RNA–Protein interactions for RNA: ENST00000537408.1

CLSTN3-207, Transcript of calsyntenin 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLSTN3, Length 4,296 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-207ENST00000537408 NEDD4LQ96PU5 975 aa10.69□□□□□ -0.7
CLSTN3-207ENST00000537408 ALG2Q9H553 416 aa10.69□□□□□ -0.7
CLSTN3-207ENST00000537408 ERVK13-1Q9NX77 482 aa10.69□□□□□ -0.7
CLSTN3-207ENST00000537408 XPNPEP2O43895 674 aa10.68□□□□□ -0.7
CLSTN3-207ENST00000537408 FGF18O76093 207 aa10.68□□□□□ -0.7
CLSTN3-207ENST00000537408 SLC25A11Q02978 314 aaKnown RBP10.68□□□□□ -0.7
CLSTN3-207ENST00000537408 UBE3AQ05086 875 aa10.68□□□□□ -0.7
CLSTN3-207ENST00000537408 LAMTOR4Q0VGL1 99 aa10.68□□□□□ -0.7
CLSTN3-207ENST00000537408 NFYCQ13952 458 aa10.68□□□□□ -0.7
CLSTN3-207ENST00000537408 TMEM132DQ14C87 1099 aa10.68□□□□□ -0.7
CLSTN3-207ENST00000537408 PLET1Q6UQ28 207 aa10.68□□□□□ -0.7
CLSTN3-207ENST00000537408 PELI3Q8N2H9 469 aa10.68□□□□□ -0.7
CLSTN3-207ENST00000537408 TMEM174Q8WUU8 243 aa10.68□□□□□ -0.7
CLSTN3-207ENST00000537408 RIT1Q92963 219 aa10.68□□□□□ -0.7
CLSTN3-207ENST00000537408 RNF121Q9H920 327 aa10.68□□□□□ -0.7
CLSTN3-207ENST00000537408 ACSS2Q9NR19 701 aa10.68□□□□□ -0.7
CLSTN3-207ENST00000537408 TRHDEQ9UKU6 1024 aa10.68□□□□□ -0.7
CLSTN3-207ENST00000537408 U3KQV3 271 aa10.68□□□□□ -0.7
CLSTN3-207ENST00000537408 OGTO15294 1046 aa10.68□□□□□ -0.7
CLSTN3-207ENST00000537408 PTP4A3O75365 173 aa10.68□□□□□ -0.7
CLSTN3-207ENST00000537408 MT-ND2P03891 347 aa10.68□□□□□ -0.7
CLSTN3-207ENST00000537408 CLEC2LP0C7M8 214 aa10.68□□□□□ -0.7
CLSTN3-207ENST00000537408 PTX3P26022 381 aaPredicted RBP10.68□□□□□ -0.7
CLSTN3-207ENST00000537408 RPL35P42766 123 aaKnown RBP10.68□□□□□ -0.7
CLSTN3-207ENST00000537408 MTHFRP42898 656 aa10.68□□□□□ -0.7
CLSTN3-207ENST00000537408 CCR10P46092 362 aa10.68□□□□□ -0.7
CLSTN3-207ENST00000537408 CYP24A1Q07973 514 aa10.68□□□□□ -0.7
CLSTN3-207ENST00000537408 KCNAB2Q13303 367 aa10.68□□□□□ -0.7
CLSTN3-207ENST00000537408 TBPL2Q6SJ96 375 aa10.68□□□□□ -0.7
CLSTN3-207ENST00000537408 SLC24A5Q71RS6 500 aa10.68□□□□□ -0.7
CLSTN3-207ENST00000537408 PDZD4Q76G19 769 aaPredicted RBP10.68□□□□□ -0.7
CLSTN3-207ENST00000537408 KCT2Q8NC54 265 aa10.68□□□□□ -0.7
CLSTN3-207ENST00000537408 ZNF566Q969W8 418 aa10.68□□□□□ -0.7
CLSTN3-207ENST00000537408 CERS2Q96G23 380 aa10.68□□□□□ -0.7
CLSTN3-207ENST00000537408 UBXN10Q96LJ8 280 aa10.68□□□□□ -0.7
CLSTN3-207ENST00000537408 RPRD1AQ96P16 312 aaPredicted RBP10.68□□□□□ -0.7
CLSTN3-207ENST00000537408 TRIM54Q9BYV2 358 aa10.68□□□□□ -0.7
CLSTN3-207ENST00000537408 MMP28Q9H239 520 aa10.68□□□□□ -0.7
CLSTN3-207ENST00000537408 CYP4F12Q9HCS2 524 aa10.68□□□□□ -0.7
CLSTN3-207ENST00000537408 ADGRE2Q9UHX3 823 aa10.68□□□□□ -0.7
CLSTN3-207ENST00000537408 RUVBL2Q9Y230 463 aaKnown RBP10.68□□□□□ -0.7
CLSTN3-207ENST00000537408 ACTL7AQ9Y615 435 aa10.68□□□□□ -0.7
CLSTN3-207ENST00000537408 BCLAF3A2AJT9 711 aaKnown RBP10.68□□□□□ -0.7
CLSTN3-207ENST00000537408 DFFAO00273 331 aa10.68□□□□□ -0.7
CLSTN3-207ENST00000537408 LRCH4O75427 683 aa10.68□□□□□ -0.7
CLSTN3-207ENST00000537408 RFPL3O75679 317 aa10.68□□□□□ -0.7
CLSTN3-207ENST00000537408 CPB1P15086 417 aa10.68□□□□□ -0.7
CLSTN3-207ENST00000537408 RYKP34925 604 aa10.68□□□□□ -0.7
CLSTN3-207ENST00000537408 HNF1BP35680 557 aa10.68□□□□□ -0.7
CLSTN3-207ENST00000537408 ANKS3Q6ZW76 656 aa10.68□□□□□ -0.7
CLSTN3-207ENST00000537408 TIGD4Q8IY51 512 aa10.68□□□□□ -0.7
CLSTN3-207ENST00000537408 SPPL2BQ8TCT7 592 aa10.68□□□□□ -0.7
CLSTN3-207ENST00000537408 IPCEF1Q8WWN9 437 aaPredicted RBP10.68□□□□□ -0.7
CLSTN3-207ENST00000537408 ISL2Q96A47 359 aa10.68□□□□□ -0.7
CLSTN3-207ENST00000537408 C1orf74Q96LT6 269 aa10.68□□□□□ -0.7
CLSTN3-207ENST00000537408 SPNS1Q9H2V7 528 aa10.68□□□□□ -0.7
CLSTN3-207ENST00000537408 SP110Q9HB58 689 aa10.68□□□□□ -0.7
CLSTN3-207ENST00000537408 PLAC1Q9HBJ0 212 aa10.68□□□□□ -0.7
CLSTN3-207ENST00000537408 INTS7Q9NVH2 962 aaKnown RBP10.68□□□□□ -0.7
CLSTN3-207ENST00000537408 ABCD2Q9UBJ2 740 aa10.68□□□□□ -0.7
CLSTN3-207ENST00000537408 A0A0J9YYE9 177 aa10.67□□□□□ -0.7
CLSTN3-207ENST00000537408 EEF2KO00418 725 aaKnown RBP10.67□□□□□ -0.7
CLSTN3-207ENST00000537408 ERVK-10P10266 1014 aa10.67□□□□□ -0.7
CLSTN3-207ENST00000537408 SOX11P35716 441 aa10.67□□□□□ -0.7
CLSTN3-207ENST00000537408 LIPEQ05469 1076 aa10.67□□□□□ -0.7
CLSTN3-207ENST00000537408 TAZQ16635 292 aa10.67□□□□□ -0.7
CLSTN3-207ENST00000537408 CTU2Q2VPK5 515 aaKnown RBP10.67□□□□□ -0.7
CLSTN3-207ENST00000537408 RETSATQ6NUM9 610 aa10.67□□□□□ -0.7
CLSTN3-207ENST00000537408 KLHL17Q6TDP4 642 aa10.67□□□□□ -0.7
CLSTN3-207ENST00000537408 KRT73Q86Y46 540 aa10.67□□□□□ -0.7
CLSTN3-207ENST00000537408 CCNYQ8ND76 341 aa10.67□□□□□ -0.7
CLSTN3-207ENST00000537408 ITFG1Q8TB96 612 aa10.67□□□□□ -0.7
CLSTN3-207ENST00000537408 TBCBQ99426 244 aa10.67□□□□□ -0.7
CLSTN3-207ENST00000537408 UGT2B28Q9BY64 529 aa10.67□□□□□ -0.7
CLSTN3-207ENST00000537408 TMEM245Q9H330 911 aa10.67□□□□□ -0.7
CLSTN3-207ENST00000537408 RDH8Q9NYR8 311 aa10.67□□□□□ -0.7
CLSTN3-207ENST00000537408 MAGEL2Q9UJ55 1249 aa10.67□□□□□ -0.7
CLSTN3-207ENST00000537408 TRAPPC4Q9Y296 219 aa10.67□□□□□ -0.7
CLSTN3-207ENST00000537408 ERN1O75460 977 aaKnown RBP10.67□□□□□ -0.7
CLSTN3-207ENST00000537408 SUPT7LO94864 414 aa10.67□□□□□ -0.7
CLSTN3-207ENST00000537408 VNN1O95497 513 aa10.67□□□□□ -0.7
CLSTN3-207ENST00000537408 HOXD4P09016 255 aaPredicted RBP10.67□□□□□ -0.7
CLSTN3-207ENST00000537408 RAP2AP10114 183 aa10.67□□□□□ -0.7
CLSTN3-207ENST00000537408 NCK1P16333 377 aa10.67□□□□□ -0.7
CLSTN3-207ENST00000537408 POU3F3P20264 500 aaPredicted RBP10.67□□□□□ -0.7
CLSTN3-207ENST00000537408 EDNRBP24530 442 aa10.67□□□□□ -0.7
CLSTN3-207ENST00000537408 GSK3BP49841 420 aa10.67□□□□□ -0.7
CLSTN3-207ENST00000537408 PCDH1Q08174 1060 aa10.67□□□□□ -0.7
CLSTN3-207ENST00000537408 RIN1Q13671 783 aa10.67□□□□□ -0.7
CLSTN3-207ENST00000537408 CAPRIN1Q14444 709 aaKnown RBP10.67□□□□□ -0.7
CLSTN3-207ENST00000537408 PTPN20Q4JDL3 420 aa10.67□□□□□ -0.7
CLSTN3-207ENST00000537408 MPP7Q5T2T1 576 aa10.67□□□□□ -0.7
CLSTN3-207ENST00000537408 PPP1R26Q5T8A7 1209 aaPredicted RBP10.67□□□□□ -0.7
CLSTN3-207ENST00000537408 HEATR6Q6AI08 1181 aaKnown RBP10.67□□□□□ -0.7
CLSTN3-207ENST00000537408 ADGRG3Q86Y34 549 aa10.67□□□□□ -0.7
CLSTN3-207ENST00000537408 GPALPP1Q8IXQ4 340 aa10.67□□□□□ -0.7
CLSTN3-207ENST00000537408 GDPD1Q8N9F7 314 aa10.67□□□□□ -0.7
CLSTN3-207ENST00000537408 RTP4Q96DX8 246 aa10.67□□□□□ -0.7
CLSTN3-207ENST00000537408 FAM84AQ96KN4 292 aa10.67□□□□□ -0.7
CLSTN3-207ENST00000537408 ZSWIM3Q96MP5 696 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms