RNA–Protein interactions for RNA: ENST00000536107.5

YBX3-205, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 438 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-205ENST00000536107 POLD2P49005 469 aa3.85□□□□□ -1.79
YBX3-205ENST00000536107 TBX4P57082 545 aa3.85□□□□□ -1.79
YBX3-205ENST00000536107 SLC8A3P57103 927 aa3.85□□□□□ -1.79
YBX3-205ENST00000536107 MYL6P60660 151 aa3.85□□□□□ -1.79
YBX3-205ENST00000536107 TUBA4AP68366 448 aa3.85□□□□□ -1.79
YBX3-205ENST00000536107 GTF2BQ00403 316 aa3.85□□□□□ -1.79
YBX3-205ENST00000536107 APBA1Q02410 837 aa3.85□□□□□ -1.79
YBX3-205ENST00000536107 NFATC2Q13469 925 aa3.85□□□□□ -1.79
YBX3-205ENST00000536107 PEX6Q13608 980 aa3.85□□□□□ -1.79
YBX3-205ENST00000536107 SLC12A1Q13621 1099 aa3.85□□□□□ -1.79
YBX3-205ENST00000536107 PCBP2Q15366 365 aaKnown RBP eCLIP3.85□□□□□ -1.79
YBX3-205ENST00000536107 ZACNQ401N2 412 aa3.85□□□□□ -1.79
YBX3-205ENST00000536107 MS4A13Q5J8X5 152 aa3.85□□□□□ -1.79
YBX3-205ENST00000536107 Q5PR19 223 aa3.85□□□□□ -1.79
YBX3-205ENST00000536107 C10orf62Q5T681 223 aaPredicted RBP3.85□□□□□ -1.79
YBX3-205ENST00000536107 FAM69BQ5VUD6 431 aa3.85□□□□□ -1.79
YBX3-205ENST00000536107 BLOC1S2Q6QNY1 142 aa3.85□□□□□ -1.79
YBX3-205ENST00000536107 WDR74Q6RFH5 385 aaPredicted RBP3.85□□□□□ -1.79
YBX3-205ENST00000536107 PAMR1Q6UXH9 720 aa3.85□□□□□ -1.79
YBX3-205ENST00000536107 KCNK18Q7Z418 384 aa3.85□□□□□ -1.79
YBX3-205ENST00000536107 CHSY1Q86X52 802 aa3.85□□□□□ -1.79
YBX3-205ENST00000536107 CDC20BQ86Y33 519 aa3.85□□□□□ -1.79
YBX3-205ENST00000536107 ZZZ3Q8IYH5 903 aa3.85□□□□□ -1.79
YBX3-205ENST00000536107 ZBTB2Q8N680 514 aa3.85□□□□□ -1.79
YBX3-205ENST00000536107 ENDOVQ8N8Q3 282 aaKnown RBP3.85□□□□□ -1.79
YBX3-205ENST00000536107 IGSF22Q8N9C0 903 aa3.85□□□□□ -1.79
YBX3-205ENST00000536107 OR56A4Q8NGH8 313 aa3.85□□□□□ -1.79
YBX3-205ENST00000536107 OR1N1Q8NGS0 311 aa3.85□□□□□ -1.79
YBX3-205ENST00000536107 PPP4R1Q8TF05 950 aa3.85□□□□□ -1.79
YBX3-205ENST00000536107 NR4A3Q92570 626 aa3.85□□□□□ -1.79
YBX3-205ENST00000536107 TFAP2CQ92754 450 aa3.85□□□□□ -1.79
YBX3-205ENST00000536107 SYAP1Q96A49 352 aaPredicted RBP3.85□□□□□ -1.79
YBX3-205ENST00000536107 RAB7BQ96AH8 199 aa3.85□□□□□ -1.79
YBX3-205ENST00000536107 SH3KBP1Q96B97 665 aa3.85□□□□□ -1.79
YBX3-205ENST00000536107 ARHGEF26Q96DR7 871 aa3.85□□□□□ -1.79
YBX3-205ENST00000536107 CYFIP2Q96F07 1278 aa3.85□□□□□ -1.79
YBX3-205ENST00000536107 BOD1Q96IK1 185 aa3.85□□□□□ -1.79
YBX3-205ENST00000536107 TREX2Q9BQ50 279 aaPredicted RBP3.85□□□□□ -1.79
YBX3-205ENST00000536107 AIFM2Q9BRQ8 373 aa3.85□□□□□ -1.79
YBX3-205ENST00000536107 DHRS4Q9BTZ2 278 aa3.85□□□□□ -1.79
YBX3-205ENST00000536107 GSDMCQ9BYG8 508 aa3.85□□□□□ -1.79
YBX3-205ENST00000536107 PCIF1Q9H4Z3 704 aa3.85□□□□□ -1.79
YBX3-205ENST00000536107 STN1Q9H668 368 aaKnown RBP3.85□□□□□ -1.79
YBX3-205ENST00000536107 EPS8L2Q9H6S3 715 aa3.85□□□□□ -1.79
YBX3-205ENST00000536107 AKIRIN1Q9H9L7 192 aaPredicted RBP3.85□□□□□ -1.79
YBX3-205ENST00000536107 PNPLA8Q9NP80 782 aa3.85□□□□□ -1.79
YBX3-205ENST00000536107 KCND2Q9NZV8 630 aa3.85□□□□□ -1.79
YBX3-205ENST00000536107 IL17CQ9P0M4 197 aa3.85□□□□□ -1.79
YBX3-205ENST00000536107 TAAR2Q9P1P5 351 aa3.85□□□□□ -1.79
YBX3-205ENST00000536107 EXOC7Q9UPT5 735 aa3.85□□□□□ -1.79
YBX3-205ENST00000536107 MEMO1Q9Y316 297 aa3.85□□□□□ -1.79
YBX3-205ENST00000536107 CYP46A1Q9Y6A2 500 aa3.85□□□□□ -1.79
YBX3-205ENST00000536107 STYXL1Q9Y6J8 313 aa3.85□□□□□ -1.79
YBX3-205ENST00000536107 DGKBQ9Y6T7 804 aa3.85□□□□□ -1.79
YBX3-205ENST00000536107 TCHHQ07283 1943 aa3.84□□□□□ -1.79
YBX3-205ENST00000536107 CCDC78A2IDD5 438 aa3.84□□□□□ -1.79
YBX3-205ENST00000536107 NKX2-6A6NCS4 301 aa3.84□□□□□ -1.79
YBX3-205ENST00000536107 TMEM202A6NGA9 273 aa3.84□□□□□ -1.79
YBX3-205ENST00000536107 TRIM64A6NGJ6 449 aa3.84□□□□□ -1.79
YBX3-205ENST00000536107 TRIM64BA6NI03 449 aa3.84□□□□□ -1.79
YBX3-205ENST00000536107 ZNF233A6NK53 670 aa3.84□□□□□ -1.79
YBX3-205ENST00000536107 C16orf96A6NNT2 1141 aa3.84□□□□□ -1.79
YBX3-205ENST00000536107 IDSB3KWA1 339 aa3.84□□□□□ -1.79
YBX3-205ENST00000536107 K7ERQ8 282 aa3.84□□□□□ -1.79
YBX3-205ENST00000536107 SOCS6O14544 535 aa3.84□□□□□ -1.79
YBX3-205ENST00000536107 DTNBO60941 627 aa3.84□□□□□ -1.79
YBX3-205ENST00000536107 ZBED1O96006 694 aa3.84□□□□□ -1.79
YBX3-205ENST00000536107 MT-CO1P00395 513 aa3.84□□□□□ -1.79
YBX3-205ENST00000536107 IGHEP01854 428 aa3.84□□□□□ -1.79
YBX3-205ENST00000536107 KLK3P07288 261 aaPredicted RBP3.84□□□□□ -1.79
YBX3-205ENST00000536107 P4HA1P13674 534 aa3.84□□□□□ -1.79
YBX3-205ENST00000536107 GSPT1P15170 499 aaKnown RBP3.84□□□□□ -1.79
YBX3-205ENST00000536107 CD19P15391 556 aa3.84□□□□□ -1.79
YBX3-205ENST00000536107 IDSP22304 550 aa3.84□□□□□ -1.79
YBX3-205ENST00000536107 UGT1A4P22310 534 aa3.84□□□□□ -1.79
YBX3-205ENST00000536107 XPAP23025 273 aaPredicted RBP3.84□□□□□ -1.79
YBX3-205ENST00000536107 RRM1P23921 792 aa3.84□□□□□ -1.79
YBX3-205ENST00000536107 AK4P27144 223 aaPredicted RBP3.84□□□□□ -1.79
YBX3-205ENST00000536107 ATICP31939 592 aa3.84□□□□□ -1.79
YBX3-205ENST00000536107 MECP2P51608 486 aaKnown RBP3.84□□□□□ -1.79
YBX3-205ENST00000536107 TKTL1P51854 596 aa3.84□□□□□ -1.79
YBX3-205ENST00000536107 TDGF1P3P51864 188 aa3.84□□□□□ -1.79
YBX3-205ENST00000536107 NUCB1Q02818 461 aa3.84□□□□□ -1.79
YBX3-205ENST00000536107 BIRC3Q13489 604 aa3.84□□□□□ -1.79
YBX3-205ENST00000536107 HDAC1Q13547 482 aaPredicted RBP3.84□□□□□ -1.79
YBX3-205ENST00000536107 KLF9Q13886 244 aaPredicted RBP3.84□□□□□ -1.79
YBX3-205ENST00000536107 SEPT7Q16181 437 aaKnown RBP3.84□□□□□ -1.79
YBX3-205ENST00000536107 ZNF699Q32M78 642 aa3.84□□□□□ -1.79
YBX3-205ENST00000536107 ZNF667Q5HYK9 610 aa3.84□□□□□ -1.79
YBX3-205ENST00000536107 LRRC73Q5JTD7 316 aa3.84□□□□□ -1.79
YBX3-205ENST00000536107 AGAP7PQ5VUJ5 663 aa3.84□□□□□ -1.79
YBX3-205ENST00000536107 BSPRYQ5W0U4 402 aa3.84□□□□□ -1.79
YBX3-205ENST00000536107 RAP1GAP2Q684P5 730 aa3.84□□□□□ -1.79
YBX3-205ENST00000536107 KCTD16Q68DU8 428 aa3.84□□□□□ -1.79
YBX3-205ENST00000536107 ZNF626Q68DY1 528 aa3.84□□□□□ -1.79
YBX3-205ENST00000536107 NADSYN1Q6IA69 706 aa3.84□□□□□ -1.79
YBX3-205ENST00000536107 TIGD7Q6NT04 549 aaPredicted RBP3.84□□□□□ -1.79
YBX3-205ENST00000536107 CYB5D1Q6P9G0 228 aa3.84□□□□□ -1.79
YBX3-205ENST00000536107 ABHD17CQ6PCB6 329 aa3.84□□□□□ -1.79
YBX3-205ENST00000536107 MYO7BQ6PIF6 2116 aa3.84□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms