RNA–Protein interactions for RNA: ENST00000536398.5

UBE3B-206, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,120 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-206ENST00000536398 TMEM135Q86UB9 458 aa13.82□□□□□ -0.2
UBE3B-206ENST00000536398 KMT5CQ86Y97 462 aa13.82□□□□□ -0.2
UBE3B-206ENST00000536398 CILP2Q8IUL8 1156 aa13.82□□□□□ -0.2
UBE3B-206ENST00000536398 DENND6AQ8IWF6 608 aa13.82□□□□□ -0.2
UBE3B-206ENST00000536398 FAM20CQ8IXL6 584 aa13.82□□□□□ -0.2
UBE3B-206ENST00000536398 PPIL6Q8IXY8 311 aa13.82□□□□□ -0.2
UBE3B-206ENST00000536398 FLVCR1-AS1Q8TAF5 88 aa13.82□□□□□ -0.2
UBE3B-206ENST00000536398 ZNF501Q96CX3 271 aaPredicted RBP13.82□□□□□ -0.2
UBE3B-206ENST00000536398 PWWP2AQ96N64 755 aa13.82□□□□□ -0.2
UBE3B-206ENST00000536398 IL17FQ96PD4 163 aa13.82□□□□□ -0.2
UBE3B-206ENST00000536398 TRAPPC9Q96Q05 1148 aa13.82□□□□□ -0.2
UBE3B-206ENST00000536398 OR2A14Q96R47 310 aa13.82□□□□□ -0.2
UBE3B-206ENST00000536398 TSSK1BQ9BXA7 367 aa13.82□□□□□ -0.2
UBE3B-206ENST00000536398 GPN2Q9H9Y4 310 aaPredicted RBP13.82□□□□□ -0.2
UBE3B-206ENST00000536398 PDE7BQ9NP56 450 aa13.82□□□□□ -0.2
UBE3B-206ENST00000536398 C1GALT1Q9NS00 363 aa13.82□□□□□ -0.2
UBE3B-206ENST00000536398 SOHLH2Q9NX45 425 aa13.82□□□□□ -0.2
UBE3B-206ENST00000536398 SAMD15Q9P1V8 674 aa13.82□□□□□ -0.2
UBE3B-206ENST00000536398 ASIC3Q9UHC3 531 aa13.82□□□□□ -0.2
UBE3B-206ENST00000536398 PCYOX1Q9UHG3 505 aa13.82□□□□□ -0.2
UBE3B-206ENST00000536398 POLG2Q9UHN1 485 aa13.82□□□□□ -0.2
UBE3B-206ENST00000536398 TSR3Q9UJK0 312 aaKnown RBP13.82□□□□□ -0.2
UBE3B-206ENST00000536398 RUVBL2Q9Y230 463 aaKnown RBP13.82□□□□□ -0.2
UBE3B-206ENST00000536398 NFS1Q9Y697 457 aa13.82□□□□□ -0.2
UBE3B-206ENST00000536398 SAR1BQ9Y6B6 198 aa13.82□□□□□ -0.2
UBE3B-206ENST00000536398 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.82□□□□□ -0.2
UBE3B-206ENST00000536398 RPS6KL1Q9Y6S9 549 aa13.82□□□□□ -0.2
UBE3B-206ENST00000536398 MAGEB16A2A368 324 aa13.81□□□□□ -0.2
UBE3B-206ENST00000536398 C2orf74A8MZ97 194 aa13.81□□□□□ -0.2
UBE3B-206ENST00000536398 F8W8V4 182 aa13.81□□□□□ -0.2
UBE3B-206ENST00000536398 DNALI1O14645 258 aaPredicted RBP13.81□□□□□ -0.2
UBE3B-206ENST00000536398 UGT2B7P16662 529 aa13.81□□□□□ -0.2
UBE3B-206ENST00000536398 PEBP1P30086 187 aaKnown RBP13.81□□□□□ -0.2
UBE3B-206ENST00000536398 SHMT2P34897 504 aa13.81□□□□□ -0.2
UBE3B-206ENST00000536398 STAT5AP42229 794 aa13.81□□□□□ -0.2
UBE3B-206ENST00000536398 TUBB4BP68371 445 aa13.81□□□□□ -0.2
UBE3B-206ENST00000536398 ACY1Q03154 408 aa13.81□□□□□ -0.2
UBE3B-206ENST00000536398 CTBP1Q13363 440 aa13.81□□□□□ -0.2
UBE3B-206ENST00000536398 TUBB2AQ13885 445 aa13.81□□□□□ -0.2
UBE3B-206ENST00000536398 ZIC1Q15915 447 aa13.81□□□□□ -0.2
UBE3B-206ENST00000536398 TBR1Q16650 682 aa13.81□□□□□ -0.2
UBE3B-206ENST00000536398 CCSMST1Q4G0I0 132 aa13.81□□□□□ -0.2
UBE3B-206ENST00000536398 DNAJC21Q5F1R6 531 aaKnown RBP13.81□□□□□ -0.2
UBE3B-206ENST00000536398 ATP1A1-AS1Q5TC04 95 aa13.81□□□□□ -0.2
UBE3B-206ENST00000536398 SPESP1Q6UW49 350 aa13.81□□□□□ -0.2
UBE3B-206ENST00000536398 LRRC6Q86X45 466 aa13.81□□□□□ -0.2
UBE3B-206ENST00000536398 IGDCC3Q8IVU1 814 aa13.81□□□□□ -0.2
UBE3B-206ENST00000536398 ESX1Q8N693 406 aa13.81□□□□□ -0.2
UBE3B-206ENST00000536398 EXD3Q8N9H8 876 aa13.81□□□□□ -0.2
UBE3B-206ENST00000536398 ZSCAN1Q8NBB4 408 aa13.81□□□□□ -0.2
UBE3B-206ENST00000536398 SLC38A9Q8NBW4 561 aa13.81□□□□□ -0.2
UBE3B-206ENST00000536398 MENTQ9BUN1 341 aa13.81□□□□□ -0.2
UBE3B-206ENST00000536398 TUBB2BQ9BVA1 445 aa13.81□□□□□ -0.2
UBE3B-206ENST00000536398 PITPNM3Q9BZ71 974 aa13.81□□□□□ -0.2
UBE3B-206ENST00000536398 FAM60AQ9NP50 221 aa13.81□□□□□ -0.2
UBE3B-206ENST00000536398 CROTQ9UKG9 612 aa13.81□□□□□ -0.2
UBE3B-206ENST00000536398 BTRCQ9Y297 605 aa13.81□□□□□ -0.2
UBE3B-206ENST00000536398 BSNQ9UPA5 3926 aa13.81□□□□□ -0.2
UBE3B-206ENST00000536398 PIPSLA2A3N6 862 aa13.8□□□□□ -0.2
UBE3B-206ENST00000536398 EIF4E1BA6NMX2 242 aaKnown RBP13.8□□□□□ -0.2
UBE3B-206ENST00000536398 MATN2O00339 956 aa13.8□□□□□ -0.2
UBE3B-206ENST00000536398 TERTO14746 1132 aaKnown RBP13.8□□□□□ -0.2
UBE3B-206ENST00000536398 HCRTR1O43613 425 aa13.8□□□□□ -0.2
UBE3B-206ENST00000536398 PRKAR1AP10644 381 aa13.8□□□□□ -0.2
UBE3B-206ENST00000536398 DLSTP36957 453 aa13.8□□□□□ -0.2
UBE3B-206ENST00000536398 BDKRB1P46663 353 aa13.8□□□□□ -0.2
UBE3B-206ENST00000536398 MRPS25P82663 173 aaKnown RBP13.8□□□□□ -0.2
UBE3B-206ENST00000536398 DHX9Q08211 1270 aaKnown RBP13.8□□□□□ -0.2
UBE3B-206ENST00000536398 MAP7Q14244 749 aa13.8□□□□□ -0.2
UBE3B-206ENST00000536398 KYNUQ16719 465 aa13.8□□□□□ -0.2
UBE3B-206ENST00000536398 IZUMO3Q5VZ72 239 aa13.8□□□□□ -0.2
UBE3B-206ENST00000536398 ZNF470Q6ECI4 717 aa13.8□□□□□ -0.2
UBE3B-206ENST00000536398 FAM199XQ6PEV8 388 aaPredicted RBP13.8□□□□□ -0.2
UBE3B-206ENST00000536398 OTOAQ7RTW8 1153 aa13.8□□□□□ -0.2
UBE3B-206ENST00000536398 CARFQ8N187 725 aa13.8□□□□□ -0.2
UBE3B-206ENST00000536398 LINC01555Q8NAE3 123 aa13.8□□□□□ -0.2
UBE3B-206ENST00000536398 OR1L3Q8NH93 324 aa13.8□□□□□ -0.2
UBE3B-206ENST00000536398 SLCO2A1Q92959 643 aa13.8□□□□□ -0.2
UBE3B-206ENST00000536398 STAMBPL1Q96FJ0 436 aa13.8□□□□□ -0.2
UBE3B-206ENST00000536398 SLC45A3Q96JT2 553 aa13.8□□□□□ -0.2
UBE3B-206ENST00000536398 PANX3Q96QZ0 392 aa13.8□□□□□ -0.2
UBE3B-206ENST00000536398 RUFY1Q96T51 708 aa13.8□□□□□ -0.2
UBE3B-206ENST00000536398 TCF12Q99081 682 aa13.8□□□□□ -0.2
UBE3B-206ENST00000536398 SLC30A3Q99726 388 aa13.8□□□□□ -0.2
UBE3B-206ENST00000536398 TWSG1Q9GZX9 223 aa13.8□□□□□ -0.2
UBE3B-206ENST00000536398 FBXO6Q9NRD1 293 aaPredicted RBP13.8□□□□□ -0.2
UBE3B-206ENST00000536398 KCND1Q9NSA2 647 aa13.8□□□□□ -0.2
UBE3B-206ENST00000536398 C20orf96Q9NUD7 363 aaPredicted RBP13.8□□□□□ -0.2
UBE3B-206ENST00000536398 KLHL20Q9Y2M5 609 aa13.8□□□□□ -0.2
UBE3B-206ENST00000536398 ATRXP46100 2492 aa13.79□□□□□ -0.2
UBE3B-206ENST00000536398 CTAGE9A4FU28 777 aa13.79□□□□□ -0.2
UBE3B-206ENST00000536398 ISM1B1AKI9 464 aa13.79□□□□□ -0.2
UBE3B-206ENST00000536398 TMEM150CB9EJG8 249 aa13.79□□□□□ -0.2
UBE3B-206ENST00000536398 TK2O00142 265 aa13.79□□□□□ -0.2
UBE3B-206ENST00000536398 SCRG1O75711 98 aa13.79□□□□□ -0.2
UBE3B-206ENST00000536398 USP1O94782 785 aa13.79□□□□□ -0.2
UBE3B-206ENST00000536398 ESR1P03372 595 aa13.79□□□□□ -0.2
UBE3B-206ENST00000536398 CTSBP07858 339 aa13.79□□□□□ -0.2
UBE3B-206ENST00000536398 PKMP14618 531 aaKnown RBP13.79□□□□□ -0.2
UBE3B-206ENST00000536398 PAMP19021 973 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms