RNA–Protein interactions for RNA: ENST00000538120.5

CLIP1-210, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 3

Gene CLIP1, Length 2,472 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-210ENST00000538120 ASB9Q96DX5 294 aa10.52□□□□□ -0.73
CLIP1-210ENST00000538120 MCOLN1Q9GZU1 580 aa10.52□□□□□ -0.73
CLIP1-210ENST00000538120 MTIF3Q9H2K0 278 aaKnown RBP10.52□□□□□ -0.73
CLIP1-210ENST00000538120 BCAP29Q9UHQ4 241 aa10.52□□□□□ -0.73
CLIP1-210ENST00000538120 TMX2-CTNND1H3BSU7 103 aa10.51□□□□□ -0.73
CLIP1-210ENST00000538120 RAD51BO15315 384 aa10.51□□□□□ -0.73
CLIP1-210ENST00000538120 FOXD2O60548 495 aaPredicted RBP10.51□□□□□ -0.73
CLIP1-210ENST00000538120 HGFP14210 728 aa10.51□□□□□ -0.73
CLIP1-210ENST00000538120 ZNF23P17027 643 aa10.51□□□□□ -0.73
CLIP1-210ENST00000538120 LBPP18428 481 aa10.51□□□□□ -0.73
CLIP1-210ENST00000538120 RECQLP46063 649 aaPredicted RBP10.51□□□□□ -0.73
CLIP1-210ENST00000538120 HSPA13P48723 471 aa10.51□□□□□ -0.73
CLIP1-210ENST00000538120 DGKGP49619 791 aa10.51□□□□□ -0.73
CLIP1-210ENST00000538120 ERVK-21P61565 698 aa10.51□□□□□ -0.73
CLIP1-210ENST00000538120 DCTN2Q13561 401 aaKnown RBP10.51□□□□□ -0.73
CLIP1-210ENST00000538120 MAPRE2Q15555 327 aa10.51□□□□□ -0.73
CLIP1-210ENST00000538120 FAM78AQ5JUQ0 283 aa10.51□□□□□ -0.73
CLIP1-210ENST00000538120 ZDHHC20Q5W0Z9 365 aa10.51□□□□□ -0.73
CLIP1-210ENST00000538120 C8orf82Q6P1X6 216 aaPredicted RBP10.51□□□□□ -0.73
CLIP1-210ENST00000538120 KLHL35Q6PF15 583 aa10.51□□□□□ -0.73
CLIP1-210ENST00000538120 CARM1Q86X55 608 aa10.51□□□□□ -0.73
CLIP1-210ENST00000538120 ETFBKMTQ8IXQ9 262 aa10.51□□□□□ -0.73
CLIP1-210ENST00000538120 ZNF366Q8N895 744 aa10.51□□□□□ -0.73
CLIP1-210ENST00000538120 SCAMP4Q969E2 229 aa10.51□□□□□ -0.73
CLIP1-210ENST00000538120 USB1Q9BQ65 265 aaKnown RBP10.51□□□□□ -0.73
CLIP1-210ENST00000538120 FAM126AQ9BYI3 521 aaPredicted RBP10.51□□□□□ -0.73
CLIP1-210ENST00000538120 CERS4Q9HA82 394 aa10.51□□□□□ -0.73
CLIP1-210ENST00000538120 TIMMDC1Q9NPL8 285 aa10.51□□□□□ -0.73
CLIP1-210ENST00000538120 SLC52A3Q9NQ40 469 aa10.51□□□□□ -0.73
CLIP1-210ENST00000538120 OTOL1A6NHN0 477 aaPredicted RBP10.51□□□□□ -0.73
CLIP1-210ENST00000538120 CFAP99D6REC4 459 aa10.51□□□□□ -0.73
CLIP1-210ENST00000538120 VPS4BO75351 444 aa10.51□□□□□ -0.73
CLIP1-210ENST00000538120 TULP3O75386 442 aa10.51□□□□□ -0.73
CLIP1-210ENST00000538120 CRCPO75575 148 aa10.51□□□□□ -0.73
CLIP1-210ENST00000538120 H6PDO95479 791 aa10.51□□□□□ -0.73
CLIP1-210ENST00000538120 GUCA1CO95843 209 aa10.51□□□□□ -0.73
CLIP1-210ENST00000538120 SLC6A11P48066 632 aa10.51□□□□□ -0.73
CLIP1-210ENST00000538120 HSPA7P48741 367 aa10.51□□□□□ -0.73
CLIP1-210ENST00000538120 NME5P56597 212 aa10.51□□□□□ -0.73
CLIP1-210ENST00000538120 TXNL4AP83876 142 aaKnown RBP10.51□□□□□ -0.73
CLIP1-210ENST00000538120 CTBSQ01459 385 aa10.51□□□□□ -0.73
CLIP1-210ENST00000538120 GBX1Q14549 363 aa10.51□□□□□ -0.73
CLIP1-210ENST00000538120 OGFOD2Q6N063 350 aa10.51□□□□□ -0.73
CLIP1-210ENST00000538120 LPCAT2Q7L5N7 544 aa10.51□□□□□ -0.73
CLIP1-210ENST00000538120 CDYL2Q8N8U2 506 aa10.51□□□□□ -0.73
CLIP1-210ENST00000538120 ST13P5Q8NFI4 369 aaPredicted RBP10.51□□□□□ -0.73
CLIP1-210ENST00000538120 NXPE3Q969Y0 559 aa10.51□□□□□ -0.73
CLIP1-210ENST00000538120 ULK4Q96C45 1275 aa10.51□□□□□ -0.73
CLIP1-210ENST00000538120 SLC45A3Q96JT2 553 aa10.51□□□□□ -0.73
CLIP1-210ENST00000538120 ZFYVE19Q96K21 471 aa10.51□□□□□ -0.73
CLIP1-210ENST00000538120 SLC25A23Q9BV35 468 aa10.51□□□□□ -0.73
CLIP1-210ENST00000538120 SDR39U1Q9NRG7 319 aaPredicted RBP10.51□□□□□ -0.73
CLIP1-210ENST00000538120 KCTD5Q9NXV2 234 aa10.51□□□□□ -0.73
CLIP1-210ENST00000538120 IL36AQ9UHA7 158 aa10.51□□□□□ -0.73
CLIP1-210ENST00000538120 DPP7Q9UHL4 492 aa10.51□□□□□ -0.73
CLIP1-210ENST00000538120 PLXNB3Q9ULL4 1909 aa10.51□□□□□ -0.73
CLIP1-210ENST00000538120 SLC27A6Q9Y2P4 619 aa10.51□□□□□ -0.73
CLIP1-210ENST00000538120 YBX2Q9Y2T7 364 aaKnown RBP10.51□□□□□ -0.73
CLIP1-210ENST00000538120 TDRKHQ9Y2W6 561 aaKnown RBP10.51□□□□□ -0.73
CLIP1-210ENST00000538120 TNPO3Q9Y5L0 923 aaKnown RBP10.51□□□□□ -0.73
CLIP1-210ENST00000538120 GPR45Q9Y5Y3 372 aa10.51□□□□□ -0.73
CLIP1-210ENST00000538120 UPK3BL1B0FP48 263 aa10.5□□□□□ -0.73
CLIP1-210ENST00000538120 PRRT4C9JH25 899 aa10.5□□□□□ -0.73
CLIP1-210ENST00000538120 UPK3BL2E5RIL1 263 aa10.5□□□□□ -0.73
CLIP1-210ENST00000538120 H3BNH8 94 aa10.5□□□□□ -0.73
CLIP1-210ENST00000538120 SGTAO43765 313 aa10.5□□□□□ -0.73
CLIP1-210ENST00000538120 NRP2O60462 931 aa10.5□□□□□ -0.73
CLIP1-210ENST00000538120 TIPRLO75663 272 aa10.5□□□□□ -0.73
CLIP1-210ENST00000538120 C8BP07358 591 aa10.5□□□□□ -0.73
CLIP1-210ENST00000538120 SRPRAP08240 638 aaKnown RBP10.5□□□□□ -0.73
CLIP1-210ENST00000538120 GNAO1P09471 354 aa10.5□□□□□ -0.73
CLIP1-210ENST00000538120 ZNF30P17039 623 aa10.5□□□□□ -0.73
CLIP1-210ENST00000538120 AOAHP28039 575 aa10.5□□□□□ -0.73
CLIP1-210ENST00000538120 ALDH3B2P48448 385 aa10.5□□□□□ -0.73
CLIP1-210ENST00000538120 PSMD8P48556 350 aa10.5□□□□□ -0.73
CLIP1-210ENST00000538120 HTR6P50406 440 aa10.5□□□□□ -0.73
CLIP1-210ENST00000538120 DIO3P55073 304 aa10.5□□□□□ -0.73
CLIP1-210ENST00000538120 RHDQ02161 417 aa10.5□□□□□ -0.73
CLIP1-210ENST00000538120 GTF2H2Q13888 395 aa10.5□□□□□ -0.73
CLIP1-210ENST00000538120 KCNC3Q14003 757 aa10.5□□□□□ -0.73
CLIP1-210ENST00000538120 ARHGEF7Q14155 803 aa10.5□□□□□ -0.73
CLIP1-210ENST00000538120 CRY1Q16526 586 aa10.5□□□□□ -0.73
CLIP1-210ENST00000538120 GTF2H2CQ6P1K8 395 aa10.5□□□□□ -0.73
CLIP1-210ENST00000538120 Q6ZSR9 355 aa10.5□□□□□ -0.73
CLIP1-210ENST00000538120 Q6ZVL8 140 aa10.5□□□□□ -0.73
CLIP1-210ENST00000538120 NPAS3Q8IXF0 933 aa10.5□□□□□ -0.73
CLIP1-210ENST00000538120 RBM12BQ8IXT5 1001 aaKnown RBP10.5□□□□□ -0.73
CLIP1-210ENST00000538120 RHBDF1Q96CC6 855 aa10.5□□□□□ -0.73
CLIP1-210ENST00000538120 FAM83DQ9H4H8 585 aa10.5□□□□□ -0.73
CLIP1-210ENST00000538120 PLA2G2EQ9NZK7 142 aa10.5□□□□□ -0.73
CLIP1-210ENST00000538120 PKD2L2Q9NZM6 624 aa10.5□□□□□ -0.73
CLIP1-210ENST00000538120 MAP10Q9P2G4 905 aa10.5□□□□□ -0.73
CLIP1-210ENST00000538120 EBF1Q9UH73 591 aa10.5□□□□□ -0.73
CLIP1-210ENST00000538120 CNOT11Q9UKZ1 510 aaKnown RBP10.5□□□□□ -0.73
CLIP1-210ENST00000538120 PADI4Q9UM07 663 aa10.5□□□□□ -0.73
CLIP1-210ENST00000538120 PDE4DIPQ5VU43 2346 aa10.5□□□□□ -0.73
CLIP1-210ENST00000538120 TMEM238LA0A1B0GVL6 79 aa10.5□□□□□ -0.73
CLIP1-210ENST00000538120 ZNF839A8K0R7 811 aa10.5□□□□□ -0.73
CLIP1-210ENST00000538120 SOCS2O14508 198 aa10.5□□□□□ -0.73
CLIP1-210ENST00000538120 MTX2O75431 263 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms