa5.41□□□□□ -1.54
CPSF7-220ENST00000541963 CCDC6Q16204 474 aa5.41□□□□□ -1.54
CPSF7-220ENST00000541963 TIGD6Q17RP2 521 aa5.41□□□□□ -1.54
CPSF7-220ENST00000541963 P3H1Q32P28 736 aa5.41□□□□□ -1.54
CPSF7-220ENST00000541963 LSM12Q3MHD2 195 aaKnown RBP5.41□□□□□ -1.54
CPSF7-220ENST00000541963 ALFQ53S48 1182 aa5.41□□□□□ -1.54
CPSF7-220ENST00000541963 ERMARDQ5T6L9 678 aa5.41□□□□□ -1.54
CPSF7-220ENST00000541963 C9orf64Q5T6V5 341 aa5.41□□□□□ -1.54
CPSF7-220ENST00000541963 STPG1Q5TH74 334 aa5.41□□□□□ -1.54
CPSF7-220ENST00000541963 OTUD1Q5VV17 481 aaPredicted RBP5.41□□□□□ -1.54
CPSF7-220ENST00000541963 SPECC1LQ69YQ0 1117 aa5.41□□□□□ -1.54
CPSF7-220ENST00000541963 SLC9A4Q6AI14 798 aa5.41□□□□□ -1.54
CPSF7-220ENST00000541963 ABLIM2Q6H8Q1 611 aa5.41□□□□□ -1.54
CPSF7-220ENST00000541963 PLEKHA7Q6IQ23 1121 aa5.41□□□□□ -1.54
CPSF7-220ENST00000541963 TRNP1Q6NT89 227 aa5.41□□□□□ -1.54
CPSF7-220ENST00000541963 IL27RAQ6UWB1 636 aa5.41□□□□□ -1.54
CPSF7-220ENST00000541963 TFAP2DQ7Z6R9 452 aa5.41□□□□□ -1.54
CPSF7-220ENST00000541963 CAND1Q86VP6 1230 aaKnown RBP5.41□□□□□ -1.54
CPSF7-220ENST00000541963 PSTKQ8IV42 348 aaKnown RBP5.41□□□□□ -1.54
CPSF7-220ENST00000541963 MMAAQ8IVH4 418 aaKnown RBP5.41□□□□□ -1.54
CPSF7-220ENST00000541963 ZNF683Q8IZ20 524 aa5.41□□□□□ -1.54
CPSF7-220ENST00000541963 HDDC3Q8N4P3 179 aa5.41□□□□□ -1.54
CPSF7-220ENST00000541963 ZNF366Q8N895 744 aa5.41□□□□□ -1.54
CPSF7-220ENST00000541963 DCAF4L2Q8NA75 395 aa5.41□□□□□ -1.54
CPSF7-220ENST00000541963 OR8K1Q8NGG5 319 aa5.41□□□□□ -1.54
CPSF7-220ENST00000541963 XAGE5Q8WWM1 108 aa5.41□□□□□ -1.54
CPSF7-220ENST00000541963 DNASE2BQ8WZ79 361 aa5.41□□□□□ -1.54
CPSF7-220ENST00000541963 ZNF653Q96CK0 615 aa5.41□□□□□ -1.54
CPSF7-220ENST00000541963 RMDN1Q96DB5 314 aa5.41□□□□□ -1.54
CPSF7-220ENST00000541963 ALG14Q96F25 216 aa5.41□□□□□ -1.54
CPSF7-220ENST00000541963 VPS50Q96JG6 964 aa5.41□□□□□ -1.54
CPSF7-220ENST00000541963 LDHAL6BQ9BYZ2 381 aaPredicted RBP5.41□□□□□ -1.54
CPSF7-220ENST00000541963 XPO4Q9C0E2 1151 aaKnown RBP5.41□□□□□ -1.54
CPSF7-220ENST00000541963 ISCUQ9H1K1 167 aa5.41□□□□□ -1.54
CPSF7-220ENST00000541963 PABPC3Q9H361 631 aaKnown RBP5.41□□□□□ -1.54
CPSF7-220ENST00000541963 EPS8L2Q9H6S3 715 aa5.41□□□□□ -1.54
CPSF7-220ENST00000541963 TMEM9BQ9NQ34 198 aa5.41□□□□□ -1.54
CPSF7-220ENST00000541963 TRIM36Q9NQ86 728 aa5.41□□□□□ -1.54
CPSF7-220ENST00000541963 DYRK4Q9NR20 520 aa5.41□□□□□ -1.54
CPSF7-220ENST00000541963 KLC4Q9NSK0 619 aa5.41□□□□□ -1.54
CPSF7-220ENST00000541963 FBXL12Q9NXK8 326 aa5.41□□□□□ -1.54
CPSF7-220ENST00000541963 KCTD5Q9NXV2 234 aa5.41□□□□□ -1.54
CPSF7-220ENST00000541963 DLL3Q9NYJ7 618 aa5.41□□□□□ -1.54
CPSF7-220ENST00000541963 EHD3Q9NZN3 535 aa5.41□□□□□ -1.54
CPSF7-220ENST00000541963 OGFRQ9NZT2 677 aa5.41□□□□□ -1.54
CPSF7-220ENST00000541963 MPP6Q9NZW5 540 aa5.41□□□□□ -1.54
CPSF7-220ENST00000541963 DKK2Q9UBU2 259 aa5.41□□□□□ -1.54
CPSF7-220ENST00000541963 LCMT1Q9UIC8 334 aa5.41□□□□□ -1.54
CPSF7-220ENST00000541963 FZD4Q9ULV1 537 aa5.41□□□□□ -1.54
CPSF7-220ENST00000541963 FZD10Q9ULW2 581 aa5.41□□□□□ -1.54
CPSF7-220ENST00000541963 SNX10Q9Y5X0 201 aa5.41□□□□□ -1.54
CPSF7-220ENST00000541963 EML5Q05BV3 1969 aa5.41□□□□□ -1.54
CPSF7-220ENST00000541963 CEP192Q8TEP8 1941 aa5.4□□□□□ -1.54
CPSF7-220ENST00000541963 TCRBV5S1A1TA0A578 114 aa5.4□□□□□ -1.54
CPSF7-220ENST00000541963 MCF2LO15068 1137 aa5.4□□□□□ -1.54
CPSF7-220ENST00000541963 MID1O15344 667 aa5.4□□□□□ -1.54
CPSF7-220ENST00000541963 BCAT2O15382 392 aaPredicted RBP5.4□□□□□ -1.54
CPSF7-220ENST00000541963 SLC7A4O43246 635 aa5.4□□□□□ -1.54
CPSF7-220ENST00000541963 KDELR3O43731 214 aa5.4□□□□□ -1.54
CPSF7-220ENST00000541963 RAMP2O60895 175 aa5.4□□□□□ -1.54
CPSF7-220ENST00000541963 RNASEH2AO75792 299 aaKnown RBP5.4□□□□□ -1.54
CPSF7-220ENST00000541963 TNFRSF6BO95407 300 aa5.4□□□□□ -1.54
CPSF7-220ENST00000541963 SEMA4FO95754 770 aa5.4□□□□□ -1.54
CPSF7-220ENST00000541963 PTMAP06454 111 aaKnown RBP5.4□□□□□ -1.54
CPSF7-220ENST00000541963 EPHB2P29323 1055 aa5.4□□□□□ -1.54
CPSF7-220ENST00000541963 CASP14P31944 242 aa5.4□□□□□ -1.54
CPSF7-220ENST00000541963 NUDT1P36639 197 aa5.4□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms