RNA–Protein interactions for RNA: ENST00000538077.2

LINC00346-201, long intergenic non-protein coding RNA 346, humanhuman

BASIC

Gene LINC00346, Length 6,265 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346-201ENST00000538077 SCNN1AP37088 669 aa11□□□□□ -0.65
LINC00346-201ENST00000538077 GRK6P43250 576 aa11□□□□□ -0.65
LINC00346-201ENST00000538077 SLC6A9P48067 706 aa11□□□□□ -0.65
LINC00346-201ENST00000538077 CCR8P51685 355 aa11□□□□□ -0.65
LINC00346-201ENST00000538077 NRG3P56975 720 aa11□□□□□ -0.65
LINC00346-201ENST00000538077 ZNF280AP59817 542 aaPredicted RBP11□□□□□ -0.65
LINC00346-201ENST00000538077 FUT2Q10981 343 aa11□□□□□ -0.65
LINC00346-201ENST00000538077 CHRNA6Q15825 494 aa11□□□□□ -0.65
LINC00346-201ENST00000538077 MAPK14Q16539 360 aa11□□□□□ -0.65
LINC00346-201ENST00000538077 ARL13AQ5H913 290 aaPredicted RBP11□□□□□ -0.65
LINC00346-201ENST00000538077 TTC27Q6P3X3 843 aa11□□□□□ -0.65
LINC00346-201ENST00000538077 NUP54Q7Z3B4 507 aa11□□□□□ -0.65
LINC00346-201ENST00000538077 POF1BQ8WVV4 589 aa11□□□□□ -0.65
LINC00346-201ENST00000538077 MED1Q15648 1581 aaPredicted RBP11□□□□□ -0.65
LINC00346-201ENST00000538077 CCDC162PA2VCL2 907 aa11□□□□□ -0.65
LINC00346-201ENST00000538077 BBIP1A8MTZ0 92 aa11□□□□□ -0.65
LINC00346-201ENST00000538077 TNFRSF10BO14763 440 aa11□□□□□ -0.65
LINC00346-201ENST00000538077 KLK1P06870 262 aa11□□□□□ -0.65
LINC00346-201ENST00000538077 PRKAR1AP10644 381 aa11□□□□□ -0.65
LINC00346-201ENST00000538077 ARHGAP40Q5TG30 622 aa11□□□□□ -0.65
LINC00346-201ENST00000538077 HFE2Q6ZVN8 426 aa11□□□□□ -0.65
LINC00346-201ENST00000538077 CMTM8Q8IZV2 173 aa11□□□□□ -0.65
LINC00346-201ENST00000538077 BRSK1Q8TDC3 778 aa11□□□□□ -0.65
LINC00346-201ENST00000538077 PIWIL1Q96J94 861 aaKnown RBP11□□□□□ -0.65
LINC00346-201ENST00000538077 TXNRD2Q9NNW7 524 aa11□□□□□ -0.65
LINC00346-201ENST00000538077 IFT46Q9NQC8 304 aa11□□□□□ -0.65
LINC00346-201ENST00000538077 LRRC10BA6NIK2 292 aa11□□□□□ -0.65
LINC00346-201ENST00000538077 TMEM150CB9EJG8 249 aa11□□□□□ -0.65
LINC00346-201ENST00000538077 NFKBIEO00221 500 aa11□□□□□ -0.65
LINC00346-201ENST00000538077 TAF4O00268 1085 aa11□□□□□ -0.65
LINC00346-201ENST00000538077 HAT1O14929 419 aa11□□□□□ -0.65
LINC00346-201ENST00000538077 CCNB2O95067 398 aa11□□□□□ -0.65
LINC00346-201ENST00000538077 GBAP04062 536 aa11□□□□□ -0.65
LINC00346-201ENST00000538077 TYRP14679 529 aa11□□□□□ -0.65
LINC00346-201ENST00000538077 ACVR2AP27037 513 aa11□□□□□ -0.65
LINC00346-201ENST00000538077 CAPGP40121 348 aa11□□□□□ -0.65
LINC00346-201ENST00000538077 SLC11A1P49279 550 aa11□□□□□ -0.65
LINC00346-201ENST00000538077 CDK9P50750 372 aaKnown RBP11□□□□□ -0.65
LINC00346-201ENST00000538077 HTRA3P83110 453 aa11□□□□□ -0.65
LINC00346-201ENST00000538077 KLF10Q13118 480 aa11□□□□□ -0.65
LINC00346-201ENST00000538077 SLBPQ14493 270 aaKnown RBP eCLIP11□□□□□ -0.65
LINC00346-201ENST00000538077 NDUFA5Q16718 116 aa11□□□□□ -0.65
LINC00346-201ENST00000538077 CLEC12AQ5QGZ9 265 aa11□□□□□ -0.65
LINC00346-201ENST00000538077 KBTBD8Q8NFY9 601 aa11□□□□□ -0.65
LINC00346-201ENST00000538077 ZNF516Q92618 1163 aa11□□□□□ -0.65
LINC00346-201ENST00000538077 COPS4Q9BT78 406 aa11□□□□□ -0.65
LINC00346-201ENST00000538077 FADS2P1A8MWK0 482 aa11□□□□□ -0.65
LINC00346-201ENST00000538077 NME6O75414 186 aaPredicted RBP11□□□□□ -0.65
LINC00346-201ENST00000538077 IFNW1P05000 195 aa11□□□□□ -0.65
LINC00346-201ENST00000538077 NSG1P42857 185 aa11□□□□□ -0.65
LINC00346-201ENST00000538077 CBX5P45973 191 aa11□□□□□ -0.65
LINC00346-201ENST00000538077 YBEYP58557 167 aaPredicted RBP11□□□□□ -0.65
LINC00346-201ENST00000538077 EOGTQ5NDL2 527 aa11□□□□□ -0.65
LINC00346-201ENST00000538077 ULK3Q6PHR2 472 aa11□□□□□ -0.65
LINC00346-201ENST00000538077 PIM3Q86V86 326 aa11□□□□□ -0.65
LINC00346-201ENST00000538077 AP3S1Q92572 193 aa11□□□□□ -0.65
LINC00346-201ENST00000538077 HIST1H2AAQ96QV6 131 aa11□□□□□ -0.65
LINC00346-201ENST00000538077 KLF8O95600 359 aaPredicted RBP11□□□□□ -0.65
LINC00346-201ENST00000538077 LBX1P52954 281 aa11□□□□□ -0.65
LINC00346-201ENST00000538077 ABATP80404 500 aa11□□□□□ -0.65
LINC00346-201ENST00000538077 TMEM164Q5U3C3 297 aa11□□□□□ -0.65
LINC00346-201ENST00000538077 HGSNATQ68CP4 663 aa11□□□□□ -0.65
LINC00346-201ENST00000538077 SRFBP1Q8NEF9 429 aaKnown RBP11□□□□□ -0.65
LINC00346-201ENST00000538077 OR2L3Q8NG85 312 aa11□□□□□ -0.65
LINC00346-201ENST00000538077 OR6K6Q8NGW6 343 aa11□□□□□ -0.65
LINC00346-201ENST00000538077 LRTOMTQ8WZ04 291 aa11□□□□□ -0.65
LINC00346-201ENST00000538077 ZNF446Q9NWS9 450 aa11□□□□□ -0.65
LINC00346-201ENST00000538077 RCOR3Q9P2K3 495 aaPredicted RBP11□□□□□ -0.65
LINC00346-201ENST00000538077 SRRDQ9UH36 339 aa11□□□□□ -0.65
LINC00346-201ENST00000538077 AJAP1Q9UKB5 411 aaPredicted RBP11□□□□□ -0.65
LINC00346-201ENST00000538077 SLIT3O75094 1523 aa10.99□□□□□ -0.65
LINC00346-201ENST00000538077 C9J4A7 227 aa10.99□□□□□ -0.65
LINC00346-201ENST00000538077 TBX1O43435 398 aa10.99□□□□□ -0.65
LINC00346-201ENST00000538077 IL33O95760 270 aa10.99□□□□□ -0.65
LINC00346-201ENST00000538077 ARHGDIBP52566 201 aa10.99□□□□□ -0.65
LINC00346-201ENST00000538077 TMEM126BQ8IUX1 230 aa10.99□□□□□ -0.65
LINC00346-201ENST00000538077 MIPEPQ99797 713 aa10.99□□□□□ -0.65
LINC00346-201ENST00000538077 HOPXQ9BPY8 73 aaPredicted RBP10.99□□□□□ -0.65
LINC00346-201ENST00000538077 NDC1Q9BTX1 674 aa10.99□□□□□ -0.65
LINC00346-201ENST00000538077 BTBD1Q9H0C5 482 aa10.99□□□□□ -0.65
LINC00346-201ENST00000538077 MINDY3Q9H8M7 445 aa10.99□□□□□ -0.65
LINC00346-201ENST00000538077 TRIM39Q9HCM9 518 aa10.99□□□□□ -0.65
LINC00346-201ENST00000538077 SPATA6Q9NWH7 488 aaPredicted RBP10.99□□□□□ -0.65
LINC00346-201ENST00000538077 FAM237AA0A1B0GTK4 181 aa10.99□□□□□ -0.65
LINC00346-201ENST00000538077 SH3D21A4FU49 640 aa10.99□□□□□ -0.65
LINC00346-201ENST00000538077 LOC110117498-PIK3R3F6TDL0 507 aa10.99□□□□□ -0.65
LINC00346-201ENST00000538077 AREL1O15033 823 aa10.99□□□□□ -0.65
LINC00346-201ENST00000538077 PCDH7O60245 1069 aa10.99□□□□□ -0.65
LINC00346-201ENST00000538077 ZNF432O94892 652 aa10.99□□□□□ -0.65
LINC00346-201ENST00000538077 SLC7A1P30825 629 aa10.99□□□□□ -0.65
LINC00346-201ENST00000538077 PPP3R1P63098 170 aa10.99□□□□□ -0.65
LINC00346-201ENST00000538077 ID2Q02363 134 aa10.99□□□□□ -0.65
LINC00346-201ENST00000538077 SMYD5Q6GMV2 418 aa10.99□□□□□ -0.65
LINC00346-201ENST00000538077 C1orf94Q6P1W5 598 aa10.99□□□□□ -0.65
LINC00346-201ENST00000538077 AHSA2Q719I0 299 aa10.99□□□□□ -0.65
LINC00346-201ENST00000538077 SPATC1Q76KD6 591 aa10.99□□□□□ -0.65
LINC00346-201ENST00000538077 SLCO6A1Q86UG4 719 aa10.99□□□□□ -0.65
LINC00346-201ENST00000538077 RNPEPL1Q9HAU8 725 aa10.99□□□□□ -0.65
LINC00346-201ENST00000538077 CDH22Q9UJ99 828 aa10.99□□□□□ -0.65
LINC00346-201ENST00000538077 TULP3O75386 442 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms