RNA–Protein interactions for RNA: ENST00000535668.1

CLSTN3-206, Transcript of calsyntenin 3, humanhuman

TSL 3

Gene CLSTN3, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-206ENST00000535668 ZNF449Q6P9G9 518 aa10.83□□□□□ -0.68
CLSTN3-206ENST00000535668 CDKL3Q8IVW4 592 aaPredicted RBP10.83□□□□□ -0.68
CLSTN3-206ENST00000535668 GPR135Q8IZ08 494 aa10.83□□□□□ -0.68
CLSTN3-206ENST00000535668 SLC34A3Q8N130 599 aa10.83□□□□□ -0.68
CLSTN3-206ENST00000535668 GALNT16Q8N428 558 aa10.83□□□□□ -0.68
CLSTN3-206ENST00000535668 C19orf47Q8N9M1 422 aaKnown RBP10.83□□□□□ -0.68
CLSTN3-206ENST00000535668 OR13C4Q8NGS5 318 aa10.83□□□□□ -0.68
CLSTN3-206ENST00000535668 OR5K2Q8NHB8 316 aa10.83□□□□□ -0.68
CLSTN3-206ENST00000535668 STYXQ8WUJ0 223 aa10.83□□□□□ -0.68
CLSTN3-206ENST00000535668 TM9SF4Q92544 642 aa10.83□□□□□ -0.68
CLSTN3-206ENST00000535668 HAUS1Q96CS2 278 aa10.83□□□□□ -0.68
CLSTN3-206ENST00000535668 CDKN2AIPNLQ96HQ2 116 aa10.83□□□□□ -0.68
CLSTN3-206ENST00000535668 MENTQ9BUN1 341 aa10.83□□□□□ -0.68
CLSTN3-206ENST00000535668 FAM60AQ9NP50 221 aa10.83□□□□□ -0.68
CLSTN3-206ENST00000535668 ACTR10Q9NZ32 417 aa10.83□□□□□ -0.68
CLSTN3-206ENST00000535668 ERRFI1Q9UJM3 462 aaPredicted RBP10.83□□□□□ -0.68
CLSTN3-206ENST00000535668 ICKQ9UPZ9 632 aa10.83□□□□□ -0.68
CLSTN3-206ENST00000535668 HYOU1Q9Y4L1 999 aa10.83□□□□□ -0.68
CLSTN3-206ENST00000535668 PCDHGA10Q9Y5H3 936 aa10.83□□□□□ -0.68
CLSTN3-206ENST00000535668 SNRNP200O75643 2136 aaKnown RBP10.82□□□□□ -0.68
CLSTN3-206ENST00000535668 OTOGQ6ZRI0 2925 aa10.82□□□□□ -0.68
CLSTN3-206ENST00000535668 ERI2A8K979 691 aaKnown RBP10.82□□□□□ -0.68
CLSTN3-206ENST00000535668 STK10O94804 968 aaKnown RBP10.82□□□□□ -0.68
CLSTN3-206ENST00000535668 POLBP06746 335 aa10.82□□□□□ -0.68
CLSTN3-206ENST00000535668 RBP3P10745 1247 aa10.82□□□□□ -0.68
CLSTN3-206ENST00000535668 CTNNA2P26232 953 aa10.82□□□□□ -0.68
CLSTN3-206ENST00000535668 PSMB4P28070 264 aa10.82□□□□□ -0.68
CLSTN3-206ENST00000535668 MAGEA1P43355 309 aa10.82□□□□□ -0.68
CLSTN3-206ENST00000535668 OTUD4Q01804 1114 aaKnown RBP10.82□□□□□ -0.68
CLSTN3-206ENST00000535668 ACVR1Q04771 509 aa10.82□□□□□ -0.68
CLSTN3-206ENST00000535668 ZIC1Q15915 447 aa10.82□□□□□ -0.68
CLSTN3-206ENST00000535668 KAZNQ674X7 775 aa10.82□□□□□ -0.68
CLSTN3-206ENST00000535668 B3GNTL1Q67FW5 361 aaPredicted RBP10.82□□□□□ -0.68
CLSTN3-206ENST00000535668 FBXO38Q6PIJ6 1188 aa10.82□□□□□ -0.68
CLSTN3-206ENST00000535668 UNC5AQ6ZN44 842 aa10.82□□□□□ -0.68
CLSTN3-206ENST00000535668 DET1Q7L5Y6 550 aa10.82□□□□□ -0.68
CLSTN3-206ENST00000535668 SERPINA9Q86WD7 417 aa10.82□□□□□ -0.68
CLSTN3-206ENST00000535668 TMTC1Q8IUR5 882 aa10.82□□□□□ -0.68
CLSTN3-206ENST00000535668 PIANPQ8IYJ0 282 aa10.82□□□□□ -0.68
CLSTN3-206ENST00000535668 TC2NQ8N9U0 490 aa10.82□□□□□ -0.68
CLSTN3-206ENST00000535668 CLEC1AQ8NC01 280 aa10.82□□□□□ -0.68
CLSTN3-206ENST00000535668 PPP4R1Q8TF05 950 aa10.82□□□□□ -0.68
CLSTN3-206ENST00000535668 KRT35Q92764 455 aa10.82□□□□□ -0.68
CLSTN3-206ENST00000535668 LRRC45Q96CN5 670 aa10.82□□□□□ -0.68
CLSTN3-206ENST00000535668 TBL1YQ9BQ87 522 aa10.82□□□□□ -0.68
CLSTN3-206ENST00000535668 OSBPL8Q9BZF1 889 aa10.82□□□□□ -0.68
CLSTN3-206ENST00000535668 P4HTMQ9NXG6 502 aa10.82□□□□□ -0.68
CLSTN3-206ENST00000535668 IL1RAPL1Q9NZN1 696 aa10.82□□□□□ -0.68
CLSTN3-206ENST00000535668 SLC5A6Q9Y289 635 aa10.82□□□□□ -0.68
CLSTN3-206ENST00000535668 CCDC88CQ9P219 2028 aa10.81□□□□□ -0.68
CLSTN3-206ENST00000535668 A0A0J9YY10 115 aa10.81□□□□□ -0.68
CLSTN3-206ENST00000535668 GSAPA4D1B5 854 aa10.81□□□□□ -0.68
CLSTN3-206ENST00000535668 FITM1A5D6W6 292 aa10.81□□□□□ -0.68
CLSTN3-206ENST00000535668 AKR1B15C9JRZ8 316 aaPredicted RBP10.81□□□□□ -0.68
CLSTN3-206ENST00000535668 BHMG1C9JSJ3 638 aaPredicted RBP10.81□□□□□ -0.68
CLSTN3-206ENST00000535668 AGPSO00116 658 aa10.81□□□□□ -0.68
CLSTN3-206ENST00000535668 ZSCAN9O15535 394 aaPredicted RBP10.81□□□□□ -0.68
CLSTN3-206ENST00000535668 KDM1AO60341 852 aa10.81□□□□□ -0.68
CLSTN3-206ENST00000535668 CNOT3O75175 753 aaKnown RBP10.81□□□□□ -0.68
CLSTN3-206ENST00000535668 OR2B3O76000 313 aa10.81□□□□□ -0.68
CLSTN3-206ENST00000535668 TJP3O95049 919 aa10.81□□□□□ -0.68
CLSTN3-206ENST00000535668 UMODP07911 640 aa10.81□□□□□ -0.68
CLSTN3-206ENST00000535668 CHRM5P08912 532 aaPredicted RBP10.81□□□□□ -0.68
CLSTN3-206ENST00000535668 CBSLP0DN79 551 aa10.81□□□□□ -0.68
CLSTN3-206ENST00000535668 UGT2B7P16662 529 aa10.81□□□□□ -0.68
CLSTN3-206ENST00000535668 MMP11P24347 488 aa10.81□□□□□ -0.68
CLSTN3-206ENST00000535668 MC4RP32245 332 aa10.81□□□□□ -0.68
CLSTN3-206ENST00000535668 CBSP35520 551 aa10.81□□□□□ -0.68
CLSTN3-206ENST00000535668 LMAN1P49257 510 aa10.81□□□□□ -0.68
CLSTN3-206ENST00000535668 AIMP2Q13155 320 aaKnown RBP10.81□□□□□ -0.68
CLSTN3-206ENST00000535668 KLF1Q13351 362 aaPredicted RBP10.81□□□□□ -0.68
CLSTN3-206ENST00000535668 KRT33BQ14525 404 aa10.81□□□□□ -0.68
CLSTN3-206ENST00000535668 PTCHD3Q3KNS1 767 aa10.81□□□□□ -0.68
CLSTN3-206ENST00000535668 NKAIN1Q4KMZ8 207 aa10.81□□□□□ -0.68
CLSTN3-206ENST00000535668 DNAJC21Q5F1R6 531 aaKnown RBP10.81□□□□□ -0.68
CLSTN3-206ENST00000535668 RPUSD3Q6P087 351 aaKnown RBP10.81□□□□□ -0.68
CLSTN3-206ENST00000535668 PPP1R32Q7Z5V6 425 aa10.81□□□□□ -0.68
CLSTN3-206ENST00000535668 LRRC57Q8N9N7 239 aa10.81□□□□□ -0.68
CLSTN3-206ENST00000535668 ST6GALNAC3Q8NDV1 305 aa10.81□□□□□ -0.68
CLSTN3-206ENST00000535668 INPP5DQ92835 1189 aa10.81□□□□□ -0.68
CLSTN3-206ENST00000535668 FERD3LQ96RJ6 166 aa10.81□□□□□ -0.68
CLSTN3-206ENST00000535668 TRIM56Q9BRZ2 755 aaKnown RBP10.81□□□□□ -0.68
CLSTN3-206ENST00000535668 LRRC40Q9H9A6 602 aa10.81□□□□□ -0.68
CLSTN3-206ENST00000535668 MRM3Q9HC36 420 aaKnown RBP10.81□□□□□ -0.68
CLSTN3-206ENST00000535668 ATP13A2Q9NQ11 1180 aa10.81□□□□□ -0.68
CLSTN3-206ENST00000535668 SLC22A11Q9NSA0 550 aa10.81□□□□□ -0.68
CLSTN3-206ENST00000535668 PLCL2Q9UPR0 1127 aa10.81□□□□□ -0.68
CLSTN3-206ENST00000535668 ZGRF1Q86YA3 2104 aa10.81□□□□□ -0.68
CLSTN3-206ENST00000535668 MDC1Q14676 2089 aaKnown RBP10.8□□□□□ -0.68
CLSTN3-206ENST00000535668 VSTM2BA6NLU5 285 aa10.8□□□□□ -0.68
CLSTN3-206ENST00000535668 ENO4A6NNW6 628 aa10.8□□□□□ -0.68
CLSTN3-206ENST00000535668 H7C0C1 242 aa10.8□□□□□ -0.68
CLSTN3-206ENST00000535668 PEX12O00623 359 aa10.8□□□□□ -0.68
CLSTN3-206ENST00000535668 ZNF185O15231 689 aa10.8□□□□□ -0.68
CLSTN3-206ENST00000535668 PSMD3O43242 534 aa10.8□□□□□ -0.68
CLSTN3-206ENST00000535668 HCRTR1O43613 425 aa10.8□□□□□ -0.68
CLSTN3-206ENST00000535668 PRICKLE3O43900 615 aaPredicted RBP10.8□□□□□ -0.68
CLSTN3-206ENST00000535668 GPC4O75487 556 aa10.8□□□□□ -0.68
CLSTN3-206ENST00000535668 SUN1O94901 812 aa10.8□□□□□ -0.68
CLSTN3-206ENST00000535668 CLDN1O95832 211 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms