RNA–Protein interactions for RNA: ENST00000536255.6

RPAIN-205, Transcript of RPA interacting protein, humanhuman

TSL 1 (best) BASIC

Gene RPAIN, Length 1,057 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-205ENST00000536255 LRRC8EQ6NSJ5 796 aa13.17□□□□□ -0.3
RPAIN-205ENST00000536255 DUS1LQ6P1R4 473 aaKnown RBP13.17□□□□□ -0.3
RPAIN-205ENST00000536255 TTC23LQ6PF05 361 aa13.17□□□□□ -0.3
RPAIN-205ENST00000536255 UNC5DQ6UXZ4 953 aa13.17□□□□□ -0.3
RPAIN-205ENST00000536255 NEK10Q6ZWH5 1172 aa13.17□□□□□ -0.3
RPAIN-205ENST00000536255 ZC3HC1Q86WB0 502 aaKnown RBP13.17□□□□□ -0.3
RPAIN-205ENST00000536255 OR5K2Q8NHB8 316 aa13.17□□□□□ -0.3
RPAIN-205ENST00000536255 MAGEC3Q8TD91 643 aa13.17□□□□□ -0.3
RPAIN-205ENST00000536255 FBF1Q8TES7 1133 aa13.17□□□□□ -0.3
RPAIN-205ENST00000536255 CYTH2Q99418 400 aa13.17□□□□□ -0.3
RPAIN-205ENST00000536255 NDNQ99608 321 aa13.17□□□□□ -0.3
RPAIN-205ENST00000536255 GPR21Q99679 349 aa13.17□□□□□ -0.3
RPAIN-205ENST00000536255 CDC42EP4Q9H3Q1 356 aaKnown RBP13.17□□□□□ -0.3
RPAIN-205ENST00000536255 RHOJQ9H4E5 214 aa13.17□□□□□ -0.3
RPAIN-205ENST00000536255 NINJ2Q9NZG7 142 aa13.17□□□□□ -0.3
RPAIN-205ENST00000536255 OGFRQ9NZT2 677 aa13.17□□□□□ -0.3
RPAIN-205ENST00000536255 SLC17A6Q9P2U8 582 aa13.17□□□□□ -0.3
RPAIN-205ENST00000536255 SLC24A2Q9UI40 661 aa13.17□□□□□ -0.3
RPAIN-205ENST00000536255 VWA7Q9Y334 891 aa13.17□□□□□ -0.3
RPAIN-205ENST00000536255 MN1Q10571 1320 aaPredicted RBP13.16□□□□□ -0.3
RPAIN-205ENST00000536255 DSPP15924 2871 aaKnown RBP13.16□□□□□ -0.3
RPAIN-205ENST00000536255 ZFHX4Q86UP3 3567 aa13.16□□□□□ -0.3
RPAIN-205ENST00000536255 ACSL3O95573 720 aa13.16□□□□□ -0.3
RPAIN-205ENST00000536255 CCL4P13236 92 aa13.16□□□□□ -0.3
RPAIN-205ENST00000536255 TYRP1P17643 537 aa13.16□□□□□ -0.3
RPAIN-205ENST00000536255 MCM3P25205 808 aa13.16□□□□□ -0.3
RPAIN-205ENST00000536255 CSTF2P33240 577 aaKnown RBP eCLIP13.16□□□□□ -0.3
RPAIN-205ENST00000536255 ETV5P41161 510 aa13.16□□□□□ -0.3
RPAIN-205ENST00000536255 CAPZBP47756 277 aa13.16□□□□□ -0.3
RPAIN-205ENST00000536255 RGS4P49798 205 aa13.16□□□□□ -0.3
RPAIN-205ENST00000536255 ABRQ12979 859 aa13.16□□□□□ -0.3
RPAIN-205ENST00000536255 PDAP1Q13442 181 aaKnown RBP13.16□□□□□ -0.3
RPAIN-205ENST00000536255 GBX1Q14549 363 aa13.16□□□□□ -0.3
RPAIN-205ENST00000536255 KBTBD12Q3ZCT8 623 aa13.16□□□□□ -0.3
RPAIN-205ENST00000536255 GRTP1Q5TC63 336 aa13.16□□□□□ -0.3
RPAIN-205ENST00000536255 HECTD2Q5U5R9 776 aa13.16□□□□□ -0.3
RPAIN-205ENST00000536255 LRRC69Q6ZNQ3 347 aa13.16□□□□□ -0.3
RPAIN-205ENST00000536255 TRMT10CQ7L0Y3 403 aaKnown RBP13.16□□□□□ -0.3
RPAIN-205ENST00000536255 PLXDC1Q8IUK5 500 aa13.16□□□□□ -0.3
RPAIN-205ENST00000536255 VRK3Q8IV63 474 aa13.16□□□□□ -0.3
RPAIN-205ENST00000536255 DCUN1D3Q8IWE4 304 aa13.16□□□□□ -0.3
RPAIN-205ENST00000536255 PPM1NQ8N819 430 aa13.16□□□□□ -0.3
RPAIN-205ENST00000536255 SIDT2Q8NBJ9 832 aaKnown RBP13.16□□□□□ -0.3
RPAIN-205ENST00000536255 AGBL5Q8NDL9 886 aa13.16□□□□□ -0.3
RPAIN-205ENST00000536255 CFAP61Q8NHU2 1237 aa13.16□□□□□ -0.3
RPAIN-205ENST00000536255 CD200R1Q8TD46 325 aa13.16□□□□□ -0.3
RPAIN-205ENST00000536255 HNRNPLLQ8WVV9 542 aaKnown RBP13.16□□□□□ -0.3
RPAIN-205ENST00000536255 LCN9Q8WX39 176 aa13.16□□□□□ -0.3
RPAIN-205ENST00000536255 UBXN4Q92575 508 aa13.16□□□□□ -0.3
RPAIN-205ENST00000536255 VPS39Q96JC1 886 aa13.16□□□□□ -0.3
RPAIN-205ENST00000536255 ELMO2Q96JJ3 720 aa13.16□□□□□ -0.3
RPAIN-205ENST00000536255 HGH1Q9BTY7 390 aa13.16□□□□□ -0.3
RPAIN-205ENST00000536255 MED16Q9Y2X0 877 aa13.16□□□□□ -0.3
RPAIN-205ENST00000536255 PSAT1Q9Y617 370 aa13.16□□□□□ -0.3
RPAIN-205ENST00000536255 KIF26BQ2KJY2 2108 aa13.15□□□□□ -0.3
RPAIN-205ENST00000536255 FAM95CA0A1B0GW59 222 aa13.15□□□□□ -0.3
RPAIN-205ENST00000536255 CXorf49A8MYA2 514 aaPredicted RBP13.15□□□□□ -0.3
RPAIN-205ENST00000536255 NVLO15381 856 aaKnown RBP13.15□□□□□ -0.3
RPAIN-205ENST00000536255 SLC5A2P31639 672 aa13.15□□□□□ -0.3
RPAIN-205ENST00000536255 SPRP35270 261 aaPredicted RBP13.15□□□□□ -0.3
RPAIN-205ENST00000536255 CCNFP41002 786 aa13.15□□□□□ -0.3
RPAIN-205ENST00000536255 ABCG1P45844 678 aa13.15□□□□□ -0.3
RPAIN-205ENST00000536255 MAPK10P53779 464 aa13.15□□□□□ -0.3
RPAIN-205ENST00000536255 SLC12A2P55011 1212 aa13.15□□□□□ -0.3
RPAIN-205ENST00000536255 PRKAA1Q13131 559 aa13.15□□□□□ -0.3
RPAIN-205ENST00000536255 KLHL38Q2WGJ6 581 aa13.15□□□□□ -0.3
RPAIN-205ENST00000536255 SNAP47Q5SQN1 464 aa13.15□□□□□ -0.3
RPAIN-205ENST00000536255 RBM20Q5T481 1227 aaKnown RBP13.15□□□□□ -0.3
RPAIN-205ENST00000536255 ARMC6Q6NXE6 501 aa13.15□□□□□ -0.3
RPAIN-205ENST00000536255 C19orf48Q6RUI8 117 aa13.15□□□□□ -0.3
RPAIN-205ENST00000536255 ARHGAP22Q7Z5H3 698 aa13.15□□□□□ -0.3
RPAIN-205ENST00000536255 OOSP2Q86WS3 158 aa13.15□□□□□ -0.3
RPAIN-205ENST00000536255 RAB42Q8N4Z0 105 aa13.15□□□□□ -0.3
RPAIN-205ENST00000536255 PHC3Q8NDX5 983 aa13.15□□□□□ -0.3
RPAIN-205ENST00000536255 OR5AR1Q8NGP9 310 aa13.15□□□□□ -0.3
RPAIN-205ENST00000536255 KCNE4Q8WWG9 221 aa13.15□□□□□ -0.3
RPAIN-205ENST00000536255 RSC1A1Q92681 617 aa13.15□□□□□ -0.3
RPAIN-205ENST00000536255 NAF1Q96HR8 494 aaKnown RBP13.15□□□□□ -0.3
RPAIN-205ENST00000536255 RBBP8Q99708 897 aa13.15□□□□□ -0.3
RPAIN-205ENST00000536255 FUT8Q9BYC5 575 aa13.15□□□□□ -0.3
RPAIN-205ENST00000536255 SRMSQ9H3Y6 488 aa13.15□□□□□ -0.3
RPAIN-205ENST00000536255 TFB2MQ9H5Q4 396 aaKnown RBP13.15□□□□□ -0.3
RPAIN-205ENST00000536255 ACSS3Q9H6R3 686 aa13.15□□□□□ -0.3
RPAIN-205ENST00000536255 SMYD2Q9NRG4 433 aa13.15□□□□□ -0.3
RPAIN-205ENST00000536255 GALPQ9UBC7 116 aa13.15□□□□□ -0.3
RPAIN-205ENST00000536255 KLHL3Q9UH77 587 aa13.15□□□□□ -0.3
RPAIN-205ENST00000536255 URB1O60287 2271 aaKnown RBP13.15□□□□□ -0.3
RPAIN-205ENST00000536255 CFAP47Q6ZTR5 3102 aa13.14□□□□□ -0.31
RPAIN-205ENST00000536255 A0A087WUV0 522 aaPredicted RBP13.14□□□□□ -0.31
RPAIN-205ENST00000536255 A8MU76 341 aa13.14□□□□□ -0.31
RPAIN-205ENST00000536255 MATN2O00339 956 aa13.14□□□□□ -0.31
RPAIN-205ENST00000536255 CAPN5O15484 640 aaPredicted RBP13.14□□□□□ -0.31
RPAIN-205ENST00000536255 PRAMEF10O60809 474 aa13.14□□□□□ -0.31
RPAIN-205ENST00000536255 MATN4O95460 622 aa13.14□□□□□ -0.31
RPAIN-205ENST00000536255 C9P02748 559 aa13.14□□□□□ -0.31
RPAIN-205ENST00000536255 ANKRD34CP0C6C1 535 aa13.14□□□□□ -0.31
RPAIN-205ENST00000536255 MPC1LP0DKB6 136 aa13.14□□□□□ -0.31
RPAIN-205ENST00000536255 FGF3P11487 239 aaPredicted RBP13.14□□□□□ -0.31
RPAIN-205ENST00000536255 FDXRP22570 491 aa13.14□□□□□ -0.31
RPAIN-205ENST00000536255 ITPKBP27987 946 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms