RNA–Protein interactions for RNA: ENST00000540987.1

POLE-215, Transcript of DNA polymerase epsilon, catalytic subunit, human

TSL 3

Gene POLE, Length 587 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
POLE-215	ENST00000540987	PKLR	P30613	574 aa		13.2	□□□□□ -0.3
POLE-215	ENST00000540987	SHMT2	P34897	504 aa		13.2	□□□□□ -0.3
POLE-215	ENST00000540987	DLST	P36957	453 aa		13.2	□□□□□ -0.3
POLE-215	ENST00000540987	PPARG	P37231	505 aa	Predicted RBP	13.2	□□□□□ -0.3
POLE-215	ENST00000540987	MAGEA3	P43357	314 aa		13.2	□□□□□ -0.3
POLE-215	ENST00000540987	FNTA	P49354	379 aa		13.2	□□□□□ -0.3
POLE-215	ENST00000540987	EIF3B	P55884	814 aa	Known RBP	13.2	□□□□□ -0.3
POLE-215	ENST00000540987	HSPA14	Q0VDF9	509 aa		13.2	□□□□□ -0.3
POLE-215	ENST00000540987	GRB7	Q14451	532 aa		13.2	□□□□□ -0.3
POLE-215	ENST00000540987	ZIC1	Q15915	447 aa		13.2	□□□□□ -0.3
POLE-215	ENST00000540987	DNAJC21	Q5F1R6	531 aa	Known RBP	13.2	□□□□□ -0.3
POLE-215	ENST00000540987	CYB5D1	Q6P9G0	228 aa		13.2	□□□□□ -0.3
POLE-215	ENST00000540987	NAT8L	Q8N9F0	302 aa		13.2	□□□□□ -0.3
POLE-215	ENST00000540987	MCU	Q8NE86	351 aa		13.2	□□□□□ -0.3
POLE-215	ENST00000540987	OR1L3	Q8NH93	324 aa		13.2	□□□□□ -0.3
POLE-215	ENST00000540987	ZNF669	Q96BR6	464 aa	Predicted RBP	13.2	□□□□□ -0.3
POLE-215	ENST00000540987	BIRC8	Q96P09	236 aa		13.2	□□□□□ -0.3
POLE-215	ENST00000540987	SERPINB12	Q96P63	405 aa		13.2	□□□□□ -0.3
POLE-215	ENST00000540987	FCRL4	Q96PJ5	515 aa		13.2	□□□□□ -0.3
POLE-215	ENST00000540987	OR2A14	Q96R47	310 aa		13.2	□□□□□ -0.3
POLE-215	ENST00000540987	TSSK1B	Q9BXA7	367 aa		13.2	□□□□□ -0.3
POLE-215	ENST00000540987	LATS2	Q9NRM7	1088 aa		13.2	□□□□□ -0.3
POLE-215	ENST00000540987	PYCARD	Q9ULZ3	195 aa		13.2	□□□□□ -0.3
POLE-215	ENST00000540987	GCN1	Q92616	2671 aa	Known RBP	13.2	□□□□□ -0.3
POLE-215	ENST00000540987	PIPSL	A2A3N6	862 aa		13.19	□□□□□ -0.3
POLE-215	ENST00000540987	KRT87P	A6NCN2	255 aa		13.19	□□□□□ -0.3
POLE-215	ENST00000540987	TMEM150C	B9EJG8	249 aa		13.19	□□□□□ -0.3
POLE-215	ENST00000540987		F8W8V4	182 aa		13.19	□□□□□ -0.3
POLE-215	ENST00000540987	CPNE3	O75131	537 aa	Known RBP	13.19	□□□□□ -0.3
POLE-215	ENST00000540987	NIPSNAP2	O75323	286 aa		13.19	□□□□□ -0.3
POLE-215	ENST00000540987	NDUFS3	O75489	264 aa		13.19	□□□□□ -0.3
POLE-215	ENST00000540987	SCRG1	O75711	98 aa		13.19	□□□□□ -0.3
POLE-215	ENST00000540987	SLCO2B1	O94956	709 aa		13.19	□□□□□ -0.3
POLE-215	ENST00000540987	APOA4	P06727	396 aa		13.19	□□□□□ -0.3
POLE-215	ENST00000540987	MLN	P12872	115 aa		13.19	□□□□□ -0.3
POLE-215	ENST00000540987	OGN	P20774	298 aa	Known RBP	13.19	□□□□□ -0.3
POLE-215	ENST00000540987	BDKRB1	P46663	353 aa		13.19	□□□□□ -0.3
POLE-215	ENST00000540987	GABRA4	P48169	554 aa		13.19	□□□□□ -0.3
POLE-215	ENST00000540987	GPS2	Q13227	327 aa		13.19	□□□□□ -0.3
POLE-215	ENST00000540987	DNASE1L3	Q13609	305 aa		13.19	□□□□□ -0.3
POLE-215	ENST00000540987	TMED2	Q15363	201 aa		13.19	□□□□□ -0.3
POLE-215	ENST00000540987	TMTC4	Q5T4D3	741 aa		13.19	□□□□□ -0.3
POLE-215	ENST00000540987	PTRHD1	Q6GMV3	140 aa	Known RBP	13.19	□□□□□ -0.3
POLE-215	ENST00000540987	CDHR3	Q6ZTQ4	885 aa		13.19	□□□□□ -0.3
POLE-215	ENST00000540987	CENPU	Q71F23	418 aa		13.19	□□□□□ -0.3
POLE-215	ENST00000540987	LRRC6	Q86X45	466 aa		13.19	□□□□□ -0.3
POLE-215	ENST00000540987	TMEM126B	Q8IUX1	230 aa		13.19	□□□□□ -0.3
POLE-215	ENST00000540987	SPNS2	Q8IVW8	549 aa		13.19	□□□□□ -0.3
POLE-215	ENST00000540987	DCUN1D3	Q8IWE4	304 aa		13.19	□□□□□ -0.3
POLE-215	ENST00000540987	C19orf47	Q8N9M1	422 aa	Known RBP	13.19	□□□□□ -0.3
POLE-215	ENST00000540987	LINC01555	Q8NAE3	123 aa		13.19	□□□□□ -0.3
POLE-215	ENST00000540987	SLC38A9	Q8NBW4	561 aa		13.19	□□□□□ -0.3
POLE-215	ENST00000540987	IL17F	Q96PD4	163 aa		13.19	□□□□□ -0.3
POLE-215	ENST00000540987	EFHD1	Q9BUP0	239 aa		13.19	□□□□□ -0.3
POLE-215	ENST00000540987	DDX47	Q9H0S4	455 aa	Known RBP	13.19	□□□□□ -0.3
POLE-215	ENST00000540987	XAB2	Q9HCS7	855 aa	Known RBP	13.19	□□□□□ -0.3
POLE-215	ENST00000540987	LHX9	Q9NQ69	397 aa		13.19	□□□□□ -0.3
POLE-215	ENST00000540987	KCND1	Q9NSA2	647 aa		13.19	□□□□□ -0.3
POLE-215	ENST00000540987	POLG2	Q9UHN1	485 aa		13.19	□□□□□ -0.3
POLE-215	ENST00000540987	RUVBL2	Q9Y230	463 aa	Known RBP	13.19	□□□□□ -0.3
POLE-215	ENST00000540987	NFS1	Q9Y697	457 aa		13.19	□□□□□ -0.3
POLE-215	ENST00000540987	SPTB	P11277	2137 aa		13.19	□□□□□ -0.3
POLE-215	ENST00000540987	FER1L5	A0AVI2	2057 aa		13.18	□□□□□ -0.3
POLE-215	ENST00000540987	GOLGA6L10	A0A0M3HER8	536 aa		13.18	□□□□□ -0.3
POLE-215	ENST00000540987	ZCWPW2	A0A1B0GU75	182 aa		13.18	□□□□□ -0.3
POLE-215	ENST00000540987	FAM237B	A0A1B0GVD1	139 aa		13.18	□□□□□ -0.3
POLE-215	ENST00000540987	FANCG	O15287	622 aa		13.18	□□□□□ -0.3
POLE-215	ENST00000540987	HCRTR1	O43613	425 aa		13.18	□□□□□ -0.3
POLE-215	ENST00000540987	FURIN	P09958	794 aa		13.18	□□□□□ -0.3
POLE-215	ENST00000540987	FMO4	P31512	558 aa		13.18	□□□□□ -0.3
POLE-215	ENST00000540987	SARNP	P82979	210 aa	Known RBP	13.18	□□□□□ -0.3
POLE-215	ENST00000540987	GBX1	Q14549	363 aa		13.18	□□□□□ -0.3
POLE-215	ENST00000540987	KYNU	Q16719	465 aa		13.18	□□□□□ -0.3
POLE-215	ENST00000540987	DEFB110	Q30KQ9	67 aa		13.18	□□□□□ -0.3
POLE-215	ENST00000540987	ANKRD20A4	Q4UJ75	823 aa		13.18	□□□□□ -0.3
POLE-215	ENST00000540987	RNASEH2B	Q5TBB1	312 aa	Known RBP	13.18	□□□□□ -0.3
POLE-215	ENST00000540987	ARMC3	Q5W041	872 aa		13.18	□□□□□ -0.3
POLE-215	ENST00000540987	LCN10	Q6JVE6	187 aa		13.18	□□□□□ -0.3
POLE-215	ENST00000540987	MRNIP	Q6NTE8	343 aa		13.18	□□□□□ -0.3
POLE-215	ENST00000540987	C16orf46	Q6P387	395 aa		13.18	□□□□□ -0.3
POLE-215	ENST00000540987	CASC4	Q6P4E1	433 aa		13.18	□□□□□ -0.3
POLE-215	ENST00000540987	FAM199X	Q6PEV8	388 aa	Predicted RBP	13.18	□□□□□ -0.3
POLE-215	ENST00000540987	BORA	Q6PGQ7	559 aa		13.18	□□□□□ -0.3
POLE-215	ENST00000540987	UNC5D	Q6UXZ4	953 aa		13.18	□□□□□ -0.3
POLE-215	ENST00000540987	BPHL	Q86WA6	291 aa	Predicted RBP	13.18	□□□□□ -0.3
POLE-215	ENST00000540987	FAM20C	Q8IXL6	584 aa		13.18	□□□□□ -0.3
POLE-215	ENST00000540987	OR8K5	Q8NH50	307 aa		13.18	□□□□□ -0.3
POLE-215	ENST00000540987	CFAP61	Q8NHU2	1237 aa		13.18	□□□□□ -0.3
POLE-215	ENST00000540987	GRK7	Q8WTQ7	553 aa		13.18	□□□□□ -0.3
POLE-215	ENST00000540987	ASZ1	Q8WWH4	475 aa		13.18	□□□□□ -0.3
POLE-215	ENST00000540987	FAM136A	Q96C01	138 aa		13.18	□□□□□ -0.3
POLE-215	ENST00000540987	PANX3	Q96QZ0	392 aa		13.18	□□□□□ -0.3
POLE-215	ENST00000540987	ARHGAP9	Q9BRR9	750 aa		13.18	□□□□□ -0.3
POLE-215	ENST00000540987	FAM60A	Q9NP50	221 aa		13.18	□□□□□ -0.3
POLE-215	ENST00000540987	OR6C2	Q9NZP2	312 aa		13.18	□□□□□ -0.3
POLE-215	ENST00000540987	GALP	Q9UBC7	116 aa		13.18	□□□□□ -0.3
POLE-215	ENST00000540987	TSR3	Q9UJK0	312 aa	Known RBP	13.18	□□□□□ -0.3
POLE-215	ENST00000540987	PCDHGA6	Q9Y5G7	932 aa		13.18	□□□□□ -0.3
POLE-215	ENST00000540987	HELZ2	Q9BYK8	2649 aa	Known RBP	13.17	□□□□□ -0.3
POLE-215	ENST00000540987		A0A0J9YY10	115 aa		13.17	□□□□□ -0.3

Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms