RNA–Protein interactions for RNA: ENST00000535927.5

VAMP1-205, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 4

Gene VAMP1, Length 578 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-205ENST00000535927 MAGOHP61326 146 aaKnown RBP15.82■□□□□ 0.12
VAMP1-205ENST00000535927 ASPHQ12797 758 aa15.82■□□□□ 0.12
VAMP1-205ENST00000535927 BNIP3Q12983 259 aa15.82■□□□□ 0.12
VAMP1-205ENST00000535927 SEPT7Q16181 437 aaKnown RBP15.82■□□□□ 0.12
VAMP1-205ENST00000535927 SBSNQ6UWP8 590 aa15.82■□□□□ 0.12
VAMP1-205ENST00000535927 PIWIL4Q7Z3Z4 852 aaKnown RBP15.82■□□□□ 0.12
VAMP1-205ENST00000535927 GPSM1Q86YR5 675 aa15.82■□□□□ 0.12
VAMP1-205ENST00000535927 SLC22A9Q8IVM8 553 aa15.82■□□□□ 0.12
VAMP1-205ENST00000535927 TRIM48Q8IWZ4 208 aa15.82■□□□□ 0.12
VAMP1-205ENST00000535927 NAGSQ8N159 534 aa15.82■□□□□ 0.12
VAMP1-205ENST00000535927 ARFGAP2Q8N6H7 521 aa15.82■□□□□ 0.12
VAMP1-205ENST00000535927 SREK1Q8WXA9 508 aaKnown RBP15.82■□□□□ 0.12
VAMP1-205ENST00000535927 FERD3LQ96RJ6 166 aa15.82■□□□□ 0.12
VAMP1-205ENST00000535927 GTPBP2Q9BX10 602 aaKnown RBP15.82■□□□□ 0.12
VAMP1-205ENST00000535927 SLC40A1Q9NP59 571 aa15.82■□□□□ 0.12
VAMP1-205ENST00000535927 SPATA7Q9P0W8 599 aa15.82■□□□□ 0.12
VAMP1-205ENST00000535927 RNF112Q9ULX5 631 aa15.82■□□□□ 0.12
VAMP1-205ENST00000535927 WDR37Q9Y2I8 494 aa15.82■□□□□ 0.12
VAMP1-205ENST00000535927 DMXL1Q9Y485 3027 aa15.82■□□□□ 0.12
VAMP1-205ENST00000535927 ANKRD12Q6UB98 2062 aa15.82■□□□□ 0.12
VAMP1-205ENST00000535927 SPTBN2O15020 2390 aa15.82■□□□□ 0.12
VAMP1-205ENST00000535927 BPTFQ12830 3046 aa15.81■□□□□ 0.12
VAMP1-205ENST00000535927 MYO1CO00159 1063 aa15.81■□□□□ 0.12
VAMP1-205ENST00000535927 NUDT21O43809 227 aaKnown RBP15.81■□□□□ 0.12
VAMP1-205ENST00000535927 S100BP04271 92 aaPredicted RBP15.81■□□□□ 0.12
VAMP1-205ENST00000535927 ANXA5P08758 320 aa15.81■□□□□ 0.12
VAMP1-205ENST00000535927 SLC19A1P41440 591 aa15.81■□□□□ 0.12
VAMP1-205ENST00000535927 UBE2IP63279 158 aaKnown RBP15.81■□□□□ 0.12
VAMP1-205ENST00000535927 SPEM2Q0P670 501 aa15.81■□□□□ 0.12
VAMP1-205ENST00000535927 DLG1Q12959 904 aa15.81■□□□□ 0.12
VAMP1-205ENST00000535927 C14orf28Q4W4Y0 310 aa15.81■□□□□ 0.12
VAMP1-205ENST00000535927 TECRLQ5HYJ1 363 aa15.81■□□□□ 0.12
VAMP1-205ENST00000535927 PRAMEF14Q5SWL7 426 aa15.81■□□□□ 0.12
VAMP1-205ENST00000535927 SULT1C3Q6IMI6 304 aa15.81■□□□□ 0.12
VAMP1-205ENST00000535927 KLHL35Q6PF15 583 aa15.81■□□□□ 0.12
VAMP1-205ENST00000535927 NAPRTQ6XQN6 538 aa15.81■□□□□ 0.12
VAMP1-205ENST00000535927 FRA10AC1Q70Z53 315 aa15.81■□□□□ 0.12
VAMP1-205ENST00000535927 KIAA2013Q8IYS2 634 aa15.81■□□□□ 0.12
VAMP1-205ENST00000535927 C4orf33Q8N1A6 199 aa15.81■□□□□ 0.12
VAMP1-205ENST00000535927 PLD6Q8N2A8 252 aaKnown RBP15.81■□□□□ 0.12
VAMP1-205ENST00000535927 OR9A1PQ8NGU1 263 aa15.81■□□□□ 0.12
VAMP1-205ENST00000535927 ARL8AQ96BM9 186 aa15.81■□□□□ 0.12
VAMP1-205ENST00000535927 SCYL1Q96KG9 808 aa15.81■□□□□ 0.12
VAMP1-205ENST00000535927 CNOT10Q9H9A5 744 aaKnown RBP15.81■□□□□ 0.12
VAMP1-205ENST00000535927 NKIRAS1Q9NYS0 192 aa15.81■□□□□ 0.12
VAMP1-205ENST00000535927 NUDT4Q9NZJ9 180 aa15.81■□□□□ 0.12
VAMP1-205ENST00000535927 ZNF624Q9P2J8 865 aaPredicted RBP15.81■□□□□ 0.12
VAMP1-205ENST00000535927 FAM8A1Q9UBU6 413 aa15.81■□□□□ 0.12
VAMP1-205ENST00000535927 PSMD13Q9UNM6 376 aa15.81■□□□□ 0.12
VAMP1-205ENST00000535927 TNPO3Q9Y5L0 923 aaKnown RBP15.81■□□□□ 0.12
VAMP1-205ENST00000535927 KLK8O60259 260 aa15.8■□□□□ 0.12
VAMP1-205ENST00000535927 NOBOXO60393 691 aa15.8■□□□□ 0.12
VAMP1-205ENST00000535927 PLIN3O60664 434 aa15.8■□□□□ 0.12
VAMP1-205ENST00000535927 SMIM24O75264 130 aa15.8■□□□□ 0.12
VAMP1-205ENST00000535927 IPO13O94829 963 aaKnown RBP15.8■□□□□ 0.12
VAMP1-205ENST00000535927 FKBP9O95302 570 aa15.8■□□□□ 0.12
VAMP1-205ENST00000535927 GIMD1P0DJR0 217 aa15.8■□□□□ 0.12
VAMP1-205ENST00000535927 GLB1P16278 677 aa15.8■□□□□ 0.12
VAMP1-205ENST00000535927 CCND1P24385 295 aa15.8■□□□□ 0.12
VAMP1-205ENST00000535927 LIMK1P53667 647 aa15.8■□□□□ 0.12
VAMP1-205ENST00000535927 EPHA4P54764 986 aa15.8■□□□□ 0.12
VAMP1-205ENST00000535927 IRF9Q00978 393 aa15.8■□□□□ 0.12
VAMP1-205ENST00000535927 BIRC2Q13490 618 aa15.8■□□□□ 0.12
VAMP1-205ENST00000535927 PUM1Q14671 1186 aaKnown RBP eCLIP15.8■□□□□ 0.12
VAMP1-205ENST00000535927 TGFBIQ15582 683 aa15.8■□□□□ 0.12
VAMP1-205ENST00000535927 TSNQ15631 228 aaKnown RBP15.8■□□□□ 0.12
VAMP1-205ENST00000535927 CLPPQ16740 277 aaPredicted RBP15.8■□□□□ 0.12
VAMP1-205ENST00000535927 PPP1R3AQ16821 1122 aa15.8■□□□□ 0.12
VAMP1-205ENST00000535927 CHCHD2P9Q5T1J5 151 aaPredicted RBP15.8■□□□□ 0.12
VAMP1-205ENST00000535927 N4BP2L1Q5TBK1 243 aaPredicted RBP15.8■□□□□ 0.12
VAMP1-205ENST00000535927 PRR23CQ6ZRP0 262 aa15.8■□□□□ 0.12
VAMP1-205ENST00000535927 ARL14Q8N4G2 192 aa15.8■□□□□ 0.12
VAMP1-205ENST00000535927 SPDYE1Q8NFV5 336 aaPredicted RBP15.8■□□□□ 0.12
VAMP1-205ENST00000535927 CFAP61Q8NHU2 1237 aa15.8■□□□□ 0.12
VAMP1-205ENST00000535927 HMGCLL1Q8TB92 370 aa15.8■□□□□ 0.12
VAMP1-205ENST00000535927 NAT6Q93015 286 aa15.8■□□□□ 0.12
VAMP1-205ENST00000535927 FBXL8Q96CD0 374 aa15.8■□□□□ 0.12
VAMP1-205ENST00000535927 ATOH8Q96SQ7 321 aa15.8■□□□□ 0.12
VAMP1-205ENST00000535927 PCBD2Q9H0N5 130 aa15.8■□□□□ 0.12
VAMP1-205ENST00000535927 ALG9Q9H6U8 611 aa15.8■□□□□ 0.12
VAMP1-205ENST00000535927 KCNK9Q9NPC2 374 aa15.8■□□□□ 0.12
VAMP1-205ENST00000535927 IMP3Q9NV31 184 aaKnown RBP15.8■□□□□ 0.12
VAMP1-205ENST00000535927 UCKL1Q9NWZ5 548 aa15.8■□□□□ 0.12
VAMP1-205ENST00000535927 OR6C2Q9NZP2 312 aa15.8■□□□□ 0.12
VAMP1-205ENST00000535927 TMEM216Q9P0N5 145 aa15.8■□□□□ 0.12
VAMP1-205ENST00000535927 PDE10AQ9Y233 779 aa15.8■□□□□ 0.12
VAMP1-205ENST00000535927 PCM1Q15154 2024 aa15.8■□□□□ 0.12
VAMP1-205ENST00000535927 ACACBO00763 2458 aa15.79■□□□□ 0.12
VAMP1-205ENST00000535927 MED19A0JLT2 244 aaPredicted RBP15.79■□□□□ 0.12
VAMP1-205ENST00000535927 LILRA5A6NI73 299 aa15.79■□□□□ 0.12
VAMP1-205ENST00000535927 ARHGEF33A8MVX0 844 aa15.79■□□□□ 0.12
VAMP1-205ENST00000535927 TARM1B6A8C7 271 aa15.79■□□□□ 0.12
VAMP1-205ENST00000535927 STX16-NPEPL1H3BU86 382 aa15.79■□□□□ 0.12
VAMP1-205ENST00000535927 CDC7O00311 574 aa15.79■□□□□ 0.12
VAMP1-205ENST00000535927 MATN2O00339 956 aa15.79■□□□□ 0.12
VAMP1-205ENST00000535927 CDX4O14627 284 aaPredicted RBP15.79■□□□□ 0.12
VAMP1-205ENST00000535927 STX16O14662 325 aa15.79■□□□□ 0.12
VAMP1-205ENST00000535927 BIRC5O15392 142 aa15.79■□□□□ 0.12
VAMP1-205ENST00000535927 FFAR2O15552 330 aa15.79■□□□□ 0.12
VAMP1-205ENST00000535927 SDC3O75056 442 aa15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms