RNA–Protein interactions for RNA: ENST00000538456.3

SMARCA4-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 3

Gene SMARCA4, Length 738 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-206ENST00000538456 UBASH3AP57075 661 aa13.51□□□□□ -0.25
SMARCA4-206ENST00000538456 XIAPP98170 497 aa13.51□□□□□ -0.25
SMARCA4-206ENST00000538456 CDC16Q13042 620 aa13.51□□□□□ -0.25
SMARCA4-206ENST00000538456 AIMP2Q13155 320 aaKnown RBP13.51□□□□□ -0.25
SMARCA4-206ENST00000538456 OLIG2Q13516 323 aa13.51□□□□□ -0.25
SMARCA4-206ENST00000538456 TFDP2Q14188 446 aa13.51□□□□□ -0.25
SMARCA4-206ENST00000538456 LRRC38Q5VT99 294 aa13.51□□□□□ -0.25
SMARCA4-206ENST00000538456 SP5Q6BEB4 398 aaPredicted RBP13.51□□□□□ -0.25
SMARCA4-206ENST00000538456 MICALCLQ6ZW33 695 aa13.51□□□□□ -0.25
SMARCA4-206ENST00000538456 MCEMP1Q8IX19 187 aa13.51□□□□□ -0.25
SMARCA4-206ENST00000538456 OR13C4Q8NGS5 318 aa13.51□□□□□ -0.25
SMARCA4-206ENST00000538456 DNAJB14Q8TBM8 379 aa13.51□□□□□ -0.25
SMARCA4-206ENST00000538456 PPP4R1Q8TF05 950 aa13.51□□□□□ -0.25
SMARCA4-206ENST00000538456 P3H4Q92791 437 aa13.51□□□□□ -0.25
SMARCA4-206ENST00000538456 COPS8Q99627 209 aa13.51□□□□□ -0.25
SMARCA4-206ENST00000538456 MVB12BQ9H7P6 319 aa13.51□□□□□ -0.25
SMARCA4-206ENST00000538456 SLC6A20Q9NP91 592 aa13.51□□□□□ -0.25
SMARCA4-206ENST00000538456 DDX56Q9NY93 547 aaKnown RBP13.51□□□□□ -0.25
SMARCA4-206ENST00000538456 MYO7BQ6PIF6 2116 aa13.51□□□□□ -0.25
SMARCA4-206ENST00000538456 C17orf113A0A1B0GUU1 675 aa13.5□□□□□ -0.25
SMARCA4-206ENST00000538456 CD63P08962 238 aa13.5□□□□□ -0.25
SMARCA4-206ENST00000538456 ITGALP20701 1170 aa13.5□□□□□ -0.25
SMARCA4-206ENST00000538456 ARHGAP25P42331 645 aa13.5□□□□□ -0.25
SMARCA4-206ENST00000538456 GABRA4P48169 554 aa13.5□□□□□ -0.25
SMARCA4-206ENST00000538456 BOP1Q14137 746 aaKnown RBP13.5□□□□□ -0.25
SMARCA4-206ENST00000538456 ZNF169Q14929 603 aaPredicted RBP13.5□□□□□ -0.25
SMARCA4-206ENST00000538456 PRAMEF13Q5VWM6 474 aa13.5□□□□□ -0.25
SMARCA4-206ENST00000538456 MRPL14Q6P1L8 145 aaKnown RBP13.5□□□□□ -0.25
SMARCA4-206ENST00000538456 ZNF449Q6P9G9 518 aa13.5□□□□□ -0.25
SMARCA4-206ENST00000538456 LUZP1Q86V48 1076 aa13.5□□□□□ -0.25
SMARCA4-206ENST00000538456 FJX1Q86VR8 437 aa13.5□□□□□ -0.25
SMARCA4-206ENST00000538456 OR5AR1Q8NGP9 310 aa13.5□□□□□ -0.25
SMARCA4-206ENST00000538456 FAR1Q8WVX9 515 aa13.5□□□□□ -0.25
SMARCA4-206ENST00000538456 TFGQ92734 400 aaPredicted RBP13.5□□□□□ -0.25
SMARCA4-206ENST00000538456 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.5□□□□□ -0.25
SMARCA4-206ENST00000538456 ULK4Q96C45 1275 aa13.5□□□□□ -0.25
SMARCA4-206ENST00000538456 IQCDQ96DY2 449 aa13.5□□□□□ -0.25
SMARCA4-206ENST00000538456 QKIQ96PU8 341 aaKnown RBP eCLIP13.5□□□□□ -0.25
SMARCA4-206ENST00000538456 OR2A14Q96R47 310 aa13.5□□□□□ -0.25
SMARCA4-206ENST00000538456 VAT1Q99536 393 aa13.5□□□□□ -0.25
SMARCA4-206ENST00000538456 GORASP1Q9BQQ3 440 aa13.5□□□□□ -0.25
SMARCA4-206ENST00000538456 NDC1Q9BTX1 674 aa13.5□□□□□ -0.25
SMARCA4-206ENST00000538456 C10orf88Q9H8K7 445 aa13.5□□□□□ -0.25
SMARCA4-206ENST00000538456 VPS37BQ9H9H4 285 aa13.5□□□□□ -0.25
SMARCA4-206ENST00000538456 SPHK1Q9NYA1 384 aa13.5□□□□□ -0.25
SMARCA4-206ENST00000538456 CDC23Q9UJX2 597 aa13.5□□□□□ -0.25
SMARCA4-206ENST00000538456 PDZD2O15018 2839 aa13.49□□□□□ -0.25
SMARCA4-206ENST00000538456 C5orf60A6NFR6 353 aa13.49□□□□□ -0.25
SMARCA4-206ENST00000538456 AGAP14A8MT82 685 aa13.49□□□□□ -0.25
SMARCA4-206ENST00000538456 SPOPO43791 374 aa13.49□□□□□ -0.25
SMARCA4-206ENST00000538456 CHRM5P08912 532 aaPredicted RBP13.49□□□□□ -0.25
SMARCA4-206ENST00000538456 EDN3P14138 238 aa13.49□□□□□ -0.25
SMARCA4-206ENST00000538456 ALAS2P22557 587 aa13.49□□□□□ -0.25
SMARCA4-206ENST00000538456 GRNP28799 593 aaKnown RBP13.49□□□□□ -0.25
SMARCA4-206ENST00000538456 SHMT2P34897 504 aa13.49□□□□□ -0.25
SMARCA4-206ENST00000538456 TSFMP43897 325 aaKnown RBP13.49□□□□□ -0.25
SMARCA4-206ENST00000538456 CD151P48509 253 aa13.49□□□□□ -0.25
SMARCA4-206ENST00000538456 CDKN1CP49918 316 aaPredicted RBP13.49□□□□□ -0.25
SMARCA4-206ENST00000538456 GEMP55040 296 aa13.49□□□□□ -0.25
SMARCA4-206ENST00000538456 RIPPLY3P57055 190 aa13.49□□□□□ -0.25
SMARCA4-206ENST00000538456 ZNF658BQ4V348 819 aaPredicted RBP13.49□□□□□ -0.25
SMARCA4-206ENST00000538456 AGAP7PQ5VUJ5 663 aa13.49□□□□□ -0.25
SMARCA4-206ENST00000538456 IRAK1BP1Q5VVH5 260 aa13.49□□□□□ -0.25
SMARCA4-206ENST00000538456 UNC5AQ6ZN44 842 aa13.49□□□□□ -0.25
SMARCA4-206ENST00000538456 SHISA6Q6ZSJ9 500 aa13.49□□□□□ -0.25
SMARCA4-206ENST00000538456 CLDN19Q8N6F1 224 aa13.49□□□□□ -0.25
SMARCA4-206ENST00000538456 AGAP4Q96P64 663 aa13.49□□□□□ -0.25
SMARCA4-206ENST00000538456 GBA3Q9H227 469 aa13.49□□□□□ -0.25
SMARCA4-206ENST00000538456 SLC22A11Q9NSA0 550 aa13.49□□□□□ -0.25
SMARCA4-206ENST00000538456 TRHDEQ9UKU6 1024 aa13.49□□□□□ -0.25
SMARCA4-206ENST00000538456 TDRKHQ9Y2W6 561 aaKnown RBP13.49□□□□□ -0.25
SMARCA4-206ENST00000538456 A0A0J9YY10 115 aa13.48□□□□□ -0.25
SMARCA4-206ENST00000538456 CCDC78A2IDD5 438 aa13.48□□□□□ -0.25
SMARCA4-206ENST00000538456 AKR1B10O60218 316 aa13.48□□□□□ -0.25
SMARCA4-206ENST00000538456 ANXA9O76027 345 aa13.48□□□□□ -0.25
SMARCA4-206ENST00000538456 CRTAMO95727 393 aa13.48□□□□□ -0.25
SMARCA4-206ENST00000538456 PRSS56P0CW18 603 aa13.48□□□□□ -0.25
SMARCA4-206ENST00000538456 PTMSP20962 102 aa13.48□□□□□ -0.25
SMARCA4-206ENST00000538456 COMTP21964 271 aa13.48□□□□□ -0.25
SMARCA4-206ENST00000538456 MMP11P24347 488 aa13.48□□□□□ -0.25
SMARCA4-206ENST00000538456 ZNF140P52738 457 aaPredicted RBP13.48□□□□□ -0.25
SMARCA4-206ENST00000538456 TPM4P67936 248 aa13.48□□□□□ -0.25
SMARCA4-206ENST00000538456 BRD3Q15059 726 aa13.48□□□□□ -0.25
SMARCA4-206ENST00000538456 TAZQ16635 292 aa13.48□□□□□ -0.25
SMARCA4-206ENST00000538456 ASTE1Q2TB18 679 aaPredicted RBP13.48□□□□□ -0.25
SMARCA4-206ENST00000538456 TLDC1Q6P9B6 456 aa13.48□□□□□ -0.25
SMARCA4-206ENST00000538456 FAM180AQ6UWF9 173 aa13.48□□□□□ -0.25
SMARCA4-206ENST00000538456 TTLL10Q6ZVT0 673 aa13.48□□□□□ -0.25
SMARCA4-206ENST00000538456 SNX20Q7Z614 316 aa13.48□□□□□ -0.25
SMARCA4-206ENST00000538456 RHOT2Q8IXI1 618 aa13.48□□□□□ -0.25
SMARCA4-206ENST00000538456 FAM20CQ8IXL6 584 aa13.48□□□□□ -0.25
SMARCA4-206ENST00000538456 PARP9Q8IXQ6 854 aa13.48□□□□□ -0.25
SMARCA4-206ENST00000538456 HEXDCQ8WVB3 486 aa13.48□□□□□ -0.25
SMARCA4-206ENST00000538456 EPS8L2Q9H6S3 715 aa13.48□□□□□ -0.25
SMARCA4-206ENST00000538456 SPTLC3Q9NUV7 552 aa13.48□□□□□ -0.25
SMARCA4-206ENST00000538456 ZDHHC3Q9NYG2 299 aa13.48□□□□□ -0.25
SMARCA4-206ENST00000538456 COPG2Q9UBF2 871 aa13.48□□□□□ -0.25
SMARCA4-206ENST00000538456 PLAGL1Q9UM63 463 aa13.48□□□□□ -0.25
SMARCA4-206ENST00000538456 ASF1AQ9Y294 204 aa13.48□□□□□ -0.25
SMARCA4-206ENST00000538456 KLHL20Q9Y2M5 609 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms